RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 SYNE3Q6ZMZ3 975 aa16.15■□□□□ 0.18
NUB1-201ENST00000413040 ZNF274Q96GC6 653 aaPredicted RBP16.15■□□□□ 0.18
NUB1-201ENST00000413040 GREM2Q9H772 168 aa16.15■□□□□ 0.18
NUB1-201ENST00000413040 ZNF142P52746 1687 aaPredicted RBP16.15■□□□□ 0.18
NUB1-201ENST00000413040 MRC1P22897 1456 aa16.14■□□□□ 0.18
NUB1-201ENST00000413040 CIAO1O76071 339 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 FDPSP14324 419 aaKnown RBP16.14■□□□□ 0.17
NUB1-201ENST00000413040 NCOA7Q8NI08 942 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 APPBP2Q92624 585 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 ISCA1Q9BUE6 129 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 TRMT112Q9UI30 125 aaKnown RBP16.14■□□□□ 0.17
NUB1-201ENST00000413040 TBC1D2BQ9UPU7 963 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 STARD3NLO95772 234 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 TDRD7Q8NHU6 1098 aaKnown RBP16.14■□□□□ 0.17
NUB1-201ENST00000413040 TOMM22Q9NS69 142 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 PCDHA7Q9UN72 937 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 ARID5BQ14865 1188 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 STX1AQ16623 288 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 MAP7D2Q96T17 732 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 SPTLC3Q9NUV7 552 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 CLIC4Q9Y696 253 aa16.14■□□□□ 0.17
NUB1-201ENST00000413040 KIF1AQ12756 1690 aa16.13■□□□□ 0.17
NUB1-201ENST00000413040 RIOK3O14730 519 aaKnown RBP16.13■□□□□ 0.17
NUB1-201ENST00000413040 CAMTA1Q9Y6Y1 1673 aa16.13■□□□□ 0.17
NUB1-201ENST00000413040 SNAP23O00161 211 aa16.13■□□□□ 0.17
NUB1-201ENST00000413040 ZFYP08048 801 aaPredicted RBP16.13■□□□□ 0.17
NUB1-201ENST00000413040 FAM160A1Q05DH4 1040 aa16.13■□□□□ 0.17
NUB1-201ENST00000413040 TPD52L1Q16890 204 aaPredicted RBP16.13■□□□□ 0.17
NUB1-201ENST00000413040 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
NUB1-201ENST00000413040 CACTINQ8WUQ7 758 aaKnown RBP16.13■□□□□ 0.17
NUB1-201ENST00000413040 PIGBQ92521 554 aa16.13■□□□□ 0.17
NUB1-201ENST00000413040 AIFM3Q96NN9 605 aa16.13■□□□□ 0.17
NUB1-201ENST00000413040 ARFGEF2Q9Y6D5 1785 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
NUB1-201ENST00000413040 MARCKSP29966 332 aaPredicted RBP16.12■□□□□ 0.17
NUB1-201ENST00000413040 CCDC144BQ3MJ40 725 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 ZSCAN25Q6NSZ9 544 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 MICU3Q86XE3 530 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
NUB1-201ENST00000413040 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.171e-6■■■□□ 15.4
NUB1-201ENST00000413040 CTAGE5O15320 804 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 MCAMP43121 646 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 NFXL1Q6ZNB6 911 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 RBM43Q6ZSC3 357 aaKnown RBP16.12■□□□□ 0.17
NUB1-201ENST00000413040 CARD10Q9BWT7 1032 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 ATG3Q9NT62 314 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 ALS2Q96Q42 1657 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 ANKRD18BA2A2Z9 1011 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 PCCAP05165 728 aaPredicted RBP16.12■□□□□ 0.17
NUB1-201ENST00000413040 ZBTB38Q8NAP3 1195 aaPredicted RBP16.12■□□□□ 0.17
NUB1-201ENST00000413040 AGXT2Q9BYV1 514 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 ANO10Q9NW15 660 aa16.12■□□□□ 0.17
NUB1-201ENST00000413040 ADAMTS7Q9UKP4 1686 aa16.11■□□□□ 0.17
NUB1-201ENST00000413040 ILDR1Q86SU0 546 aaPredicted RBP16.11■□□□□ 0.17
NUB1-201ENST00000413040 CEP57L1Q8IYX8 460 aa16.11■□□□□ 0.17
NUB1-201ENST00000413040 SLAIN2Q9P270 581 aa16.11■□□□□ 0.17
NUB1-201ENST00000413040 IRS4O14654 1257 aaPredicted RBP16.11■□□□□ 0.17
NUB1-201ENST00000413040 TNNT1P13805 278 aa16.11■□□□□ 0.17
NUB1-201ENST00000413040 NDUFA8P51970 172 aa16.11■□□□□ 0.17
NUB1-201ENST00000413040 SNW1Q13573 536 aaKnown RBP16.11■□□□□ 0.17
NUB1-201ENST00000413040 MYL10Q9BUA6 226 aa16.11■□□□□ 0.17
NUB1-201ENST00000413040 INCENPQ9NQS7 918 aa16.11■□□□□ 0.17
NUB1-201ENST00000413040 B4E1Z4 1266 aa16.1■□□□□ 0.17
NUB1-201ENST00000413040 RRP12Q5JTH9 1297 aaKnown RBP16.1■□□□□ 0.17
NUB1-201ENST00000413040 PLA2G4DQ86XP0 818 aa16.1■□□□□ 0.17
NUB1-201ENST00000413040 TRMT1Q9NXH9 659 aaKnown RBP16.1■□□□□ 0.17
NUB1-201ENST00000413040 CPDO75976 1380 aa16.1■□□□□ 0.17
NUB1-201ENST00000413040 FOXP2O15409 715 aa16.1■□□□□ 0.17
NUB1-201ENST00000413040 IQCB1Q15051 598 aa16.1■□□□□ 0.17
NUB1-201ENST00000413040 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
NUB1-201ENST00000413040 PHKBQ93100 1093 aa16.1■□□□□ 0.17
NUB1-201ENST00000413040 CHMP4CQ96CF2 233 aa16.1■□□□□ 0.17
NUB1-201ENST00000413040 SPTLC2O15270 562 aa16.1■□□□□ 0.17
NUB1-201ENST00000413040 PHKA1P46020 1223 aa16.09■□□□□ 0.17
NUB1-201ENST00000413040 ANTXR2P58335 489 aa16.09■□□□□ 0.17
NUB1-201ENST00000413040 GIGYF2Q6Y7W6 1299 aaKnown RBP16.09■□□□□ 0.17
NUB1-201ENST00000413040 FBXO18Q8NFZ0 1043 aa16.09■□□□□ 0.17
NUB1-201ENST00000413040 TTLL11Q8NHH1 800 aa16.09■□□□□ 0.17
NUB1-201ENST00000413040 ZMYND15Q9H091 742 aa16.09■□□□□ 0.17
NUB1-201ENST00000413040 BCL2L12Q9HB09 334 aa16.09■□□□□ 0.17
NUB1-201ENST00000413040 ZBTB1Q9Y2K1 713 aa16.09■□□□□ 0.17
NUB1-201ENST00000413040 MB21D2Q8IYB1 491 aaPredicted RBP16.09■□□□□ 0.17
NUB1-201ENST00000413040 BTG4Q9NY30 223 aa16.09■□□□□ 0.17
NUB1-201ENST00000413040 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.17
NUB1-201ENST00000413040 SMC2O95347 1197 aa16.08■□□□□ 0.17
NUB1-201ENST00000413040 MYSM1Q5VVJ2 828 aa16.08■□□□□ 0.17
NUB1-201ENST00000413040 NLRP10Q86W26 655 aa16.08■□□□□ 0.17
NUB1-201ENST00000413040 LINC00301Q8NCQ3 95 aa16.08■□□□□ 0.17
NUB1-201ENST00000413040 AIDAQ96BJ3 306 aa16.08■□□□□ 0.17
NUB1-201ENST00000413040 ALG1Q9BT22 464 aa16.08■□□□□ 0.17
NUB1-201ENST00000413040 METAP2P50579 478 aaKnown RBP eCLIP16.08■□□□□ 0.16
NUB1-201ENST00000413040 PIH1D3Q9NQM4 214 aaKnown RBP16.08■□□□□ 0.16
NUB1-201ENST00000413040 ZNF532Q9HCE3 1301 aa16.08■□□□□ 0.16
NUB1-201ENST00000413040 SALL1Q9NSC2 1324 aa16.08■□□□□ 0.16
NUB1-201ENST00000413040 MAP3K15Q6ZN16 1313 aa16.08■□□□□ 0.16
NUB1-201ENST00000413040 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
NUB1-201ENST00000413040 ADALQ6DHV7 355 aa16.08■□□□□ 0.16
NUB1-201ENST00000413040 ENGASEQ8NFI3 743 aa16.08■□□□□ 0.16
NUB1-201ENST00000413040 HPS5Q9UPZ3 1129 aa16.08■□□□□ 0.16
NUB1-201ENST00000413040 KIF28PB7ZC32 967 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms