RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 EPB41L2O43491 1005 aaKnown RBP15.63■□□□□ 0.09
MCF2L-213ENST00000421756 ARMT1Q9H993 441 aa15.63■□□□□ 0.09
MCF2L-213ENST00000421756 MAGEB6Q8N7X4 407 aa15.63■□□□□ 0.09
MCF2L-213ENST00000421756 TMEM87AQ8NBN3 555 aa15.63■□□□□ 0.09
MCF2L-213ENST00000421756 TTLL11Q8NHH1 800 aa15.63■□□□□ 0.09
MCF2L-213ENST00000421756 FAM200AQ8TCP9 573 aa15.63■□□□□ 0.09
MCF2L-213ENST00000421756 KCNB2Q92953 911 aa15.63■□□□□ 0.09
MCF2L-213ENST00000421756 CARD10Q9BWT7 1032 aa15.63■□□□□ 0.09
MCF2L-213ENST00000421756 TRMT1Q9NXH9 659 aaKnown RBP15.63■□□□□ 0.09
MCF2L-213ENST00000421756 ZNF532Q9HCE3 1301 aa15.63■□□□□ 0.09
MCF2L-213ENST00000421756 LETM1O95202 739 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-213ENST00000421756 NLRP10Q86W26 655 aa15.62■□□□□ 0.09
MCF2L-213ENST00000421756 ATP6V1AP38606 617 aa15.62■□□□□ 0.09
MCF2L-213ENST00000421756 BCAMP50895 628 aa15.62■□□□□ 0.09
MCF2L-213ENST00000421756 HELLSQ9NRZ9 838 aa15.62■□□□□ 0.09
MCF2L-213ENST00000421756 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
MCF2L-213ENST00000421756 SYNE3Q6ZMZ3 975 aa15.62■□□□□ 0.09
MCF2L-213ENST00000421756 CFAP45Q9UL16 551 aa15.62■□□□□ 0.09
MCF2L-213ENST00000421756 AKAP2Q9Y2D5 859 aa15.62■□□□□ 0.09
MCF2L-213ENST00000421756 KDM3BQ7LBC6 1761 aa15.61■□□□□ 0.09
MCF2L-213ENST00000421756 PRDM1O75626 825 aa15.61■□□□□ 0.09
MCF2L-213ENST00000421756 PFKFB2O60825 505 aa15.61■□□□□ 0.09
MCF2L-213ENST00000421756 CCDC102BQ68D86 513 aa15.61■□□□□ 0.09
MCF2L-213ENST00000421756 ZBTB38Q8NAP3 1195 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-213ENST00000421756 CAMTA1Q9Y6Y1 1673 aa15.6■□□□□ 0.09
MCF2L-213ENST00000421756 FDPSP14324 419 aaKnown RBP15.6■□□□□ 0.09
MCF2L-213ENST00000421756 KCNF1Q9H3M0 494 aa15.6■□□□□ 0.09
MCF2L-213ENST00000421756 LRP2BPQ9P2M1 347 aa15.6■□□□□ 0.09
MCF2L-213ENST00000421756 MBD4O95243 580 aa15.6■□□□□ 0.09
MCF2L-213ENST00000421756 MCM5P33992 734 aa15.6■□□□□ 0.09
MCF2L-213ENST00000421756 GIGYF2Q6Y7W6 1299 aaKnown RBP15.6■□□□□ 0.09
MCF2L-213ENST00000421756 TBC1D10CQ8IV04 446 aa15.6■□□□□ 0.09
MCF2L-213ENST00000421756 ISCA1Q9BUE6 129 aa15.6■□□□□ 0.09
MCF2L-213ENST00000421756 CLIP2Q9UDT6 1046 aa15.6■□□□□ 0.09
MCF2L-213ENST00000421756 KCNQ2O43526 872 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 AOPEPQ8N6M6 819 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 NCOA7Q8NI08 942 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 FUCA2Q9BTY2 467 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 BAZ2BQ9UIF8 2168 aaKnown RBP15.59■□□□□ 0.09
MCF2L-213ENST00000421756 TDO2P48775 406 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 CTSWP56202 376 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 PDILTQ8N807 584 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 DSCC1Q9BVC3 393 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 NIP7Q9Y221 180 aaKnown RBP eCLIP15.59■□□□□ 0.09
MCF2L-213ENST00000421756 ZNF500O60304 480 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-213ENST00000421756 CYB5R4Q7L1T6 521 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 CLSTN2Q9H4D0 955 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 PRDM10Q9NQV6 1147 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 PCDHA7Q9UN72 937 aa15.59■□□□□ 0.09
MCF2L-213ENST00000421756 SLIT3O75094 1523 aa15.58■□□□□ 0.09
MCF2L-213ENST00000421756 HMGB1P09429 215 aaKnown RBP15.58■□□□□ 0.08
MCF2L-213ENST00000421756 SDR42E1Q8WUS8 393 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 APPBP2Q92624 585 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 ZBTB9Q96C00 473 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 IL17RAQ96F46 866 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 SLC26A6Q9BXS9 759 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 NAPBQ9H115 298 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 MAP3K15Q6ZN16 1313 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 FOXP2O15409 715 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 SMC2O95347 1197 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 NDUFA8P51970 172 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 SUSD4Q5VX71 490 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 CREBRFQ8IUR6 639 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 CLIC6Q96NY7 704 aa15.58■□□□□ 0.08
MCF2L-213ENST00000421756 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.58■□□□□ 0.08
MCF2L-213ENST00000421756 KIF28PB7ZC32 967 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 IFIT3O14879 490 aaKnown RBP15.57■□□□□ 0.08
MCF2L-213ENST00000421756 PCCAP05165 728 aaPredicted RBP15.57■□□□□ 0.08
MCF2L-213ENST00000421756 EXOSC10Q01780 885 aaKnown RBP15.57■□□□□ 0.08
MCF2L-213ENST00000421756 DDX19AQ9NUU7 478 aaKnown RBP15.57■□□□□ 0.08
MCF2L-213ENST00000421756 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.57■□□□□ 0.084e-7■■□□□ 14
MCF2L-213ENST00000421756 CTNNA3Q9UI47 895 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 V9GYY5 206 aaPredicted RBP15.57■□□□□ 0.08
MCF2L-213ENST00000421756 C5P01031 1676 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 SH3TC1Q8TE82 1336 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 CYP2D7A0A087X1C5 515 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 METAP2P50579 478 aaKnown RBP eCLIP15.57■□□□□ 0.08
MCF2L-213ENST00000421756 ANTXR2P58335 489 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 RAI14Q9P0K7 980 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 KCNJ14Q9UNX9 436 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 KIF3AQ9Y496 699 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 TMEM67Q5HYA8 995 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 VPS37DQ86XT2 251 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 ALG1Q9BT22 464 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 LMO7Q8WWI1 1683 aa15.57■□□□□ 0.08
MCF2L-213ENST00000421756 TPM2P07951 284 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 GYG1P46976 350 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 UVSSAQ2YD98 709 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 CARMIL3Q8ND23 1372 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 PDE6AP16499 860 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 CHAF1AQ13111 956 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-213ENST00000421756 CCDC144BQ3MJ40 725 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 HS1BP3Q53T59 392 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 ZNF396Q96N95 335 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-213ENST00000421756 OVOS2A0A0G2JMS6 1433 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 HMGN5P82970 282 aaKnown RBP15.56■□□□□ 0.08
MCF2L-213ENST00000421756 ILDR1Q86SU0 546 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-213ENST00000421756 RIPOR2Q9Y4F9 1068 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 UBN2Q6ZU65 1347 aa15.56■□□□□ 0.08
MCF2L-213ENST00000421756 GOLGA6L6A8MZA4 724 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms