RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 CLASRPQ8N2M8 674 aaKnown RBP20.27■□□□□ 0.84
LINC00398-201ENST00000414407 FBXW7Q969H0 707 aa20.27■□□□□ 0.84
LINC00398-201ENST00000414407 CNOT7Q9UIV1 285 aaKnown RBP20.27■□□□□ 0.84
LINC00398-201ENST00000414407 H7C1D1 291 aa20.26■□□□□ 0.83
LINC00398-201ENST00000414407 EPS15P42566 896 aa20.26■□□□□ 0.83
LINC00398-201ENST00000414407 PHKA1P46020 1223 aa20.26■□□□□ 0.83
LINC00398-201ENST00000414407 GORABQ5T7V8 394 aa20.26■□□□□ 0.83
LINC00398-201ENST00000414407 TBC1D22AQ8WUA7 517 aa20.26■□□□□ 0.83
LINC00398-201ENST00000414407 EAF2Q96CJ1 260 aaPredicted RBP20.26■□□□□ 0.83
LINC00398-201ENST00000414407 PDS5AQ29RF7 1337 aaKnown RBP20.26■□□□□ 0.83
LINC00398-201ENST00000414407 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
LINC00398-201ENST00000414407 USP50Q70EL3 339 aaPredicted RBP20.25■□□□□ 0.83
LINC00398-201ENST00000414407 MICALL2Q8IY33 904 aa20.25■□□□□ 0.83
LINC00398-201ENST00000414407 LRRCC1Q9C099 1032 aa20.25■□□□□ 0.83
LINC00398-201ENST00000414407 ADARB2Q9NS39 739 aaKnown RBP20.25■□□□□ 0.83
LINC00398-201ENST00000414407 DENND2AQ9ULE3 1009 aa20.25■□□□□ 0.83
LINC00398-201ENST00000414407 ZNF646O15015 1829 aaPredicted RBP20.25■□□□□ 0.83
LINC00398-201ENST00000414407 USP17L8P0C7I0 530 aa20.24■□□□□ 0.83
LINC00398-201ENST00000414407 UQCRFS1P1P0C7P4 283 aa20.24■□□□□ 0.83
LINC00398-201ENST00000414407 IRX6P78412 446 aaPredicted RBP20.24■□□□□ 0.83
LINC00398-201ENST00000414407 CCDC158Q5M9N0 1113 aa20.24■□□□□ 0.83
LINC00398-201ENST00000414407 C16orf71Q8IYS4 520 aaPredicted RBP20.24■□□□□ 0.83
LINC00398-201ENST00000414407 ZNF512BQ96KM6 892 aaPredicted RBP20.24■□□□□ 0.83
LINC00398-201ENST00000414407 DBNDD2Q9BQY9 259 aa20.24■□□□□ 0.83
LINC00398-201ENST00000414407 RWDD1Q9H446 243 aaPredicted RBP20.24■□□□□ 0.83
LINC00398-201ENST00000414407 IL1RAPL2Q9NP60 686 aa20.24■□□□□ 0.83
LINC00398-201ENST00000414407 IQSEC3Q9UPP2 1182 aaPredicted RBP20.24■□□□□ 0.83
LINC00398-201ENST00000414407 APBB1O00213 710 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 TOMM70O94826 608 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 ARID4AP29374 1257 aaPredicted RBP20.23■□□□□ 0.83
LINC00398-201ENST00000414407 MFSD14BQ5SR56 506 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 AACSQ86V21 672 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 OGFOD1Q8N543 542 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 CERS5Q8N5B7 392 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 WDR66Q8TBY9 1149 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 GCC1Q96CN9 775 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 MXD3Q9BW11 206 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 DBNLQ9UJU6 430 aaKnown RBP20.23■□□□□ 0.83
LINC00398-201ENST00000414407 SUGT1Q9Y2Z0 365 aa20.23■□□□□ 0.83
LINC00398-201ENST00000414407 CHAF1AQ13111 956 aaPredicted RBP20.22■□□□□ 0.83
LINC00398-201ENST00000414407 CCDC8Q9H0W5 538 aaPredicted RBP20.22■□□□□ 0.83
LINC00398-201ENST00000414407 HDAC9Q9UKV0 1011 aa20.22■□□□□ 0.83
LINC00398-201ENST00000414407 SALL1Q9NSC2 1324 aa20.22■□□□□ 0.83
LINC00398-201ENST00000414407 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
LINC00398-201ENST00000414407 RASGRF1Q13972 1273 aa20.21■□□□□ 0.83
LINC00398-201ENST00000414407 RBM46Q8TBY0 533 aaKnown RBP20.21■□□□□ 0.83
LINC00398-201ENST00000414407 COL1A1P02452 1464 aaPredicted RBP20.2■□□□□ 0.82
LINC00398-201ENST00000414407 TTC39AQ5SRH9 613 aa20.2■□□□□ 0.82
LINC00398-201ENST00000414407 LDHDQ86WU2 507 aa20.2■□□□□ 0.82
LINC00398-201ENST00000414407 KIAA0825Q8IV33 1275 aa20.2■□□□□ 0.82
LINC00398-201ENST00000414407 TLR7Q9NYK1 1049 aaKnown RBP20.2■□□□□ 0.82
LINC00398-201ENST00000414407 JAG2Q9Y219 1238 aa20.2■□□□□ 0.82
LINC00398-201ENST00000414407 SHTN1A0MZ66 631 aa20.19■□□□□ 0.82
LINC00398-201ENST00000414407 ZGPATQ8N5A5 531 aaKnown RBP20.19■□□□□ 0.82
LINC00398-201ENST00000414407 ZC3H15Q8WU90 426 aaKnown RBP20.19■□□□□ 0.82
LINC00398-201ENST00000414407 MYOZ2Q9NPC6 264 aa20.19■□□□□ 0.82
LINC00398-201ENST00000414407 EAPPQ56P03 285 aaPredicted RBP20.18■□□□□ 0.82
LINC00398-201ENST00000414407 SAMD7Q7Z3H4 446 aa20.18■□□□□ 0.82
LINC00398-201ENST00000414407 SPATA5Q8NB90 893 aa20.18■□□□□ 0.82
LINC00398-201ENST00000414407 MRIQ9BWK5 157 aa20.18■□□□□ 0.82
LINC00398-201ENST00000414407 HMG20BQ9P0W2 317 aa20.18■□□□□ 0.82
LINC00398-201ENST00000414407 PGAP2Q9UHJ9 254 aa20.18■□□□□ 0.82
LINC00398-201ENST00000414407 MCAMP43121 646 aa20.17■□□□□ 0.82
LINC00398-201ENST00000414407 HIRAP54198 1017 aaPredicted RBP20.17■□□□□ 0.82
LINC00398-201ENST00000414407 HDLBPQ00341 1268 aaKnown RBP20.17■□□□□ 0.82
LINC00398-201ENST00000414407 KIF4BQ2VIQ3 1234 aa20.17■□□□□ 0.82
LINC00398-201ENST00000414407 SMC5Q8IY18 1101 aa20.17■□□□□ 0.82
LINC00398-201ENST00000414407 MTMR14Q8NCE2 650 aa20.17■□□□□ 0.82
LINC00398-201ENST00000414407 SMC1BQ8NDV3 1235 aa20.17■□□□□ 0.82
LINC00398-201ENST00000414407 TRPM4Q8TD43 1214 aa20.17■□□□□ 0.82
LINC00398-201ENST00000414407 MAST3O60307 1309 aa20.17■□□□□ 0.82
LINC00398-201ENST00000414407 ADAMTSL1Q8N6G6 1762 aa20.16■□□□□ 0.82
LINC00398-201ENST00000414407 MYH13Q9UKX3 1938 aa20.16■□□□□ 0.82
LINC00398-201ENST00000414407 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
LINC00398-201ENST00000414407 IGSF3O75054 1194 aa20.16■□□□□ 0.82
LINC00398-201ENST00000414407 IGHDP01880 384 aa20.16■□□□□ 0.82
LINC00398-201ENST00000414407 FSTL1Q12841 308 aa20.16■□□□□ 0.82
LINC00398-201ENST00000414407 TBC1D10BQ4KMP7 808 aaPredicted RBP20.16■□□□□ 0.82
LINC00398-201ENST00000414407 CHADLQ6NUI6 762 aa20.16■□□□□ 0.82
LINC00398-201ENST00000414407 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.16■□□□□ 0.82
LINC00398-201ENST00000414407 SERPINA10Q9UK55 444 aa20.16■□□□□ 0.82
LINC00398-201ENST00000414407 TTF2Q9UNY4 1162 aaKnown RBP20.16■□□□□ 0.82
LINC00398-201ENST00000414407 EGFRP00533 1210 aa20.15■□□□□ 0.82
LINC00398-201ENST00000414407 POTEIP0CG38 1075 aa20.15■□□□□ 0.82
LINC00398-201ENST00000414407 POTEJP0CG39 1038 aa20.15■□□□□ 0.82
LINC00398-201ENST00000414407 SCARF1Q14162 830 aa20.15■□□□□ 0.82
LINC00398-201ENST00000414407 SPTY2D1Q68D10 685 aaPredicted RBP20.15■□□□□ 0.82
LINC00398-201ENST00000414407 ZBTB47Q9UFB7 747 aaPredicted RBP20.15■□□□□ 0.82
LINC00398-201ENST00000414407 F8W031 263 aaPredicted RBP20.14■□□□□ 0.81
LINC00398-201ENST00000414407 LDHBP07195 334 aaKnown RBP20.14■□□□□ 0.81
LINC00398-201ENST00000414407 GRIK5Q16478 980 aa20.14■□□□□ 0.81
LINC00398-201ENST00000414407 RBM26Q5T8P6 1007 aaKnown RBP20.14■□□□□ 0.81
LINC00398-201ENST00000414407 ZBED3Q96IU2 234 aaPredicted RBP20.14■□□□□ 0.81
LINC00398-201ENST00000414407 CLEC11AQ9Y240 323 aa20.14■□□□□ 0.81
LINC00398-201ENST00000414407 NEFLP07196 543 aa20.13■□□□□ 0.81
LINC00398-201ENST00000414407 ATP5JP18859 108 aa20.13■□□□□ 0.81
LINC00398-201ENST00000414407 DLGAP5Q15398 846 aa20.13■□□□□ 0.81
LINC00398-201ENST00000414407 ANKRD45Q5TZF3 282 aa20.13■□□□□ 0.81
LINC00398-201ENST00000414407 PI16Q6UXB8 463 aa20.13■□□□□ 0.81
LINC00398-201ENST00000414407 WNT10BO00744 389 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms