RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 TNFAIP1Q13829 316 aa10.79□□□□□ -0.68
MDC1-204ENST00000422266 PUM3Q15397 648 aaKnown RBP10.79□□□□□ -0.68
MDC1-204ENST00000422266 INTS3Q68E01 1043 aaKnown RBP10.79□□□□□ -0.68
MDC1-204ENST00000422266 RGMBQ6NW40 437 aa10.79□□□□□ -0.68
MDC1-204ENST00000422266 ANKRD44Q8N8A2 993 aa10.79□□□□□ -0.68
MDC1-204ENST00000422266 TDRD7Q8NHU6 1098 aaKnown RBP10.79□□□□□ -0.68
MDC1-204ENST00000422266 CDCA5Q96FF9 252 aa10.79□□□□□ -0.68
MDC1-204ENST00000422266 PPP2R3BQ9Y5P8 575 aa10.79□□□□□ -0.68
MDC1-204ENST00000422266 COL1A1P02452 1464 aaPredicted RBP10.79□□□□□ -0.68
MDC1-204ENST00000422266 FAM205AQ6ZU69 1335 aa10.79□□□□□ -0.68
MDC1-204ENST00000422266 IRS2Q9Y4H2 1338 aa10.79□□□□□ -0.68
MDC1-204ENST00000422266 ADM5C9JUS6 153 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 EYA2O00167 538 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 FOXN1O15353 648 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 CIAO1O76071 339 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 SLC5A1P13866 664 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 ZNF157P51786 506 aaPredicted RBP10.78□□□□□ -0.68
MDC1-204ENST00000422266 ATF7IPQ6VMQ6 1270 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 TNS4Q8IZW8 715 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 MIER1Q8N108 512 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 LPIN2Q92539 896 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 SERPINA10Q9UK55 444 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 SUGT1Q9Y2Z0 365 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 MAST3O60307 1309 aa10.78□□□□□ -0.68
MDC1-204ENST00000422266 UNCXA6NJT0 531 aa10.77□□□□□ -0.69
MDC1-204ENST00000422266 RBM5P52756 815 aaKnown RBP eCLIP10.77□□□□□ -0.69
MDC1-204ENST00000422266 NBPF9Q3BBW0 867 aa10.77□□□□□ -0.69
MDC1-204ENST00000422266 MFSD14BQ5SR56 506 aa10.77□□□□□ -0.69
MDC1-204ENST00000422266 COL13A1Q5TAT6 717 aaPredicted RBP10.77□□□□□ -0.69
MDC1-204ENST00000422266 ARMC9Q7Z3E5 817 aa10.77□□□□□ -0.69
MDC1-204ENST00000422266 FBXO33Q7Z6M2 555 aa10.77□□□□□ -0.69
MDC1-204ENST00000422266 FAM84BQ96KN1 310 aaPredicted RBP10.77□□□□□ -0.69
MDC1-204ENST00000422266 PUS3Q9BZE2 481 aaKnown RBP10.77□□□□□ -0.69
MDC1-204ENST00000422266 GNL3LQ9NVN8 582 aaKnown RBP10.77□□□□□ -0.69
MDC1-204ENST00000422266 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.69
MDC1-204ENST00000422266 SNAP23O00161 211 aa10.76□□□□□ -0.69
MDC1-204ENST00000422266 IL15P40933 162 aaPredicted RBP10.76□□□□□ -0.69
MDC1-204ENST00000422266 HDLBPQ00341 1268 aaKnown RBP10.76□□□□□ -0.69
MDC1-204ENST00000422266 PTPN12Q05209 780 aaKnown RBP10.76□□□□□ -0.69
MDC1-204ENST00000422266 SUPT20HL1Q3ZLR7 823 aa10.76□□□□□ -0.69
MDC1-204ENST00000422266 LRRC24Q50LG9 513 aa10.76□□□□□ -0.69
MDC1-204ENST00000422266 VGLL2Q8N8G2 317 aa10.76□□□□□ -0.69
MDC1-204ENST00000422266 MXD3Q9BW11 206 aa10.76□□□□□ -0.69
MDC1-204ENST00000422266 MRIQ9BWK5 157 aa10.76□□□□□ -0.69
MDC1-204ENST00000422266 POLR2AP24928 1970 aaKnown RBP10.76□□□□□ -0.69
MDC1-204ENST00000422266 SPDYE2BA6NHP3 402 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 PPP1R12BO60237 982 aaPredicted RBP10.75□□□□□ -0.69
MDC1-204ENST00000422266 SPDYE6P0CI01 402 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 GYG1P46976 350 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 TTLL12Q14166 644 aaPredicted RBP10.75□□□□□ -0.69
MDC1-204ENST00000422266 CFAP100Q494V2 611 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 ZKSCAN2Q63HK3 967 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 WDR66Q8TBY9 1149 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 FRAT1Q92837 279 aaPredicted RBP10.75□□□□□ -0.69
MDC1-204ENST00000422266 ZBED3Q96IU2 234 aaPredicted RBP10.75□□□□□ -0.69
MDC1-204ENST00000422266 SAGE1Q9NXZ1 904 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 TTF2Q9UNY4 1162 aaKnown RBP10.75□□□□□ -0.69
MDC1-204ENST00000422266 AKAP2Q9Y2D5 859 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 THSD7BQ9C0I4 1608 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 PAPPA2Q9BXP8 1791 aa10.75□□□□□ -0.69
MDC1-204ENST00000422266 F8W031 263 aaPredicted RBP10.74□□□□□ -0.69
MDC1-204ENST00000422266 SEMA3EO15041 775 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 ZBTB22O15209 634 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 GNAI2P04899 355 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 SLC10A3P09131 477 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 MS4A1P11836 297 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 TRIM27P14373 513 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 FGFR2P21802 821 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 RFX5P48382 616 aaPredicted RBP10.74□□□□□ -0.69
MDC1-204ENST00000422266 TNNI2P48788 182 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 LBX1P52954 281 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 MTX1Q13505 466 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 FTSJ3Q8IY81 847 aaKnown RBP10.74□□□□□ -0.69
MDC1-204ENST00000422266 ZGPATQ8N5A5 531 aaKnown RBP10.74□□□□□ -0.69
MDC1-204ENST00000422266 CERS5Q8N5B7 392 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 HOOK2Q96ED9 719 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 DEFB129Q9H1M3 183 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 COPRSQ9NQ92 184 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 TMOD2Q9NZR1 351 aa10.74□□□□□ -0.69
MDC1-204ENST00000422266 LRRFIP2Q9Y608 721 aaKnown RBP10.74□□□□□ -0.69
MDC1-204ENST00000422266 ASTN2O75129 1339 aaPredicted RBP10.74□□□□□ -0.69
MDC1-204ENST00000422266 A0A1B0GUL6 1792 aa10.73□□□□□ -0.69
MDC1-204ENST00000422266 AOC2O75106 756 aa10.73□□□□□ -0.69
MDC1-204ENST00000422266 HSPA8P11142 646 aaKnown RBP10.73□□□□□ -0.69
MDC1-204ENST00000422266 ATP2B3Q16720 1220 aa10.73□□□□□ -0.69
MDC1-204ENST00000422266 KLHDC4Q8TBB5 520 aa10.73□□□□□ -0.69
MDC1-204ENST00000422266 TEKT1Q969V4 418 aa10.73□□□□□ -0.69
MDC1-204ENST00000422266 MEIS3Q99687 375 aa10.73□□□□□ -0.69
MDC1-204ENST00000422266 FAM155AB1AL88 458 aaPredicted RBP10.72□□□□□ -0.69
MDC1-204ENST00000422266 SRGAP3O43295 1099 aa10.72□□□□□ -0.69
MDC1-204ENST00000422266 IREB2P48200 963 aaKnown RBP10.72□□□□□ -0.69
MDC1-204ENST00000422266 BCAMP50895 628 aa10.72□□□□□ -0.69
MDC1-204ENST00000422266 INHBEP58166 350 aa10.72□□□□□ -0.69
MDC1-204ENST00000422266 SREBF2Q12772 1141 aa10.72□□□□□ -0.69
MDC1-204ENST00000422266 CHAF1AQ13111 956 aaPredicted RBP10.72□□□□□ -0.69
MDC1-204ENST00000422266 ATG9AQ7Z3C6 839 aa10.72□□□□□ -0.69
MDC1-204ENST00000422266 DZIP1LQ8IYY4 767 aaKnown RBP10.72□□□□□ -0.69
MDC1-204ENST00000422266 SIL1Q9H173 461 aa10.72□□□□□ -0.69
MDC1-204ENST00000422266 VEZTQ9HBM0 779 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms