RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 H7C1D1 291 aa17.81■□□□□ 0.44
PTPN18-204ENST00000420717 TNNI3KQ59H18 835 aa17.81■□□□□ 0.44
PTPN18-204ENST00000420717 VPS37DQ86XT2 251 aa17.81■□□□□ 0.44
PTPN18-204ENST00000420717 ZC3H15Q8WU90 426 aaKnown RBP17.81■□□□□ 0.44
PTPN18-204ENST00000420717 TBC1D22AQ8WUA7 517 aa17.81■□□□□ 0.44
PTPN18-204ENST00000420717 FPGT-TNNI3KV9GXZ4 949 aa17.81■□□□□ 0.44
PTPN18-204ENST00000420717 SALL1Q9NSC2 1324 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 SHTN1A0MZ66 631 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 USP17L8P0C7I0 530 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 POTEIP0CG38 1075 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 ADORA1P30542 326 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 CHADLQ6NUI6 762 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 TRPM4Q8TD43 1214 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 XAGE2Q96GT9 111 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 EXOC6BQ9Y2D4 811 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 SUGT1Q9Y2Z0 365 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 AKAP11Q9UKA4 1901 aa17.8■□□□□ 0.44
PTPN18-204ENST00000420717 RAB11FIP3O75154 756 aa17.79■□□□□ 0.44
PTPN18-204ENST00000420717 ARID4AP29374 1257 aaPredicted RBP17.79■□□□□ 0.44
PTPN18-204ENST00000420717 PHKA1P46020 1223 aa17.79■□□□□ 0.44
PTPN18-204ENST00000420717 TIMM10P62072 90 aa17.79■□□□□ 0.44
PTPN18-204ENST00000420717 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
PTPN18-204ENST00000420717 CCDC102BQ68D86 513 aa17.79■□□□□ 0.44
PTPN18-204ENST00000420717 MTMR14Q8NCE2 650 aa17.79■□□□□ 0.44
PTPN18-204ENST00000420717 GNL3LQ9NVN8 582 aaKnown RBP17.79■□□□□ 0.44
PTPN18-204ENST00000420717 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
PTPN18-204ENST00000420717 PCDHB15Q9Y5E8 787 aa17.79■□□□□ 0.44
PTPN18-204ENST00000420717 HIRAP54198 1017 aaPredicted RBP17.78■□□□□ 0.44
PTPN18-204ENST00000420717 MFSD14BQ5SR56 506 aa17.78■□□□□ 0.44
PTPN18-204ENST00000420717 RHPN1Q8TCX5 695 aa17.78■□□□□ 0.44
PTPN18-204ENST00000420717 KIF1BPQ96EK5 621 aa17.78■□□□□ 0.44
PTPN18-204ENST00000420717 ZBED3Q96IU2 234 aaPredicted RBP17.78■□□□□ 0.44
PTPN18-204ENST00000420717 ZNF512BQ96KM6 892 aaPredicted RBP17.78■□□□□ 0.44
PTPN18-204ENST00000420717 MXD3Q9BW11 206 aa17.78■□□□□ 0.44
PTPN18-204ENST00000420717 MYOZ2Q9NPC6 264 aa17.78■□□□□ 0.44
PTPN18-204ENST00000420717 MAST2Q6P0Q8 1798 aa17.78■□□□□ 0.44
PTPN18-204ENST00000420717 EGFRP00533 1210 aa17.77■□□□□ 0.44
PTPN18-204ENST00000420717 KIF4BQ2VIQ3 1234 aa17.77■□□□□ 0.44
PTPN18-204ENST00000420717 WDR66Q8TBY9 1149 aa17.77■□□□□ 0.44
PTPN18-204ENST00000420717 DCTPP1Q9H773 170 aa17.77■□□□□ 0.44
PTPN18-204ENST00000420717 DENND2AQ9ULE3 1009 aa17.77■□□□□ 0.44
PTPN18-204ENST00000420717 PASKQ96RG2 1323 aa17.76■□□□□ 0.43
PTPN18-204ENST00000420717 RASGRF1Q13972 1273 aa17.76■□□□□ 0.43
PTPN18-204ENST00000420717 EAPPQ56P03 285 aaPredicted RBP17.76■□□□□ 0.43
PTPN18-204ENST00000420717 SAMD7Q7Z3H4 446 aa17.76■□□□□ 0.43
PTPN18-204ENST00000420717 OGFOD1Q8N543 542 aa17.76■□□□□ 0.43
PTPN18-204ENST00000420717 FBXW7Q969H0 707 aa17.76■□□□□ 0.43
PTPN18-204ENST00000420717 EAF2Q96CJ1 260 aaPredicted RBP17.76■□□□□ 0.43
PTPN18-204ENST00000420717 DBNLQ9UJU6 430 aaKnown RBP17.76■□□□□ 0.43
PTPN18-204ENST00000420717 PITPNM2Q9BZ72 1349 aa17.75■□□□□ 0.43
PTPN18-204ENST00000420717 ITGBL1O95965 494 aaPredicted RBP17.75■□□□□ 0.43
PTPN18-204ENST00000420717 HDLBPQ00341 1268 aaKnown RBP17.75■□□□□ 0.43
PTPN18-204ENST00000420717 HDAC1Q13547 482 aaPredicted RBP17.75■□□□□ 0.43
PTPN18-204ENST00000420717 KIAA0825Q8IV33 1275 aa17.75■□□□□ 0.43
PTPN18-204ENST00000420717 MRIQ9BWK5 157 aa17.75■□□□□ 0.43
PTPN18-204ENST00000420717 SERPINA10Q9UK55 444 aa17.75■□□□□ 0.43
PTPN18-204ENST00000420717 HDAC9Q9UKV0 1011 aa17.75■□□□□ 0.43
PTPN18-204ENST00000420717 IQSEC3Q9UPP2 1182 aaPredicted RBP17.75■□□□□ 0.43
PTPN18-204ENST00000420717 TRPM7Q96QT4 1865 aa17.75■□□□□ 0.43
PTPN18-204ENST00000420717 DOCK2Q92608 1830 aa17.75■□□□□ 0.43
PTPN18-204ENST00000420717 UQCRFS1P1P0C7P4 283 aa17.74■□□□□ 0.43
PTPN18-204ENST00000420717 TBC1D10BQ4KMP7 808 aaPredicted RBP17.74■□□□□ 0.43
PTPN18-204ENST00000420717 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
PTPN18-204ENST00000420717 DBNDD2Q9BQY9 259 aa17.74■□□□□ 0.43
PTPN18-204ENST00000420717 MAST3O60307 1309 aa17.73■□□□□ 0.43
PTPN18-204ENST00000420717 IGSF3O75054 1194 aa17.73■□□□□ 0.43
PTPN18-204ENST00000420717 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
PTPN18-204ENST00000420717 JAG2Q9Y219 1238 aa17.73■□□□□ 0.43
PTPN18-204ENST00000420717 WNT10BO00744 389 aa17.72■□□□□ 0.43
PTPN18-204ENST00000420717 CHAF1AQ13111 956 aaPredicted RBP17.72■□□□□ 0.43
PTPN18-204ENST00000420717 CLASRPQ8N2M8 674 aaKnown RBP17.72■□□□□ 0.43
PTPN18-204ENST00000420717 ZGPATQ8N5A5 531 aaKnown RBP17.72■□□□□ 0.43
PTPN18-204ENST00000420717 LRRCC1Q9C099 1032 aa17.72■□□□□ 0.43
PTPN18-204ENST00000420717 TLR7Q9NYK1 1049 aaKnown RBP17.72■□□□□ 0.43
PTPN18-204ENST00000420717 HMG20BQ9P0W2 317 aa17.72■□□□□ 0.43
PTPN18-204ENST00000420717 SPDYE2BA6NHP3 402 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 SPDYE6P0CI01 402 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 HSPA6P17066 643 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 MCAMP43121 646 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 GRIK5Q16478 980 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 CCDC158Q5M9N0 1113 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 GORABQ5T7V8 394 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 MAP1SQ66K74 1059 aaPredicted RBP17.71■□□□□ 0.43
PTPN18-204ENST00000420717 AACSQ86V21 672 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 CNTROBQ8N137 903 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.43
PTPN18-204ENST00000420717 TTF2Q9UNY4 1162 aaKnown RBP17.71■□□□□ 0.43
PTPN18-204ENST00000420717 POLR2AP24928 1970 aaKnown RBP17.71■□□□□ 0.43
PTPN18-204ENST00000420717 SCARF1Q14162 830 aa17.7■□□□□ 0.42
PTPN18-204ENST00000420717 SPATA5Q8NB90 893 aa17.7■□□□□ 0.42
PTPN18-204ENST00000420717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTPN18-204ENST00000420717 IL1RAPL2Q9NP60 686 aa17.7■□□□□ 0.42
PTPN18-204ENST00000420717 GGA3Q9NZ52 723 aa17.7■□□□□ 0.42
PTPN18-204ENST00000420717 CLEC11AQ9Y240 323 aa17.7■□□□□ 0.42
PTPN18-204ENST00000420717 NBPF9Q3BBW0 867 aa17.69■□□□□ 0.42
PTPN18-204ENST00000420717 CFAP100Q494V2 611 aa17.69■□□□□ 0.42
PTPN18-204ENST00000420717 HHIPL2Q6UWX4 724 aa17.69■□□□□ 0.42
PTPN18-204ENST00000420717 CDC37L1Q7L3B6 337 aa17.69■□□□□ 0.42
PTPN18-204ENST00000420717 MYH2Q9UKX2 1941 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms