RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 CERS5Q8N5B7 392 aa17.19■□□□□ 0.34
CPNE1-206ENST00000412056 AGBL3Q8NEM8 1001 aa17.19■□□□□ 0.34
CPNE1-206ENST00000412056 GMLQ99445 158 aa17.19■□□□□ 0.34
CPNE1-206ENST00000412056 IL1RAPL2Q9NP60 686 aa17.19■□□□□ 0.34
CPNE1-206ENST00000412056 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
CPNE1-206ENST00000412056 MYO5AQ9Y4I1 1855 aaKnown RBP17.18■□□□□ 0.34
CPNE1-206ENST00000412056 RAB11FIP3O75154 756 aa17.18■□□□□ 0.34
CPNE1-206ENST00000412056 FRAT2O75474 233 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-206ENST00000412056 DPF2Q92785 391 aa17.18■□□□□ 0.34
CPNE1-206ENST00000412056 EAF2Q96CJ1 260 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-206ENST00000412056 KIF1BPQ96EK5 621 aa17.18■□□□□ 0.34
CPNE1-206ENST00000412056 DBNDD2Q9BQY9 259 aa17.18■□□□□ 0.34
CPNE1-206ENST00000412056 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
CPNE1-206ENST00000412056 TLR7Q9NYK1 1049 aaKnown RBP17.18■□□□□ 0.34
CPNE1-206ENST00000412056 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
CPNE1-206ENST00000412056 MYO3BQ8WXR4 1341 aa17.18■□□□□ 0.34
CPNE1-206ENST00000412056 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
CPNE1-206ENST00000412056 POTEIP0CG38 1075 aa17.17■□□□□ 0.34
CPNE1-206ENST00000412056 POTEJP0CG39 1038 aa17.17■□□□□ 0.34
CPNE1-206ENST00000412056 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-206ENST00000412056 EAPPQ56P03 285 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-206ENST00000412056 MFSD14BQ5SR56 506 aa17.16■□□□□ 0.34
CPNE1-206ENST00000412056 GORABQ5T7V8 394 aa17.16■□□□□ 0.34
CPNE1-206ENST00000412056 AACSQ86V21 672 aa17.16■□□□□ 0.34
CPNE1-206ENST00000412056 C16orf71Q8IYS4 520 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-206ENST00000412056 TRPM4Q8TD43 1214 aa17.16■□□□□ 0.34
CPNE1-206ENST00000412056 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
CPNE1-206ENST00000412056 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
CPNE1-206ENST00000412056 GNL3LQ9NVN8 582 aaKnown RBP17.16■□□□□ 0.34
CPNE1-206ENST00000412056 DBNLQ9UJU6 430 aaKnown RBP17.16■□□□□ 0.34
CPNE1-206ENST00000412056 H7C1D1 291 aa17.15■□□□□ 0.34
CPNE1-206ENST00000412056 SMARCA5O60264 1052 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-206ENST00000412056 EGFRP00533 1210 aa17.15■□□□□ 0.34
CPNE1-206ENST00000412056 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-206ENST00000412056 FKBP1AP62942 108 aaKnown RBP17.15■□□□□ 0.34
CPNE1-206ENST00000412056 RASGRF1Q13972 1273 aa17.15■□□□□ 0.34
CPNE1-206ENST00000412056 SAMD7Q7Z3H4 446 aa17.15■□□□□ 0.34
CPNE1-206ENST00000412056 KIAA0825Q8IV33 1275 aa17.15■□□□□ 0.34
CPNE1-206ENST00000412056 MYH2Q9UKX2 1941 aa17.14■□□□□ 0.33
CPNE1-206ENST00000412056 F8W031 263 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-206ENST00000412056 SEMA3EO15041 775 aa17.14■□□□□ 0.33
CPNE1-206ENST00000412056 USP17L8P0C7I0 530 aa17.14■□□□□ 0.33
CPNE1-206ENST00000412056 ARID4AP29374 1257 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-206ENST00000412056 ZNF280AP59817 542 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-206ENST00000412056 HDAC1Q13547 482 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-206ENST00000412056 GRIK5Q16478 980 aa17.14■□□□□ 0.33
CPNE1-206ENST00000412056 TBC1D10BQ4KMP7 808 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-206ENST00000412056 CLASRPQ8N2M8 674 aaKnown RBP17.14■□□□□ 0.33
CPNE1-206ENST00000412056 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
CPNE1-206ENST00000412056 DENND2AQ9ULE3 1009 aa17.14■□□□□ 0.33
CPNE1-206ENST00000412056 TOMM70O94826 608 aa17.13■□□□□ 0.33
CPNE1-206ENST00000412056 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-206ENST00000412056 SCARF1Q14162 830 aa17.13■□□□□ 0.33
CPNE1-206ENST00000412056 KIF4BQ2VIQ3 1234 aa17.13■□□□□ 0.33
CPNE1-206ENST00000412056 RBM26Q5T8P6 1007 aaKnown RBP17.13■□□□□ 0.33
CPNE1-206ENST00000412056 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
CPNE1-206ENST00000412056 USP50Q70EL3 339 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-206ENST00000412056 PNMA8AQ86V59 439 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-206ENST00000412056 ZBTB22O15209 634 aa17.12■□□□□ 0.33
CPNE1-206ENST00000412056 MCAMP43121 646 aa17.12■□□□□ 0.33
CPNE1-206ENST00000412056 TTC39AQ5SRH9 613 aa17.12■□□□□ 0.33
CPNE1-206ENST00000412056 RBM46Q8TBY0 533 aaKnown RBP17.12■□□□□ 0.33
CPNE1-206ENST00000412056 WDR66Q8TBY9 1149 aa17.12■□□□□ 0.33
CPNE1-206ENST00000412056 TBC1D22AQ8WUA7 517 aa17.12■□□□□ 0.33
CPNE1-206ENST00000412056 MAST2Q6P0Q8 1798 aa17.12■□□□□ 0.33
CPNE1-206ENST00000412056 DOCK2Q92608 1830 aa17.12■□□□□ 0.33
CPNE1-206ENST00000412056 IGHDP01880 384 aa17.11■□□□□ 0.33
CPNE1-206ENST00000412056 UQCRFS1P1P0C7P4 283 aa17.11■□□□□ 0.33
CPNE1-206ENST00000412056 CCDC158Q5M9N0 1113 aa17.11■□□□□ 0.33
CPNE1-206ENST00000412056 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
CPNE1-206ENST00000412056 MYOZ2Q9NPC6 264 aa17.11■□□□□ 0.33
CPNE1-206ENST00000412056 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
CPNE1-206ENST00000412056 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
CPNE1-206ENST00000412056 PDS5AQ29RF7 1337 aaKnown RBP17.11■□□□□ 0.33
CPNE1-206ENST00000412056 IFIT2P09913 472 aaKnown RBP17.1■□□□□ 0.33
CPNE1-206ENST00000412056 OGFOD1Q8N543 542 aa17.1■□□□□ 0.33
CPNE1-206ENST00000412056 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-206ENST00000412056 HDAC9Q9UKV0 1011 aa17.1■□□□□ 0.33
CPNE1-206ENST00000412056 TTF2Q9UNY4 1162 aaKnown RBP17.1■□□□□ 0.33
CPNE1-206ENST00000412056 TRPM7Q96QT4 1865 aa17.1■□□□□ 0.33
CPNE1-206ENST00000412056 PRDX5P30044 214 aa17.09■□□□□ 0.33
CPNE1-206ENST00000412056 CHADLQ6NUI6 762 aa17.09■□□□□ 0.33
CPNE1-206ENST00000412056 SPATA5Q8NB90 893 aa17.09■□□□□ 0.33
CPNE1-206ENST00000412056 SMC1BQ8NDV3 1235 aa17.09■□□□□ 0.33
CPNE1-206ENST00000412056 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
CPNE1-206ENST00000412056 SNRKQ9NRH2 765 aa17.09■□□□□ 0.33
CPNE1-206ENST00000412056 PCDHAC2Q9Y5I4 1007 aa17.09■□□□□ 0.33
CPNE1-206ENST00000412056 ASTN2O75129 1339 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-206ENST00000412056 SALL1Q9NSC2 1324 aa17.09■□□□□ 0.33
CPNE1-206ENST00000412056 MYH7P12883 1935 aa17.08■□□□□ 0.33
CPNE1-206ENST00000412056 MAP1SQ66K74 1059 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-206ENST00000412056 ZNF512BQ96KM6 892 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-206ENST00000412056 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
CPNE1-206ENST00000412056 SMC5Q8IY18 1101 aa17.07■□□□□ 0.32
CPNE1-206ENST00000412056 ZBED3Q96IU2 234 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-206ENST00000412056 ABCF2Q9UG63 623 aa17.07■□□□□ 0.32
CPNE1-206ENST00000412056 SUGT1Q9Y2Z0 365 aa17.07■□□□□ 0.32
CPNE1-206ENST00000412056 MAST3O60307 1309 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 WNT10BO00744 389 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 LDHBP07195 334 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms