RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 KIAA0825Q8IV33 1275 aa18.17■□□□□ 0.5
CHD1-202ENST00000414220 TRPM4Q8TD43 1214 aa18.17■□□□□ 0.5
CHD1-202ENST00000414220 FAM205AQ6ZU69 1335 aa18.17■□□□□ 0.5
CHD1-202ENST00000414220 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
CHD1-202ENST00000414220 ITGBL1O95965 494 aaPredicted RBP18.16■□□□□ 0.5
CHD1-202ENST00000414220 HIRAP54198 1017 aaPredicted RBP18.16■□□□□ 0.5
CHD1-202ENST00000414220 TFCP2Q12800 502 aa18.16■□□□□ 0.5
CHD1-202ENST00000414220 MFSD14BQ5SR56 506 aa18.16■□□□□ 0.5
CHD1-202ENST00000414220 GORABQ5T7V8 394 aa18.16■□□□□ 0.5
CHD1-202ENST00000414220 CEP85Q6P2H3 762 aa18.16■□□□□ 0.5
CHD1-202ENST00000414220 NEUROD6Q96NK8 337 aa18.16■□□□□ 0.5
CHD1-202ENST00000414220 CHAF1AQ13111 956 aaPredicted RBP18.15■□□□□ 0.5
CHD1-202ENST00000414220 SCARF1Q14162 830 aa18.15■□□□□ 0.5
CHD1-202ENST00000414220 SULF1Q8IWU6 871 aa18.15■□□□□ 0.5
CHD1-202ENST00000414220 MXD3Q9BW11 206 aa18.15■□□□□ 0.5
CHD1-202ENST00000414220 ZBTB40Q9NUA8 1239 aa18.15■□□□□ 0.5
CHD1-202ENST00000414220 A0A1B0GUL7 405 aa18.14■□□□□ 0.49
CHD1-202ENST00000414220 TMEM88BA6NKF7 163 aa18.14■□□□□ 0.49
CHD1-202ENST00000414220 SEMA3EO15041 775 aa18.14■□□□□ 0.49
CHD1-202ENST00000414220 MYO1BO43795 1136 aa18.14■□□□□ 0.49
CHD1-202ENST00000414220 DLGAP5Q15398 846 aa18.14■□□□□ 0.49
CHD1-202ENST00000414220 ERC1Q8IUD2 1116 aa18.14■□□□□ 0.49
CHD1-202ENST00000414220 WDR66Q8TBY9 1149 aa18.14■□□□□ 0.49
CHD1-202ENST00000414220 IQSEC3Q9UPP2 1182 aaPredicted RBP18.14■□□□□ 0.49
CHD1-202ENST00000414220 JAG2Q9Y219 1238 aa18.14■□□□□ 0.49
CHD1-202ENST00000414220 PASKQ96RG2 1323 aa18.14■□□□□ 0.49
CHD1-202ENST00000414220 SCN9AQ15858 1988 aa18.13■□□□□ 0.49
CHD1-202ENST00000414220 F8W031 263 aaPredicted RBP18.13■□□□□ 0.49
CHD1-202ENST00000414220 RBM5P52756 815 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHD1-202ENST00000414220 RRP1P56182 461 aaKnown RBP18.13■□□□□ 0.49
CHD1-202ENST00000414220 TIMM10P62072 90 aa18.13■□□□□ 0.49
CHD1-202ENST00000414220 KRT26Q7Z3Y9 468 aa18.13■□□□□ 0.49
CHD1-202ENST00000414220 GPR108Q9NPR9 543 aa18.13■□□□□ 0.49
CHD1-202ENST00000414220 CREBZFQ9NS37 354 aa18.13■□□□□ 0.49
CHD1-202ENST00000414220 DENND2AQ9ULE3 1009 aa18.13■□□□□ 0.49
CHD1-202ENST00000414220 NOP58Q9Y2X3 529 aaKnown RBP18.13■□□□□ 0.49
CHD1-202ENST00000414220 SUGT1Q9Y2Z0 365 aa18.13■□□□□ 0.49
CHD1-202ENST00000414220 A0A1B0GUL6 1792 aa18.12■□□□□ 0.49
CHD1-202ENST00000414220 TTF2Q9UNY4 1162 aaKnown RBP18.12■□□□□ 0.49
CHD1-202ENST00000414220 MAST3O60307 1309 aa18.12■□□□□ 0.49
CHD1-202ENST00000414220 EGFRP00533 1210 aa18.11■□□□□ 0.49
CHD1-202ENST00000414220 CCDC158Q5M9N0 1113 aa18.11■□□□□ 0.49
CHD1-202ENST00000414220 C20orf194Q5TEA3 1177 aa18.11■□□□□ 0.49
CHD1-202ENST00000414220 USP48Q86UV5 1035 aa18.11■□□□□ 0.49
CHD1-202ENST00000414220 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
CHD1-202ENST00000414220 CERS5Q8N5B7 392 aa18.11■□□□□ 0.49
CHD1-202ENST00000414220 XAGE2Q96GT9 111 aa18.11■□□□□ 0.49
CHD1-202ENST00000414220 GLIS2Q9BZE0 524 aaPredicted RBP18.11■□□□□ 0.49
CHD1-202ENST00000414220 GGA3Q9NZ52 723 aa18.11■□□□□ 0.49
CHD1-202ENST00000414220 PITPNM2Q9BZ72 1349 aa18.11■□□□□ 0.49
CHD1-202ENST00000414220 PSME4Q14997 1843 aa18.1■□□□□ 0.49
CHD1-202ENST00000414220 ADAMTSL1Q8N6G6 1762 aa18.1■□□□□ 0.49
CHD1-202ENST00000414220 WNT10BO00744 389 aa18.1■□□□□ 0.49
CHD1-202ENST00000414220 ANGEL2Q5VTE6 544 aaKnown RBP18.1■□□□□ 0.49
CHD1-202ENST00000414220 CCDC102BQ68D86 513 aa18.1■□□□□ 0.49
CHD1-202ENST00000414220 MTMR14Q8NCE2 650 aa18.1■□□□□ 0.49
CHD1-202ENST00000414220 SERPINA10Q9UK55 444 aa18.1■□□□□ 0.49
CHD1-202ENST00000414220 ZBTB22O15209 634 aa18.09■□□□□ 0.49
CHD1-202ENST00000414220 UQCRFS1P1P0C7P4 283 aa18.09■□□□□ 0.49
CHD1-202ENST00000414220 HDLBPQ00341 1268 aaKnown RBP18.09■□□□□ 0.49
CHD1-202ENST00000414220 CFAP100Q494V2 611 aa18.09■□□□□ 0.49
CHD1-202ENST00000414220 APOBEC3FQ8IUX4 373 aaKnown RBP18.09■□□□□ 0.49
CHD1-202ENST00000414220 CELF2O95319 508 aaKnown RBP18.08■□□□□ 0.48
CHD1-202ENST00000414220 PHKA1P46020 1223 aa18.08■□□□□ 0.48
CHD1-202ENST00000414220 NBPF9Q3BBW0 867 aa18.08■□□□□ 0.48
CHD1-202ENST00000414220 TNNI3KQ59H18 835 aa18.08■□□□□ 0.48
CHD1-202ENST00000414220 SPTY2D1Q68D10 685 aaPredicted RBP18.08■□□□□ 0.48
CHD1-202ENST00000414220 ZNF408Q9H9D4 720 aa18.08■□□□□ 0.48
CHD1-202ENST00000414220 ABT1Q9ULW3 272 aaKnown RBP18.08■□□□□ 0.48
CHD1-202ENST00000414220 FPGT-TNNI3KV9GXZ4 949 aa18.08■□□□□ 0.48
CHD1-202ENST00000414220 TRAF5O00463 557 aa18.07■□□□□ 0.48
CHD1-202ENST00000414220 RAB11FIP3O75154 756 aa18.07■□□□□ 0.48
CHD1-202ENST00000414220 ADORA1P30542 326 aa18.07■□□□□ 0.48
CHD1-202ENST00000414220 TTC39AQ5SRH9 613 aa18.07■□□□□ 0.48
CHD1-202ENST00000414220 TEKT1Q969V4 418 aa18.07■□□□□ 0.48
CHD1-202ENST00000414220 MRIQ9BWK5 157 aa18.07■□□□□ 0.48
CHD1-202ENST00000414220 EXOC6BQ9Y2D4 811 aa18.07■□□□□ 0.48
CHD1-202ENST00000414220 LDHBP07195 334 aaKnown RBP18.06■□□□□ 0.48
CHD1-202ENST00000414220 NF2P35240 595 aa18.06■□□□□ 0.48
CHD1-202ENST00000414220 CRKP46108 304 aa18.06■□□□□ 0.48
CHD1-202ENST00000414220 SLF2Q8IX21 1173 aa18.06■□□□□ 0.48
CHD1-202ENST00000414220 C2orf69Q8N8R5 385 aa18.06■□□□□ 0.48
CHD1-202ENST00000414220 KIF1BPQ96EK5 621 aa18.06■□□□□ 0.48
CHD1-202ENST00000414220 PDS5AQ29RF7 1337 aaKnown RBP18.05■□□□□ 0.48
CHD1-202ENST00000414220 SALL1Q9NSC2 1324 aa18.05■□□□□ 0.48
CHD1-202ENST00000414220 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
CHD1-202ENST00000414220 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
CHD1-202ENST00000414220 HTRA3P83110 453 aa18.05■□□□□ 0.48
CHD1-202ENST00000414220 TNFAIP1Q13829 316 aa18.05■□□□□ 0.48
CHD1-202ENST00000414220 CLASRPQ8N2M8 674 aaKnown RBP18.05■□□□□ 0.48
CHD1-202ENST00000414220 KLRG1Q96E93 195 aa18.05■□□□□ 0.48
CHD1-202ENST00000414220 TMOD2Q9NZR1 351 aa18.05■□□□□ 0.48
CHD1-202ENST00000414220 ADM5C9JUS6 153 aa18.04■□□□□ 0.48
CHD1-202ENST00000414220 AAMPQ13685 434 aa18.04■□□□□ 0.48
CHD1-202ENST00000414220 DEFB115Q30KQ5 88 aa18.04■□□□□ 0.48
CHD1-202ENST00000414220 ZBED3Q96IU2 234 aaPredicted RBP18.04■□□□□ 0.48
CHD1-202ENST00000414220 ASTN2O75129 1339 aaPredicted RBP18.03■□□□□ 0.48
CHD1-202ENST00000414220 TNNI2P48788 182 aa18.03■□□□□ 0.48
CHD1-202ENST00000414220 RASGRF1Q13972 1273 aa18.03■□□□□ 0.48
CHD1-202ENST00000414220 HHIPL2Q6UWX4 724 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms