RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 RRAGBQ5VZM2 374 aa14.7□□□□□ -0.06
SCN1B-202ENST00000415950 PHKBQ93100 1093 aa14.7□□□□□ -0.06
SCN1B-202ENST00000415950 ERCC3P19447 782 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 ATP2B3Q16720 1220 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 WWC2Q6AWC2 1192 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 CTAGE15A4D2H0 777 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 CTAGE8P0CG41 777 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 CTAGE6Q86UF2 777 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 CTAGE4Q8IX94 777 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 TRIM47Q96LD4 638 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 UHRF1BP1LA0JNW5 1464 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 ALDH1L1O75891 902 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 SMC1AQ14683 1233 aaKnown RBP14.69□□□□□ -0.06
SCN1B-202ENST00000415950 CABLES1Q8TDN4 633 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 DESI2Q9BSY9 194 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 GOLGA6L9A6NEM1 432 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 ZNF444Q8N0Y2 327 aaPredicted RBP14.69□□□□□ -0.06
SCN1B-202ENST00000415950 IL17REQ8NFR9 667 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 BAG1Q99933 345 aaPredicted RBP14.69□□□□□ -0.06
SCN1B-202ENST00000415950 CWC25Q9NXE8 425 aaPredicted RBP14.69□□□□□ -0.06
SCN1B-202ENST00000415950 SERPINA10Q9UK55 444 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 MRVI1Q9Y6F6 885 aa14.69□□□□□ -0.06
SCN1B-202ENST00000415950 ZNF202O95125 648 aa14.68□□□□□ -0.06
SCN1B-202ENST00000415950 CETN2P41208 172 aa14.68□□□□□ -0.06
SCN1B-202ENST00000415950 ADKP55263 362 aaKnown RBP14.68□□□□□ -0.06
SCN1B-202ENST00000415950 CATIPQ7Z7H3 387 aa14.68□□□□□ -0.06
SCN1B-202ENST00000415950 hCG_1642624A0A1W2PR95 340 aa14.68□□□□□ -0.06
SCN1B-202ENST00000415950 MICALCLQ6ZW33 695 aa14.68□□□□□ -0.06
SCN1B-202ENST00000415950 ALS2CR12Q96Q35 445 aa14.68□□□□□ -0.06
SCN1B-202ENST00000415950 PLA2R1Q13018 1463 aa14.68□□□□□ -0.06
SCN1B-202ENST00000415950 MYL5Q02045 173 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 CAVIN4Q5BKX8 364 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 DZIP1Q86YF9 867 aaKnown RBP14.67□□□□□ -0.06
SCN1B-202ENST00000415950 NAA15Q9BXJ9 866 aaKnown RBP14.67□□□□□ -0.06
SCN1B-202ENST00000415950 TCP11L1Q9NUJ3 509 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 MTX1Q13505 466 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 ZNF827Q17R98 1081 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 MFSD6Q6ZSS7 791 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 ERVK-7P63135 1459 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 MICALL1Q8N3F8 863 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 GOLGA1Q92805 767 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 PUS7Q96PZ0 661 aaKnown RBP14.67□□□□□ -0.06
SCN1B-202ENST00000415950 POTEB2H3BUK9 544 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 CHMP4BP1P59074 171 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 CUL4AQ13619 759 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 MMRN2Q9H8L6 949 aa14.67□□□□□ -0.06
SCN1B-202ENST00000415950 SNRPA1P09661 255 aaKnown RBP14.66□□□□□ -0.06
SCN1B-202ENST00000415950 LRRC8AQ8IWT6 810 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 MIGA1Q8NAN2 632 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 VPS16Q9H269 839 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 TLR7Q9NYK1 1049 aaKnown RBP14.66□□□□□ -0.06
SCN1B-202ENST00000415950 ZEB2O60315 1214 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 SSH3Q8TE77 659 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 EEF2KMTQ96G04 330 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 ITSN2Q9NZM3 1697 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 B4E1Z4 1266 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 SF3A3Q12874 501 aaKnown RBP eCLIP14.66□□□□□ -0.06
SCN1B-202ENST00000415950 PLEKHA4Q9H4M7 779 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 EIF2AK4Q9P2K8 1649 aaKnown RBP14.66□□□□□ -0.06
SCN1B-202ENST00000415950 SAMD9Q5K651 1589 aa14.66□□□□□ -0.06
SCN1B-202ENST00000415950 WDHD1O75717 1129 aaPredicted RBP14.65□□□□□ -0.06
SCN1B-202ENST00000415950 CRACR2BQ8N4Y2 399 aaPredicted RBP14.65□□□□□ -0.06
SCN1B-202ENST00000415950 PSMB7Q99436 277 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 FAM170AA1A519 330 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 ARID5AQ03989 594 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 C11orf57Q6ZUT1 292 aaPredicted RBP14.65□□□□□ -0.06
SCN1B-202ENST00000415950 RAB34Q9BZG1 259 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 LSG1Q9H089 658 aaKnown RBP14.65□□□□□ -0.06
SCN1B-202ENST00000415950 RNF41Q9H4P4 317 aaPredicted RBP14.65□□□□□ -0.06
SCN1B-202ENST00000415950 TMEM266Q2M3C6 531 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 NFE2L3Q9Y4A8 694 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 GCC2Q8IWJ2 1684 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 YTHDC2Q9H6S0 1430 aaKnown RBP14.65□□□□□ -0.06
SCN1B-202ENST00000415950 TSPY2A6NKD2 308 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 POLR2DO15514 142 aaKnown RBP14.65□□□□□ -0.06
SCN1B-202ENST00000415950 HOXC9P31274 260 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 GTF2A1P52655 376 aaPredicted RBP14.65□□□□□ -0.06
SCN1B-202ENST00000415950 DMTNQ08495 405 aa14.65□□□□□ -0.06
SCN1B-202ENST00000415950 CTAGE9A4FU28 777 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 SEC31AO94979 1220 aaKnown RBP14.64□□□□□ -0.07
SCN1B-202ENST00000415950 WTAPQ15007 396 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 HOOK3Q86VS8 718 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 FGFR1OPO95684 399 aaKnown RBP14.64□□□□□ -0.07
SCN1B-202ENST00000415950 ANO1Q5XXA6 986 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 CCDC91Q7Z6B0 441 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 SHANK2Q9UPX8 1470 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 ANKRD18BA2A2Z9 1011 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 OAS2P29728 719 aaKnown RBP14.64□□□□□ -0.07
SCN1B-202ENST00000415950 CMTR1Q8N1G2 835 aaKnown RBP14.64□□□□□ -0.07
SCN1B-202ENST00000415950 CABP5Q9NP86 173 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 TMOD3Q9NYL9 352 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 ANKIB1Q9P2G1 1089 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 ABCC1P33527 1531 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 TNNI3KQ59H18 835 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.64□□□□□ -0.07
SCN1B-202ENST00000415950 PDLIM2Q96JY6 352 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 SPAG5Q96R06 1193 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 ZSWIM6Q9HCJ5 1215 aa14.64□□□□□ -0.07
SCN1B-202ENST00000415950 FPGT-TNNI3KV9GXZ4 949 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms