RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 NOGQ13253 232 aa22.46■■□□□ 1.19
CPNE1-210ENST00000416778 MIER1Q8N108 512 aa22.46■■□□□ 1.19
CPNE1-210ENST00000416778 CCDC102AQ96A19 550 aa22.46■■□□□ 1.19
CPNE1-210ENST00000416778 GYG1P46976 350 aa22.45■■□□□ 1.18
CPNE1-210ENST00000416778 ZNF157P51786 506 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-210ENST00000416778 FBXO33Q7Z6M2 555 aa22.45■■□□□ 1.18
CPNE1-210ENST00000416778 MTMR14Q8NCE2 650 aa22.45■■□□□ 1.18
CPNE1-210ENST00000416778 KLHDC4Q8TBB5 520 aa22.45■■□□□ 1.18
CPNE1-210ENST00000416778 FAM205AQ6ZU69 1335 aa22.45■■□□□ 1.18
CPNE1-210ENST00000416778 RFX5P48382 616 aaPredicted RBP22.44■■□□□ 1.18
CPNE1-210ENST00000416778 FKBP1BP68106 108 aa22.44■■□□□ 1.18
CPNE1-210ENST00000416778 VGLL2Q8N8G2 317 aa22.44■■□□□ 1.18
CPNE1-210ENST00000416778 JAG2Q9Y219 1238 aa22.44■■□□□ 1.18
CPNE1-210ENST00000416778 ZNF646O15015 1829 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-210ENST00000416778 PDE8BO95263 885 aa22.43■■□□□ 1.18
CPNE1-210ENST00000416778 DLGAP5Q15398 846 aa22.43■■□□□ 1.18
CPNE1-210ENST00000416778 API5Q9BZZ5 524 aaKnown RBP22.43■■□□□ 1.18
CPNE1-210ENST00000416778 PCDHAC2Q9Y5I4 1007 aa22.43■■□□□ 1.18
CPNE1-210ENST00000416778 F8W031 263 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-210ENST00000416778 KIF23Q02241 960 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-210ENST00000416778 METTL24Q5JXM2 366 aa22.42■■□□□ 1.18
CPNE1-210ENST00000416778 MOB2Q70IA6 237 aa22.42■■□□□ 1.18
CPNE1-210ENST00000416778 ARHGAP45Q92619 1136 aa22.42■■□□□ 1.18
CPNE1-210ENST00000416778 PRMT6Q96LA8 375 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-210ENST00000416778 CA12O43570 354 aa22.41■■□□□ 1.18
CPNE1-210ENST00000416778 PTPN12Q05209 780 aaKnown RBP22.41■■□□□ 1.18
CPNE1-210ENST00000416778 THSD7BQ9C0I4 1608 aa22.41■■□□□ 1.18
CPNE1-210ENST00000416778 UBE2Q2LH0YL09 131 aa22.4■■□□□ 1.18
CPNE1-210ENST00000416778 CFAP100Q494V2 611 aa22.4■■□□□ 1.18
CPNE1-210ENST00000416778 DIEXFQ68CQ4 756 aaKnown RBP22.4■■□□□ 1.18
CPNE1-210ENST00000416778 TSKSQ9UJT2 592 aa22.4■■□□□ 1.18
CPNE1-210ENST00000416778 EYA2O00167 538 aa22.39■■□□□ 1.17
CPNE1-210ENST00000416778 SLC10A3P09131 477 aa22.39■■□□□ 1.17
CPNE1-210ENST00000416778 FGFR2P21802 821 aa22.39■■□□□ 1.17
CPNE1-210ENST00000416778 APOBEC3FQ8IUX4 373 aaKnown RBP22.39■■□□□ 1.17
CPNE1-210ENST00000416778 SPDYE2BA6NHP3 402 aa22.38■■□□□ 1.17
CPNE1-210ENST00000416778 UBTFL1P0CB47 393 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-210ENST00000416778 SPDYE6P0CI01 402 aa22.38■■□□□ 1.17
CPNE1-210ENST00000416778 MFSD14BQ5SR56 506 aa22.38■■□□□ 1.17
CPNE1-210ENST00000416778 INTS3Q68E01 1043 aaKnown RBP22.38■■□□□ 1.17
CPNE1-210ENST00000416778 ATG9AQ7Z3C6 839 aa22.38■■□□□ 1.17
CPNE1-210ENST00000416778 CSRNP1Q96S65 589 aa22.38■■□□□ 1.17
CPNE1-210ENST00000416778 DEFB129Q9H1M3 183 aa22.38■■□□□ 1.17
CPNE1-210ENST00000416778 CAPN15O75808 1086 aa22.37■■□□□ 1.17
CPNE1-210ENST00000416778 BCAMP50895 628 aa22.37■■□□□ 1.17
CPNE1-210ENST00000416778 CAVIN4Q5BKX8 364 aa22.37■■□□□ 1.17
CPNE1-210ENST00000416778 AOX1Q06278 1338 aa22.36■■□□□ 1.17
CPNE1-210ENST00000416778 A0A1B0GUL6 1792 aa22.36■■□□□ 1.17
CPNE1-210ENST00000416778 VPS37DQ86XT2 251 aa22.36■■□□□ 1.17
CPNE1-210ENST00000416778 RASAL3Q86YV0 1011 aa22.36■■□□□ 1.17
CPNE1-210ENST00000416778 IQSEC3Q9UPP2 1182 aaPredicted RBP22.36■■□□□ 1.17
CPNE1-210ENST00000416778 HDAC5Q9UQL6 1122 aa22.36■■□□□ 1.17
CPNE1-210ENST00000416778 BCAR3O75815 825 aa22.35■■□□□ 1.17
CPNE1-210ENST00000416778 NF2P35240 595 aa22.35■■□□□ 1.17
CPNE1-210ENST00000416778 GRIK5Q16478 980 aa22.35■■□□□ 1.17
CPNE1-210ENST00000416778 TTF2Q9UNY4 1162 aaKnown RBP22.35■■□□□ 1.17
CPNE1-210ENST00000416778 LRRFIP2Q9Y608 721 aaKnown RBP22.35■■□□□ 1.17
CPNE1-210ENST00000416778 MYO1BO43795 1136 aa22.34■■□□□ 1.17
CPNE1-210ENST00000416778 RBM5P52756 815 aaKnown RBP eCLIP22.34■■□□□ 1.173e-6■■■□□ 15.4
CPNE1-210ENST00000416778 TTLL12Q14166 644 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-210ENST00000416778 PUM3Q15397 648 aaKnown RBP22.34■■□□□ 1.17
CPNE1-210ENST00000416778 LDLRAD1Q5T700 205 aa22.34■■□□□ 1.17
CPNE1-210ENST00000416778 MEIS3Q99687 375 aa22.34■■□□□ 1.17
CPNE1-210ENST00000416778 RNF186Q9NXI6 227 aa22.34■■□□□ 1.17
CPNE1-210ENST00000416778 SERPINA10Q9UK55 444 aa22.34■■□□□ 1.17
CPNE1-210ENST00000416778 FBXO3Q9UK99 471 aa22.34■■□□□ 1.17
CPNE1-210ENST00000416778 CLRN2A0PK11 232 aa22.33■■□□□ 1.17
CPNE1-210ENST00000416778 IPO8O15397 1037 aaKnown RBP22.33■■□□□ 1.17
CPNE1-210ENST00000416778 IFIT1P09914 478 aaKnown RBP22.33■■□□□ 1.17
CPNE1-210ENST00000416778 REM2Q8IYK8 340 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-210ENST00000416778 LPIN2Q92539 896 aa22.33■■□□□ 1.17
CPNE1-210ENST00000416778 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
CPNE1-210ENST00000416778 CIAO1O76071 339 aa22.32■■□□□ 1.16
CPNE1-210ENST00000416778 PRKG1Q13976 671 aa22.32■■□□□ 1.16
CPNE1-210ENST00000416778 ARMC9Q7Z3E5 817 aa22.32■■□□□ 1.16
CPNE1-210ENST00000416778 MRIQ9BWK5 157 aa22.32■■□□□ 1.16
CPNE1-210ENST00000416778 PPP2R3BQ9Y5P8 575 aa22.32■■□□□ 1.16
CPNE1-210ENST00000416778 FRAT2O75474 233 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-210ENST00000416778 TRPA1O75762 1119 aa22.31■■□□□ 1.16
CPNE1-210ENST00000416778 CHAF1AQ13111 956 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-210ENST00000416778 DZIP1LQ8IYY4 767 aaKnown RBP22.31■■□□□ 1.16
CPNE1-210ENST00000416778 TBC1D22AQ8WUA7 517 aa22.31■■□□□ 1.16
CPNE1-210ENST00000416778 SIL1Q9H173 461 aa22.31■■□□□ 1.16
CPNE1-210ENST00000416778 COPRSQ9NQ92 184 aa22.31■■□□□ 1.16
CPNE1-210ENST00000416778 SAGE1Q9NXZ1 904 aa22.31■■□□□ 1.16
CPNE1-210ENST00000416778 CEP126Q9P2H0 1117 aa22.31■■□□□ 1.16
CPNE1-210ENST00000416778 ZNF70Q9UC06 446 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-210ENST00000416778 TRIM27P14373 513 aa22.3■■□□□ 1.16
CPNE1-210ENST00000416778 CRKP46108 304 aa22.3■■□□□ 1.16
CPNE1-210ENST00000416778 HDLBPQ00341 1268 aaKnown RBP22.3■■□□□ 1.16
CPNE1-210ENST00000416778 HNRNPUQ00839 825 aaKnown RBP eCLIP22.3■■□□□ 1.16
CPNE1-210ENST00000416778 RASA3Q14644 834 aa22.3■■□□□ 1.16
CPNE1-210ENST00000416778 MAP3K11Q16584 847 aa22.3■■□□□ 1.16
CPNE1-210ENST00000416778 SUPT20HL1Q3ZLR7 823 aa22.3■■□□□ 1.16
CPNE1-210ENST00000416778 TDRD3Q9H7E2 651 aaKnown RBP22.3■■□□□ 1.16
CPNE1-210ENST00000416778 VEZTQ9HBM0 779 aa22.3■■□□□ 1.16
CPNE1-210ENST00000416778 FZD1Q9UP38 647 aa22.3■■□□□ 1.16
CPNE1-210ENST00000416778 PA2G4Q9UQ80 394 aaKnown RBP22.3■■□□□ 1.16
CPNE1-210ENST00000416778 TNNQ9UQP3 1299 aa22.3■■□□□ 1.16
CPNE1-210ENST00000416778 PAPPA2Q9BXP8 1791 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms