RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 USP44Q9H0E7 712 aa21.1■□□□□ 0.97
COL6A2-205ENST00000413758 CA12O43570 354 aa21.09■□□□□ 0.97
COL6A2-205ENST00000413758 HIBADHP31937 336 aaKnown RBP21.09■□□□□ 0.97
COL6A2-205ENST00000413758 GYG1P46976 350 aa21.09■□□□□ 0.97
COL6A2-205ENST00000413758 RABL6Q3YEC7 729 aaPredicted RBP21.09■□□□□ 0.97
COL6A2-205ENST00000413758 VPS37DQ86XT2 251 aa21.09■□□□□ 0.97
COL6A2-205ENST00000413758 CERS5Q8N5B7 392 aa21.09■□□□□ 0.97
COL6A2-205ENST00000413758 ZIC5Q96T25 663 aa21.09■□□□□ 0.97
COL6A2-205ENST00000413758 NOB1Q9ULX3 412 aaKnown RBP21.09■□□□□ 0.97
COL6A2-205ENST00000413758 RBM5P52756 815 aaKnown RBP eCLIP21.08■□□□□ 0.97
COL6A2-205ENST00000413758 LRRC24Q50LG9 513 aa21.08■□□□□ 0.97
COL6A2-205ENST00000413758 APOBEC3FQ8IUX4 373 aaKnown RBP21.08■□□□□ 0.97
COL6A2-205ENST00000413758 RIPOR2Q9Y4F9 1068 aa21.08■□□□□ 0.97
COL6A2-205ENST00000413758 FAM155AB1AL88 458 aaPredicted RBP21.07■□□□□ 0.96
COL6A2-205ENST00000413758 FKBP1BP68106 108 aa21.07■□□□□ 0.96
COL6A2-205ENST00000413758 KIF23Q02241 960 aaPredicted RBP21.07■□□□□ 0.96
COL6A2-205ENST00000413758 KLHDC4Q8TBB5 520 aa21.07■□□□□ 0.96
COL6A2-205ENST00000413758 API5Q9BZZ5 524 aaKnown RBP21.07■□□□□ 0.96
COL6A2-205ENST00000413758 UBE2Q2LH0YL09 131 aa21.06■□□□□ 0.96
COL6A2-205ENST00000413758 FRAT2O75474 233 aaPredicted RBP21.06■□□□□ 0.96
COL6A2-205ENST00000413758 UBTFL1P0CB47 393 aaPredicted RBP21.06■□□□□ 0.96
COL6A2-205ENST00000413758 MOB2Q70IA6 237 aa21.06■□□□□ 0.96
COL6A2-205ENST00000413758 MYO1BO43795 1136 aa21.05■□□□□ 0.96
COL6A2-205ENST00000413758 SLC10A3P09131 477 aa21.05■□□□□ 0.96
COL6A2-205ENST00000413758 FKBP1AP62942 108 aaKnown RBP21.05■□□□□ 0.96
COL6A2-205ENST00000413758 PRKG1Q13976 671 aa21.05■□□□□ 0.96
COL6A2-205ENST00000413758 CFAP100Q494V2 611 aa21.05■□□□□ 0.96
COL6A2-205ENST00000413758 FAM84BQ96KN1 310 aaPredicted RBP21.05■□□□□ 0.96
COL6A2-205ENST00000413758 PAPPA2Q9BXP8 1791 aa21.05■□□□□ 0.96
COL6A2-205ENST00000413758 CAVIN4Q5BKX8 364 aa21.04■□□□□ 0.96
COL6A2-205ENST00000413758 MFSD14BQ5SR56 506 aa21.04■□□□□ 0.96
COL6A2-205ENST00000413758 TDRD7Q8NHU6 1098 aaKnown RBP21.04■□□□□ 0.96
COL6A2-205ENST00000413758 ZBED3Q96IU2 234 aaPredicted RBP21.04■□□□□ 0.96
COL6A2-205ENST00000413758 IQSEC3Q9UPP2 1182 aaPredicted RBP21.04■□□□□ 0.96
COL6A2-205ENST00000413758 CLRN2A0PK11 232 aa21.03■□□□□ 0.96
COL6A2-205ENST00000413758 CHAF1AQ13111 956 aaPredicted RBP21.03■□□□□ 0.96
COL6A2-205ENST00000413758 RASAL3Q86YV0 1011 aa21.03■□□□□ 0.96
COL6A2-205ENST00000413758 VEZTQ9HBM0 779 aa21.03■□□□□ 0.96
COL6A2-205ENST00000413758 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.03■□□□□ 0.96
COL6A2-205ENST00000413758 PCDHAC2Q9Y5I4 1007 aa21.03■□□□□ 0.96
COL6A2-205ENST00000413758 FAM205AQ6ZU69 1335 aa21.03■□□□□ 0.96
COL6A2-205ENST00000413758 PDE8BO95263 885 aa21.02■□□□□ 0.96
COL6A2-205ENST00000413758 RARSP54136 660 aaKnown RBP21.02■□□□□ 0.96
COL6A2-205ENST00000413758 ARMC9Q7Z3E5 817 aa21.02■□□□□ 0.96
COL6A2-205ENST00000413758 MTMR14Q8NCE2 650 aa21.02■□□□□ 0.96
COL6A2-205ENST00000413758 TTF2Q9UNY4 1162 aaKnown RBP21.02■□□□□ 0.96
COL6A2-205ENST00000413758 SPDYE2BA6NHP3 402 aa21.01■□□□□ 0.95
COL6A2-205ENST00000413758 IFIT1P09914 478 aaKnown RBP21.01■□□□□ 0.95
COL6A2-205ENST00000413758 SPDYE6P0CI01 402 aa21.01■□□□□ 0.95
COL6A2-205ENST00000413758 DEFB129Q9H1M3 183 aa21.01■□□□□ 0.95
COL6A2-205ENST00000413758 HDAC5Q9UQL6 1122 aa21.01■□□□□ 0.95
COL6A2-205ENST00000413758 KIF16BQ96L93 1317 aa21.01■□□□□ 0.95
COL6A2-205ENST00000413758 EYA2O00167 538 aa21■□□□□ 0.95
COL6A2-205ENST00000413758 PUM3Q15397 648 aaKnown RBP21■□□□□ 0.95
COL6A2-205ENST00000413758 DIEXFQ68CQ4 756 aaKnown RBP21■□□□□ 0.95
COL6A2-205ENST00000413758 FBXO33Q7Z6M2 555 aa21■□□□□ 0.95
COL6A2-205ENST00000413758 PRMT6Q96LA8 375 aaPredicted RBP21■□□□□ 0.95
COL6A2-205ENST00000413758 TRPA1O75762 1119 aa20.99■□□□□ 0.95
COL6A2-205ENST00000413758 MIER1Q8N108 512 aa20.99■□□□□ 0.95
COL6A2-205ENST00000413758 CSRNP1Q96S65 589 aa20.99■□□□□ 0.95
COL6A2-205ENST00000413758 SIL1Q9H173 461 aa20.99■□□□□ 0.95
COL6A2-205ENST00000413758 ANGEL1Q9UNK9 670 aaKnown RBP20.99■□□□□ 0.95
COL6A2-205ENST00000413758 LRRFIP2Q9Y608 721 aaKnown RBP20.99■□□□□ 0.95
COL6A2-205ENST00000413758 SLC5A1P13866 664 aa20.98■□□□□ 0.95
COL6A2-205ENST00000413758 BCAMP50895 628 aa20.98■□□□□ 0.95
COL6A2-205ENST00000413758 MKRN3Q13064 507 aaKnown RBP20.98■□□□□ 0.95
COL6A2-205ENST00000413758 REM2Q8IYK8 340 aaPredicted RBP20.98■□□□□ 0.95
COL6A2-205ENST00000413758 VGLL2Q8N8G2 317 aa20.98■□□□□ 0.95
COL6A2-205ENST00000413758 RNF186Q9NXI6 227 aa20.98■□□□□ 0.95
COL6A2-205ENST00000413758 COL1A1P02452 1464 aaPredicted RBP20.98■□□□□ 0.95
COL6A2-205ENST00000413758 RFX5P48382 616 aaPredicted RBP20.97■□□□□ 0.95
COL6A2-205ENST00000413758 HNRNPUQ00839 825 aaKnown RBP eCLIP20.97■□□□□ 0.95
COL6A2-205ENST00000413758 PTPN12Q05209 780 aaKnown RBP20.97■□□□□ 0.95
COL6A2-205ENST00000413758 TBC1D22AQ8WUA7 517 aa20.97■□□□□ 0.95
COL6A2-205ENST00000413758 FRAT1Q92837 279 aaPredicted RBP20.97■□□□□ 0.95
COL6A2-205ENST00000413758 SAGE1Q9NXZ1 904 aa20.97■□□□□ 0.95
COL6A2-205ENST00000413758 SERPINA10Q9UK55 444 aa20.97■□□□□ 0.95
COL6A2-205ENST00000413758 PPP2R3BQ9Y5P8 575 aa20.97■□□□□ 0.95
COL6A2-205ENST00000413758 IPO8O15397 1037 aaKnown RBP20.96■□□□□ 0.95
COL6A2-205ENST00000413758 SUPT20HL1Q3ZLR7 823 aa20.96■□□□□ 0.95
COL6A2-205ENST00000413758 ABHD8Q96I13 439 aa20.96■□□□□ 0.95
COL6A2-205ENST00000413758 FZD1Q9UP38 647 aa20.96■□□□□ 0.95
COL6A2-205ENST00000413758 AKAP11Q9UKA4 1901 aa20.96■□□□□ 0.95
COL6A2-205ENST00000413758 CASP8AP2Q9UKL3 1982 aa20.96■□□□□ 0.95
COL6A2-205ENST00000413758 ECM29Q5VYK3 1845 aa20.95■□□□□ 0.94
COL6A2-205ENST00000413758 PPP1R12BO60237 982 aaPredicted RBP20.95■□□□□ 0.94
COL6A2-205ENST00000413758 CRKP46108 304 aa20.95■□□□□ 0.94
COL6A2-205ENST00000413758 ARHGAP45Q92619 1136 aa20.95■□□□□ 0.94
COL6A2-205ENST00000413758 MEIS3Q99687 375 aa20.95■□□□□ 0.94
COL6A2-205ENST00000413758 TDRD3Q9H7E2 651 aaKnown RBP20.95■□□□□ 0.94
COL6A2-205ENST00000413758 CEP126Q9P2H0 1117 aa20.95■□□□□ 0.94
COL6A2-205ENST00000413758 ZNF70Q9UC06 446 aaPredicted RBP20.95■□□□□ 0.94
COL6A2-205ENST00000413758 AOX1Q06278 1338 aa20.95■□□□□ 0.94
COL6A2-205ENST00000413758 FGFR2P21802 821 aa20.94■□□□□ 0.94
COL6A2-205ENST00000413758 TNFAIP1Q13829 316 aa20.94■□□□□ 0.94
COL6A2-205ENST00000413758 RASA3Q14644 834 aa20.94■□□□□ 0.94
COL6A2-205ENST00000413758 DZIP1LQ8IYY4 767 aaKnown RBP20.94■□□□□ 0.94
COL6A2-205ENST00000413758 LPIN2Q92539 896 aa20.94■□□□□ 0.94
COL6A2-205ENST00000413758 GNAI3P08754 354 aa20.93■□□□□ 0.94
COL6A2-205ENST00000413758 DGKZQ13574 1117 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms