RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 RGPD3A6NKT7 1758 aaPredicted RBP8.93□□□□□ -0.98
LINC00343-201ENST00000414368 RGPD4Q7Z3J3 1758 aa8.93□□□□□ -0.98
LINC00343-201ENST00000414368 TAF1LQ8IZX4 1826 aa8.92□□□□□ -0.98
LINC00343-201ENST00000414368 PAPPAQ13219 1627 aa8.92□□□□□ -0.98
LINC00343-201ENST00000414368 SOBPA7XYQ1 873 aa8.92□□□□□ -0.98
LINC00343-201ENST00000414368 LMOD3Q0VAK6 560 aa8.92□□□□□ -0.98
LINC00343-201ENST00000414368 ITPK1Q13572 414 aa8.92□□□□□ -0.98
LINC00343-201ENST00000414368 ZNF790Q6PG37 636 aa8.92□□□□□ -0.98
LINC00343-201ENST00000414368 DZIP3Q86Y13 1208 aaKnown RBP8.92□□□□□ -0.98
LINC00343-201ENST00000414368 FOXJ1Q92949 421 aa8.92□□□□□ -0.98
LINC00343-201ENST00000414368 ZNF496Q96IT1 587 aaPredicted RBP8.92□□□□□ -0.98
LINC00343-201ENST00000414368 UBR2Q8IWV8 1755 aa8.91□□□□□ -0.98
LINC00343-201ENST00000414368 KCPQ6ZWJ8 1503 aa8.91□□□□□ -0.98
LINC00343-201ENST00000414368 SCARF1Q14162 830 aa8.91□□□□□ -0.98
LINC00343-201ENST00000414368 SLC27A3Q5K4L6 730 aa8.91□□□□□ -0.98
LINC00343-201ENST00000414368 TTC5Q8N0Z6 440 aa8.91□□□□□ -0.98
LINC00343-201ENST00000414368 KDM3BQ7LBC6 1761 aa8.91□□□□□ -0.98
LINC00343-201ENST00000414368 MYH14Q7Z406 1995 aaKnown RBP8.9□□□□□ -0.98
LINC00343-201ENST00000414368 PRAMEF22A3QJZ6 481 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 SH3BP2P78314 561 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 CCDC27Q2M243 656 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 SMIM5Q71RC9 77 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 DNAJC10Q8IXB1 793 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 LINC00116Q8NCU8 138 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 SLC10A4Q96EP9 437 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 OCSTAMPQ9BR26 566 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 TSPYL4Q9UJ04 414 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 C5P01031 1676 aa8.9□□□□□ -0.98
LINC00343-201ENST00000414368 TJP1Q07157 1748 aa8.89□□□□□ -0.99
LINC00343-201ENST00000414368 CHL1O00533 1208 aa8.89□□□□□ -0.99
LINC00343-201ENST00000414368 ZNF853P0CG23 659 aa8.89□□□□□ -0.99
LINC00343-201ENST00000414368 ZNF827Q17R98 1081 aa8.89□□□□□ -0.99
LINC00343-201ENST00000414368 KRT24Q2M2I5 525 aa8.89□□□□□ -0.99
LINC00343-201ENST00000414368 SLFNL1Q499Z3 407 aa8.89□□□□□ -0.99
LINC00343-201ENST00000414368 SH3RF1Q7Z6J0 888 aa8.89□□□□□ -0.99
LINC00343-201ENST00000414368 FMNL2Q96PY5 1086 aa8.89□□□□□ -0.99
LINC00343-201ENST00000414368 COL5A3P25940 1745 aaPredicted RBP8.88□□□□□ -0.99
LINC00343-201ENST00000414368 MSTNO14793 375 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 PPFIA3O75145 1194 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 EIF4A1P60842 406 aaKnown RBP8.88□□□□□ -0.99
LINC00343-201ENST00000414368 R3HDM1Q15032 1099 aaKnown RBP8.88□□□□□ -0.99
LINC00343-201ENST00000414368 ERFEQ4G0M1 354 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 AMIGO3Q86WK7 504 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 TSR2Q969E8 191 aaKnown RBP8.88□□□□□ -0.99
LINC00343-201ENST00000414368 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 CNTNAP3Q9BZ76 1288 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 PPP1R12CQ9BZL4 782 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 MBIPQ9NS73 344 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 TUBGCP6Q96RT7 1819 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 SRCAPQ6ZRS2 3230 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 C4BP0C0L5 1744 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 ZNF831Q5JPB2 1677 aa8.88□□□□□ -0.99
LINC00343-201ENST00000414368 HEG1Q9ULI3 1381 aa8.87□□□□□ -0.99
LINC00343-201ENST00000414368 ZNF521Q96K83 1311 aa8.87□□□□□ -0.99
LINC00343-201ENST00000414368 CYP19A1P11511 503 aaPredicted RBP8.87□□□□□ -0.99
LINC00343-201ENST00000414368 GNAI1P63096 354 aa8.87□□□□□ -0.99
LINC00343-201ENST00000414368 HNRNPUQ00839 825 aaKnown RBP eCLIP8.87□□□□□ -0.99
LINC00343-201ENST00000414368 CALD1Q05682 793 aaKnown RBP8.87□□□□□ -0.99
LINC00343-201ENST00000414368 SLC15A2Q16348 729 aa8.87□□□□□ -0.99
LINC00343-201ENST00000414368 MRPL14Q6P1L8 145 aaKnown RBP8.87□□□□□ -0.99
LINC00343-201ENST00000414368 Q8N3U1 123 aa8.87□□□□□ -0.99
LINC00343-201ENST00000414368 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
LINC00343-201ENST00000414368 PURBQ96QR8 312 aaKnown RBP8.87□□□□□ -0.99
LINC00343-201ENST00000414368 PDGFDQ9GZP0 370 aaPredicted RBP8.87□□□□□ -0.99
LINC00343-201ENST00000414368 IFT57Q9NWB7 429 aa8.87□□□□□ -0.99
LINC00343-201ENST00000414368 USP16Q9Y5T5 823 aa8.87□□□□□ -0.99
LINC00343-201ENST00000414368 UBR3Q6ZT12 1888 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 PALM3A6NDB9 673 aaPredicted RBP8.86□□□□□ -0.99
LINC00343-201ENST00000414368 ELL2O00472 640 aaPredicted RBP8.86□□□□□ -0.99
LINC00343-201ENST00000414368 SIAH2O43255 324 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 GIGYF1O75420 1035 aaPredicted RBP8.86□□□□□ -0.99
LINC00343-201ENST00000414368 A1BGP04217 495 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 SNRPA1P09661 255 aaKnown RBP8.86□□□□□ -0.99
LINC00343-201ENST00000414368 RFX1P22670 979 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 CRKLP46109 303 aaKnown RBP8.86□□□□□ -0.99
LINC00343-201ENST00000414368 PIP4K2AP48426 406 aaPredicted RBP8.86□□□□□ -0.99
LINC00343-201ENST00000414368 MARSP56192 900 aaKnown RBP8.86□□□□□ -0.99
LINC00343-201ENST00000414368 KRT76Q01546 638 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 INTS5Q6P9B9 1019 aaKnown RBP8.86□□□□□ -0.99
LINC00343-201ENST00000414368 RNF135Q8IUD6 432 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 WDR63Q8IWG1 891 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 SVOPQ8N4V2 548 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 EHBP1Q8NDI1 1231 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 UCN2Q96RP3 112 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 BABAM1Q9NWV8 329 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 STK32BQ9NY57 414 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 TFCP2L1Q9NZI6 479 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 CEP126Q9P2H0 1117 aa8.86□□□□□ -0.99
LINC00343-201ENST00000414368 TFIP11Q9UBB9 837 aaKnown RBP8.86□□□□□ -0.99
LINC00343-201ENST00000414368 IL16Q14005 1332 aa8.85□□□□□ -0.99
LINC00343-201ENST00000414368 STARD3NLO95772 234 aa8.85□□□□□ -0.99
LINC00343-201ENST00000414368 SKIP12755 728 aa8.85□□□□□ -0.99
LINC00343-201ENST00000414368 EIF2S2P20042 333 aaKnown RBP8.85□□□□□ -0.99
LINC00343-201ENST00000414368 VARSP26640 1264 aaKnown RBP8.85□□□□□ -0.99
LINC00343-201ENST00000414368 LMOD1P29536 600 aaPredicted RBP8.85□□□□□ -0.99
LINC00343-201ENST00000414368 NBPF20Q3BBV1 942 aa8.85□□□□□ -0.99
LINC00343-201ENST00000414368 ZNF385CQ66K41 422 aaPredicted RBP8.85□□□□□ -0.99
LINC00343-201ENST00000414368 NGEFQ8N5V2 710 aa8.85□□□□□ -0.99
LINC00343-201ENST00000414368 C8orf58Q8NAV2 365 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms