RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 DLGAP5Q15398 846 aa23.17■■□□□ 1.3
VPS16-204ENST00000417508 USP44Q9H0E7 712 aa23.17■■□□□ 1.3
VPS16-204ENST00000417508 KIF23Q02241 960 aaPredicted RBP23.16■■□□□ 1.3
VPS16-204ENST00000417508 ZIC5Q96T25 663 aa23.16■■□□□ 1.3
VPS16-204ENST00000417508 FAM205AQ6ZU69 1335 aa23.15■■□□□ 1.3
VPS16-204ENST00000417508 PAPPA2Q9BXP8 1791 aa23.15■■□□□ 1.3
VPS16-204ENST00000417508 HIBADHP31937 336 aaKnown RBP23.15■■□□□ 1.3
VPS16-204ENST00000417508 CERS5Q8N5B7 392 aa23.15■■□□□ 1.3
VPS16-204ENST00000417508 ANKRD44Q8N8A2 993 aa23.15■■□□□ 1.3
VPS16-204ENST00000417508 TDRD7Q8NHU6 1098 aaKnown RBP23.15■■□□□ 1.3
VPS16-204ENST00000417508 PUS3Q9BZE2 481 aaKnown RBP23.15■■□□□ 1.3
VPS16-204ENST00000417508 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
VPS16-204ENST00000417508 SAGE1Q9NXZ1 904 aa23.15■■□□□ 1.3
VPS16-204ENST00000417508 FAM84BQ96KN1 310 aaPredicted RBP23.14■■□□□ 1.29
VPS16-204ENST00000417508 MYO1BO43795 1136 aa23.13■■□□□ 1.29
VPS16-204ENST00000417508 PRAMEF18Q5VWM3 479 aa23.12■■□□□ 1.29
VPS16-204ENST00000417508 TSKSQ9UJT2 592 aa23.12■■□□□ 1.29
VPS16-204ENST00000417508 SCAF8Q9UPN6 1271 aaKnown RBP23.12■■□□□ 1.29
VPS16-204ENST00000417508 HDAC5Q9UQL6 1122 aa23.12■■□□□ 1.29
VPS16-204ENST00000417508 AKAP11Q9UKA4 1901 aa23.12■■□□□ 1.29
VPS16-204ENST00000417508 UBE2Q2LH0YL09 131 aa23.11■■□□□ 1.29
VPS16-204ENST00000417508 TTLL12Q14166 644 aaPredicted RBP23.11■■□□□ 1.29
VPS16-204ENST00000417508 ARMC9Q7Z3E5 817 aa23.11■■□□□ 1.29
VPS16-204ENST00000417508 RASAL3Q86YV0 1011 aa23.11■■□□□ 1.29
VPS16-204ENST00000417508 CSRNP1Q96S65 589 aa23.11■■□□□ 1.29
VPS16-204ENST00000417508 PPP2R3BQ9Y5P8 575 aa23.11■■□□□ 1.29
VPS16-204ENST00000417508 COL1A1P02452 1464 aaPredicted RBP23.11■■□□□ 1.29
VPS16-204ENST00000417508 CASP8AP2Q9UKL3 1982 aa23.1■■□□□ 1.29
VPS16-204ENST00000417508 PDE8BO95263 885 aa23.1■■□□□ 1.29
VPS16-204ENST00000417508 GYG1P46976 350 aa23.1■■□□□ 1.29
VPS16-204ENST00000417508 CFAP100Q494V2 611 aa23.1■■□□□ 1.29
VPS16-204ENST00000417508 CAVIN4Q5BKX8 364 aa23.1■■□□□ 1.29
VPS16-204ENST00000417508 METTL24Q5JXM2 366 aa23.1■■□□□ 1.29
VPS16-204ENST00000417508 FBXO33Q7Z6M2 555 aa23.1■■□□□ 1.29
VPS16-204ENST00000417508 API5Q9BZZ5 524 aaKnown RBP23.1■■□□□ 1.29
VPS16-204ENST00000417508 DEFB129Q9H1M3 183 aa23.1■■□□□ 1.29
VPS16-204ENST00000417508 SPDYE2BA6NHP3 402 aa23.09■■□□□ 1.29
VPS16-204ENST00000417508 F8W031 263 aaPredicted RBP23.09■■□□□ 1.29
VPS16-204ENST00000417508 SPDYE6P0CI01 402 aa23.09■■□□□ 1.29
VPS16-204ENST00000417508 LRRC24Q50LG9 513 aa23.09■■□□□ 1.29
VPS16-204ENST00000417508 MFSD14BQ5SR56 506 aa23.09■■□□□ 1.29
VPS16-204ENST00000417508 VPS37DQ86XT2 251 aa23.09■■□□□ 1.29
VPS16-204ENST00000417508 ABHD8Q96I13 439 aa23.09■■□□□ 1.29
VPS16-204ENST00000417508 MOB2Q70IA6 237 aa23.08■■□□□ 1.29
VPS16-204ENST00000417508 PRMT6Q96LA8 375 aaPredicted RBP23.08■■□□□ 1.29
VPS16-204ENST00000417508 RNF186Q9NXI6 227 aa23.08■■□□□ 1.29
VPS16-204ENST00000417508 NOB1Q9ULX3 412 aaKnown RBP23.08■■□□□ 1.29
VPS16-204ENST00000417508 VGLL2Q8N8G2 317 aa23.07■■□□□ 1.28
VPS16-204ENST00000417508 TBC1D22AQ8WUA7 517 aa23.07■■□□□ 1.28
VPS16-204ENST00000417508 SERPINA10Q9UK55 444 aa23.07■■□□□ 1.28
VPS16-204ENST00000417508 ECM29Q5VYK3 1845 aa23.07■■□□□ 1.28
VPS16-204ENST00000417508 UNCXA6NJT0 531 aa23.06■■□□□ 1.28
VPS16-204ENST00000417508 TRPA1O75762 1119 aa23.06■■□□□ 1.28
VPS16-204ENST00000417508 UBTFL1P0CB47 393 aaPredicted RBP23.06■■□□□ 1.28
VPS16-204ENST00000417508 RBM5P52756 815 aaKnown RBP eCLIP23.06■■□□□ 1.28
VPS16-204ENST00000417508 SUPT20HL1Q3ZLR7 823 aa23.06■■□□□ 1.28
VPS16-204ENST00000417508 ARHGAP45Q92619 1136 aa23.06■■□□□ 1.28
VPS16-204ENST00000417508 FBXO3Q9UK99 471 aa23.06■■□□□ 1.28
VPS16-204ENST00000417508 JAG2Q9Y219 1238 aa23.06■■□□□ 1.28
VPS16-204ENST00000417508 KIF16BQ96L93 1317 aa23.06■■□□□ 1.28
VPS16-204ENST00000417508 EYA2O00167 538 aa23.05■■□□□ 1.28
VPS16-204ENST00000417508 LDLRAD1Q5T700 205 aa23.05■■□□□ 1.28
VPS16-204ENST00000417508 TTF2Q9UNY4 1162 aaKnown RBP23.05■■□□□ 1.28
VPS16-204ENST00000417508 PPP1R12BO60237 982 aaPredicted RBP23.04■■□□□ 1.28
VPS16-204ENST00000417508 FRAT2O75474 233 aaPredicted RBP23.04■■□□□ 1.28
VPS16-204ENST00000417508 IFIT1P09914 478 aaKnown RBP23.04■■□□□ 1.28
VPS16-204ENST00000417508 RFX5P48382 616 aaPredicted RBP23.04■■□□□ 1.28
VPS16-204ENST00000417508 RARSP54136 660 aaKnown RBP23.04■■□□□ 1.28
VPS16-204ENST00000417508 PUM3Q15397 648 aaKnown RBP23.04■■□□□ 1.28
VPS16-204ENST00000417508 MAP3K11Q16584 847 aa23.04■■□□□ 1.28
VPS16-204ENST00000417508 KLHDC4Q8TBB5 520 aa23.04■■□□□ 1.28
VPS16-204ENST00000417508 TM4SF4P48230 202 aa23.03■■□□□ 1.28
VPS16-204ENST00000417508 HDLBPQ00341 1268 aaKnown RBP23.03■■□□□ 1.28
VPS16-204ENST00000417508 PTPN12Q05209 780 aaKnown RBP23.03■■□□□ 1.28
VPS16-204ENST00000417508 TNFAIP1Q13829 316 aa23.03■■□□□ 1.28
VPS16-204ENST00000417508 MRIQ9BWK5 157 aa23.03■■□□□ 1.28
VPS16-204ENST00000417508 ANGEL1Q9UNK9 670 aaKnown RBP23.03■■□□□ 1.28
VPS16-204ENST00000417508 PCDHAC2Q9Y5I4 1007 aa23.03■■□□□ 1.28
VPS16-204ENST00000417508 FGFR2P21802 821 aa23.02■■□□□ 1.28
VPS16-204ENST00000417508 VEZTQ9HBM0 779 aa23.02■■□□□ 1.28
VPS16-204ENST00000417508 CLRN2A0PK11 232 aa23.01■■□□□ 1.27
VPS16-204ENST00000417508 PRKG1Q13976 671 aa23.01■■□□□ 1.27
VPS16-204ENST00000417508 SPDYE2Q495Y8 402 aa23.01■■□□□ 1.27
VPS16-204ENST00000417508 LPIN2Q92539 896 aa23.01■■□□□ 1.27
VPS16-204ENST00000417508 SUGT1Q9Y2Z0 365 aa23.01■■□□□ 1.27
VPS16-204ENST00000417508 IPO8O15397 1037 aaKnown RBP23■■□□□ 1.27
VPS16-204ENST00000417508 CIAO1O76071 339 aa23■■□□□ 1.27
VPS16-204ENST00000417508 SLC5A1P13866 664 aa23■■□□□ 1.27
VPS16-204ENST00000417508 BCAMP50895 628 aa23■■□□□ 1.27
VPS16-204ENST00000417508 SREBF2Q12772 1141 aa23■■□□□ 1.27
VPS16-204ENST00000417508 DZIP1LQ8IYY4 767 aaKnown RBP23■■□□□ 1.27
VPS16-204ENST00000417508 SLC10A4Q96EP9 437 aa23■■□□□ 1.27
VPS16-204ENST00000417508 MCOLN1Q9GZU1 580 aa23■■□□□ 1.27
VPS16-204ENST00000417508 ZNF70Q9UC06 446 aaPredicted RBP23■■□□□ 1.27
VPS16-204ENST00000417508 CRKP46108 304 aa22.99■■□□□ 1.27
VPS16-204ENST00000417508 INHBEP58166 350 aa22.99■■□□□ 1.27
VPS16-204ENST00000417508 DGKZQ13574 1117 aa22.99■■□□□ 1.27
VPS16-204ENST00000417508 RASA3Q14644 834 aa22.99■■□□□ 1.27
VPS16-204ENST00000417508 INTS3Q68E01 1043 aaKnown RBP22.99■■□□□ 1.27
VPS16-204ENST00000417508 IQSEC3Q9UPP2 1182 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms