RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 TLDC2A0PJX2 215 aa15.27■□□□□ 0.03
COL20A1-203ENST00000422202 GNAQP50148 359 aa15.27■□□□□ 0.03
COL20A1-203ENST00000422202 TMTC2Q8N394 836 aa15.27■□□□□ 0.03
COL20A1-203ENST00000422202 STMN2Q93045 179 aa15.27■□□□□ 0.03
COL20A1-203ENST00000422202 RSPH14Q9UHP6 348 aa15.27■□□□□ 0.03
COL20A1-203ENST00000422202 FAM184BQ9ULE4 1060 aa15.27■□□□□ 0.03
COL20A1-203ENST00000422202 NSMCE1Q8WV22 266 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
COL20A1-203ENST00000422202 GTF3C6Q969F1 213 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 ZSCAN16Q9H4T2 348 aaPredicted RBP15.26■□□□□ 0.03
COL20A1-203ENST00000422202 ARFGAP3Q9NP61 516 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 SBNO2Q9Y2G9 1366 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 SSFA2P28290 1259 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 MAGEB6Q8N7X4 407 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 GBP7Q8N8V2 638 aaPredicted RBP15.26■□□□□ 0.03
COL20A1-203ENST00000422202 CAMSAP2Q08AD1 1489 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 PTPRCP08575 1304 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 TRPC3Q13507 836 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 GIMAP6Q6P9H5 292 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL20A1-203ENST00000422202 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 SEL1L2Q5TEA6 688 aa15.26■□□□□ 0.03
COL20A1-203ENST00000422202 SAP30BPQ9UHR5 308 aaKnown RBP15.26■□□□□ 0.03
COL20A1-203ENST00000422202 KCNA4P22459 653 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 CHRNA2Q15822 529 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 CCDC125Q86Z20 511 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 UBE2HP62256 183 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 ANO6Q4KMQ2 910 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 IFNL2Q8IZJ0 200 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 AFAP1L2Q8N4X5 818 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 CTAGE15A4D2H0 777 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 CTAGE8P0CG41 777 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 CASC4Q6P4E1 433 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 CTAGE6Q86UF2 777 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 CTAGE4Q8IX94 777 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 NUF2Q9BZD4 464 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 MCM9Q9NXL9 1143 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 PAXBP1Q9Y5B6 917 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 GTF2A1P52655 376 aaPredicted RBP15.25■□□□□ 0.03
COL20A1-203ENST00000422202 MAEAQ7L5Y9 396 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 FAM200AQ8TCP9 573 aa15.25■□□□□ 0.03
COL20A1-203ENST00000422202 PRG4Q92954 1404 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-203ENST00000422202 CHMP2AO43633 222 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 NECAB1Q8N987 351 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 BICDL2A1A5D9 508 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 SPDYE16A6NNV3 312 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-203ENST00000422202 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 SDCCAG8Q86SQ7 713 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-203ENST00000422202 MTRF1LQ9UGC7 380 aaKnown RBP15.24■□□□□ 0.03
COL20A1-203ENST00000422202 MTUS1Q9ULD2 1270 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 STRN3Q13033 797 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 GABPB2Q8TAK5 448 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-203ENST00000422202 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 CLGNO14967 610 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 ABL1P00519 1130 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 SETDB1Q15047 1291 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 KRT79Q5XKE5 535 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 LEO1Q8WVC0 666 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-203ENST00000422202 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL20A1-203ENST00000422202 CLUL1Q15846 466 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 DTHD1Q6ZMT9 781 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 LRRC9Q6ZRR7 1453 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 C11orf95C9JLR9 678 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-203ENST00000422202 M0QZ92 97 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 EPB41P11171 864 aaKnown RBP15.24■□□□□ 0.03
COL20A1-203ENST00000422202 PLEKHH2Q8IVE3 1493 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 ECHDC1Q9NTX5 307 aa15.24■□□□□ 0.03
COL20A1-203ENST00000422202 XRCC6P12956 609 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL20A1-203ENST00000422202 GKAP1Q5VSY0 366 aaPredicted RBP15.23■□□□□ 0.03
COL20A1-203ENST00000422202 CDAN1Q8IWY9 1227 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 RIOK1Q9BRS2 568 aaKnown RBP15.23■□□□□ 0.03
COL20A1-203ENST00000422202 C4orf50Q6ZRC1 276 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 BMP15O95972 392 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 Q6ZUG5 572 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 MICALL1Q8N3F8 863 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 TSGA10Q9BZW7 698 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
COL20A1-203ENST00000422202 IVNS1ABPQ9Y6Y0 642 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 SNRPA1P09661 255 aaKnown RBP15.23■□□□□ 0.03
COL20A1-203ENST00000422202 SMTNP53814 917 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 MIPOL1Q8TD10 442 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 GUCA1BQ9UMX6 200 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 NME9Q86XW9 330 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 FMNL3Q8IVF7 1028 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 INTS8Q75QN2 995 aaKnown RBP15.23■□□□□ 0.03
COL20A1-203ENST00000422202 GPR161Q8N6U8 529 aaKnown RBP15.23■□□□□ 0.03
COL20A1-203ENST00000422202 KCNG4Q8TDN1 519 aa15.23■□□□□ 0.03
COL20A1-203ENST00000422202 KRT86O43790 486 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 CCT6AP40227 531 aaKnown RBP15.22■□□□□ 0.03
COL20A1-203ENST00000422202 CHST3Q7LGC8 479 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 KRT83P78385 493 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 DACT3Q96B18 629 aaPredicted RBP15.22■□□□□ 0.03
COL20A1-203ENST00000422202 IFT74Q96LB3 600 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 NSFL1CQ9UNZ2 370 aaKnown RBP15.22■□□□□ 0.03
COL20A1-203ENST00000422202 ZFYP08048 801 aaPredicted RBP15.22■□□□□ 0.03
COL20A1-203ENST00000422202 PLCB4Q15147 1175 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 CCDC42Q96M95 316 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 SAMD15Q9P1V8 674 aa15.22■□□□□ 0.03
COL20A1-203ENST00000422202 WDR46O15213 610 aaKnown RBP15.22■□□□□ 0.03
COL20A1-203ENST00000422202 CCDC171Q6TFL3 1326 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms