RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 ZNF438Q7Z4V0 828 aa6.75□□□□□ -1.33
SEMA3A-202ENST00000420047 ABI1Q8IZP0 508 aa6.75□□□□□ -1.33
SEMA3A-202ENST00000420047 PMEPA1Q969W9 287 aa6.75□□□□□ -1.33
SEMA3A-202ENST00000420047 DZANK1Q9NVP4 752 aa6.75□□□□□ -1.33
SEMA3A-202ENST00000420047 MSMPQ1L6U9 139 aa6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 NUTM2GQ5VZR2 741 aa6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 SMG8Q8ND04 991 aaKnown RBP6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 STK32AQ8WU08 396 aa6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 SLC7A3Q8WY07 619 aa6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 NUDT16Q96DE0 195 aaKnown RBP6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 FBXL18Q96ME1 805 aa6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 SUGCTQ9HAC7 445 aa6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 CNTN3Q9P232 1028 aa6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 SOX13Q9UN79 622 aa6.74□□□□□ -1.33
SEMA3A-202ENST00000420047 F13BP05160 661 aa6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 CES1P23141 567 aa6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 TMEM102Q8N9M5 508 aaPredicted RBP6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 METTL22Q9BUU2 404 aaPredicted RBP6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 OSBPL1AQ9BXW6 950 aa6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 TMPRSS13Q9BYE2 586 aa6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 CYP4F12Q9HCS2 524 aa6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 KANSL3Q9P2N6 904 aa6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 CCDC39Q9UFE4 941 aa6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 ZNF777Q9ULD5 760 aaPredicted RBP6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 ARID1BQ8NFD5 2236 aaPredicted RBP6.73□□□□□ -1.33
SEMA3A-202ENST00000420047 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 TIAF1O95411 115 aa6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 RXRBP28702 533 aa6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 TMEM132AQ24JP5 1023 aa6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 SGO2Q562F6 1265 aa6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 CBLL1Q75N03 491 aa6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 C1orf127Q8N9H9 656 aa6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 C12orf50Q8NA57 414 aaPredicted RBP6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 CLP1Q92989 425 aaKnown RBP6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 ASIC4Q96FT7 647 aa6.72□□□□□ -1.33
SEMA3A-202ENST00000420047 FAM95CA0A1B0GW59 222 aa6.71□□□□□ -1.34
SEMA3A-202ENST00000420047 ATG7O95352 703 aa6.71□□□□□ -1.34
SEMA3A-202ENST00000420047 PCSK2P16519 638 aa6.71□□□□□ -1.34
SEMA3A-202ENST00000420047 SRPK2P78362 688 aaKnown RBP6.71□□□□□ -1.34
SEMA3A-202ENST00000420047 PAOXQ6QHF9 649 aa6.71□□□□□ -1.34
SEMA3A-202ENST00000420047 VSIG10LQ86VR7 867 aa6.71□□□□□ -1.34
SEMA3A-202ENST00000420047 FBXL6Q8N531 539 aa6.71□□□□□ -1.34
SEMA3A-202ENST00000420047 BSNDQ8WZ55 320 aa6.71□□□□□ -1.34
SEMA3A-202ENST00000420047 SOX17Q9H6I2 414 aaPredicted RBP6.71□□□□□ -1.34
SEMA3A-202ENST00000420047 SOX1O00570 391 aaPredicted RBP6.7□□□□□ -1.34
SEMA3A-202ENST00000420047 IKBKEQ14164 716 aa6.7□□□□□ -1.34
SEMA3A-202ENST00000420047 OGFOD2Q6N063 350 aa6.7□□□□□ -1.34
SEMA3A-202ENST00000420047 POU5F2Q8N7G0 328 aa6.7□□□□□ -1.34
SEMA3A-202ENST00000420047 NXPE3Q969Y0 559 aa6.7□□□□□ -1.34
SEMA3A-202ENST00000420047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.7□□□□□ -1.34
SEMA3A-202ENST00000420047 ACPPP15309 386 aa6.69□□□□□ -1.34
SEMA3A-202ENST00000420047 JUNBP17275 347 aaPredicted RBP6.69□□□□□ -1.34
SEMA3A-202ENST00000420047 USP11P51784 963 aa6.69□□□□□ -1.34
SEMA3A-202ENST00000420047 EXOSC6Q5RKV6 272 aaKnown RBP6.69□□□□□ -1.34
SEMA3A-202ENST00000420047 TTC16Q8NEE8 873 aa6.69□□□□□ -1.34
SEMA3A-202ENST00000420047 BSDC1Q9NW68 430 aaPredicted RBP6.69□□□□□ -1.34
SEMA3A-202ENST00000420047 LOC100289279A0A1B0GTE1 492 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 CYP26A1O43174 497 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 ITGB5P18084 799 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 JAG1P78504 1218 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 NFKBIBQ15653 356 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 TMEM164Q5U3C3 297 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 HGSNATQ68CP4 663 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 VN1R5Q7Z5H4 357 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 ATCAYQ86WG3 371 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 TP53INP2Q8IXH6 220 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 HHIPQ96QV1 700 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 OSMRQ99650 979 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 YIPF2Q9BWQ6 316 aa6.68□□□□□ -1.34
SEMA3A-202ENST00000420047 TRPA1O75762 1119 aa6.67□□□□□ -1.34
SEMA3A-202ENST00000420047 NFXL1Q6ZNB6 911 aa6.67□□□□□ -1.34
SEMA3A-202ENST00000420047 AGBL5Q8NDL9 886 aa6.67□□□□□ -1.34
SEMA3A-202ENST00000420047 EDEM1Q92611 657 aa6.67□□□□□ -1.34
SEMA3A-202ENST00000420047 EZH1Q92800 747 aaPredicted RBP6.67□□□□□ -1.34
SEMA3A-202ENST00000420047 USP26Q9BXU7 913 aa6.67□□□□□ -1.34
SEMA3A-202ENST00000420047 CHRDQ9H2X0 955 aa6.67□□□□□ -1.34
SEMA3A-202ENST00000420047 GGNBP2Q9H3C7 697 aa6.67□□□□□ -1.34
SEMA3A-202ENST00000420047 PDGFAP04085 211 aa6.66□□□□□ -1.34
SEMA3A-202ENST00000420047 EDN3P14138 238 aa6.66□□□□□ -1.34
SEMA3A-202ENST00000420047 MZF1P28698 734 aaPredicted RBP6.66□□□□□ -1.34
SEMA3A-202ENST00000420047 DNM1Q05193 864 aaKnown RBP6.66□□□□□ -1.34
SEMA3A-202ENST00000420047 ZAR1Q86SH2 424 aa6.66□□□□□ -1.34
SEMA3A-202ENST00000420047 FBLIM1Q8WUP2 373 aa6.66□□□□□ -1.34
SEMA3A-202ENST00000420047 PRKAG2Q9UGJ0 569 aa6.66□□□□□ -1.34
SEMA3A-202ENST00000420047 DLGAP3O95886 979 aa6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 C8AP07357 584 aa6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 DRD2P14416 443 aa6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 SOX4Q06945 474 aaPredicted RBP6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 C8orf34Q49A92 452 aa6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 NOM1Q5C9Z4 860 aaKnown RBP6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 CDPF1Q6NVV7 123 aa6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 C2CD4AQ8NCU7 369 aaPredicted RBP6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 HELQQ8TDG4 1101 aa6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 TBC1D32Q96NH3 1257 aa6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 ZKSCAN3Q9BRR0 538 aa6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 BHLHE41Q9C0J9 482 aaPredicted RBP6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 SEPT3Q9UH03 358 aa6.65□□□□□ -1.34
SEMA3A-202ENST00000420047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.64□□□□□ -1.35
SEMA3A-202ENST00000420047 ATP2B4P23634 1241 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms