RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 IQSEC3Q9UPP2 1182 aaPredicted RBP20.25■□□□□ 0.83
NOD1-202ENST00000411552 TFCP2Q12800 502 aa20.24■□□□□ 0.83
NOD1-202ENST00000411552 KIAA0825Q8IV33 1275 aa20.24■□□□□ 0.83
NOD1-202ENST00000411552 MYOZ2Q9NPC6 264 aa20.24■□□□□ 0.83
NOD1-202ENST00000411552 ZBTB40Q9NUA8 1239 aa20.24■□□□□ 0.83
NOD1-202ENST00000411552 FAM205AQ6ZU69 1335 aa20.24■□□□□ 0.83
NOD1-202ENST00000411552 POLR2AP24928 1970 aaKnown RBP20.23■□□□□ 0.83
NOD1-202ENST00000411552 G3BP1Q13283 466 aaKnown RBP eCLIP20.23■□□□□ 0.83
NOD1-202ENST00000411552 OGFOD1Q8N543 542 aa20.23■□□□□ 0.83
NOD1-202ENST00000411552 ARAP2Q8WZ64 1704 aa20.23■□□□□ 0.83
NOD1-202ENST00000411552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.23■□□□□ 0.83
NOD1-202ENST00000411552 FKBP1AP62942 108 aaKnown RBP20.22■□□□□ 0.83
NOD1-202ENST00000411552 HTRA3P83110 453 aa20.22■□□□□ 0.83
NOD1-202ENST00000411552 MYH13Q9UKX3 1938 aa20.21■□□□□ 0.83
NOD1-202ENST00000411552 ADORA1P30542 326 aa20.21■□□□□ 0.83
NOD1-202ENST00000411552 MFSD14BQ5SR56 506 aa20.21■□□□□ 0.83
NOD1-202ENST00000411552 CHMP4BQ9H444 224 aaKnown RBP20.21■□□□□ 0.83
NOD1-202ENST00000411552 ASTN2O75129 1339 aaPredicted RBP20.21■□□□□ 0.83
NOD1-202ENST00000411552 TRAF5O00463 557 aa20.2■□□□□ 0.82
NOD1-202ENST00000411552 FRAT2O75474 233 aaPredicted RBP20.2■□□□□ 0.82
NOD1-202ENST00000411552 SURF6O75683 361 aaKnown RBP20.2■□□□□ 0.82
NOD1-202ENST00000411552 MMP14P50281 582 aa20.2■□□□□ 0.82
NOD1-202ENST00000411552 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
NOD1-202ENST00000411552 TIMM10P62072 90 aa20.2■□□□□ 0.82
NOD1-202ENST00000411552 FMR1Q06787 632 aaKnown RBP eCLIP20.2■□□□□ 0.82
NOD1-202ENST00000411552 CHAF1AQ13111 956 aaPredicted RBP20.2■□□□□ 0.82
NOD1-202ENST00000411552 SCARF1Q14162 830 aa20.2■□□□□ 0.82
NOD1-202ENST00000411552 GLIS2Q9BZE0 524 aaPredicted RBP20.2■□□□□ 0.82
NOD1-202ENST00000411552 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
NOD1-202ENST00000411552 NOP58Q9Y2X3 529 aaKnown RBP20.2■□□□□ 0.82
NOD1-202ENST00000411552 A0A1B0GUL7 405 aa20.19■□□□□ 0.82
NOD1-202ENST00000411552 F8W031 263 aaPredicted RBP20.19■□□□□ 0.82
NOD1-202ENST00000411552 OS9Q13438 667 aaPredicted RBP20.19■□□□□ 0.82
NOD1-202ENST00000411552 GGA3Q9NZ52 723 aa20.19■□□□□ 0.82
NOD1-202ENST00000411552 HDAC9Q9UKV0 1011 aa20.19■□□□□ 0.82
NOD1-202ENST00000411552 TRPM7Q96QT4 1865 aa20.18■□□□□ 0.82
NOD1-202ENST00000411552 PHKA1P46020 1223 aa20.18■□□□□ 0.82
NOD1-202ENST00000411552 NBPF9Q3BBW0 867 aa20.18■□□□□ 0.82
NOD1-202ENST00000411552 DCPSQ96C86 337 aaKnown RBP20.18■□□□□ 0.82
NOD1-202ENST00000411552 COL1A1P02452 1464 aaPredicted RBP20.18■□□□□ 0.82
NOD1-202ENST00000411552 CDC37L1Q7L3B6 337 aa20.17■□□□□ 0.82
NOD1-202ENST00000411552 KRT26Q7Z3Y9 468 aa20.17■□□□□ 0.82
NOD1-202ENST00000411552 USP48Q86UV5 1035 aa20.17■□□□□ 0.82
NOD1-202ENST00000411552 SIRT2Q8IXJ6 389 aa20.17■□□□□ 0.82
NOD1-202ENST00000411552 RPAP2Q8IXW5 612 aaPredicted RBP20.17■□□□□ 0.82
NOD1-202ENST00000411552 XAGE2Q96GT9 111 aa20.17■□□□□ 0.82
NOD1-202ENST00000411552 WNT10BO00744 389 aa20.16■□□□□ 0.82
NOD1-202ENST00000411552 GRIK5Q16478 980 aa20.16■□□□□ 0.82
NOD1-202ENST00000411552 ANGEL2Q5VTE6 544 aaKnown RBP20.16■□□□□ 0.82
NOD1-202ENST00000411552 CCDC102BQ68D86 513 aa20.16■□□□□ 0.82
NOD1-202ENST00000411552 TBC1D22AQ8WUA7 517 aa20.16■□□□□ 0.82
NOD1-202ENST00000411552 ZBED3Q96IU2 234 aaPredicted RBP20.16■□□□□ 0.82
NOD1-202ENST00000411552 NEUROD6Q96NK8 337 aa20.16■□□□□ 0.82
NOD1-202ENST00000411552 CREBZFQ9NS37 354 aa20.16■□□□□ 0.82
NOD1-202ENST00000411552 GNL3LQ9NVN8 582 aaKnown RBP20.16■□□□□ 0.82
NOD1-202ENST00000411552 TMEM88BA6NKF7 163 aa20.15■□□□□ 0.82
NOD1-202ENST00000411552 DLK2Q6UY11 383 aa20.15■□□□□ 0.82
NOD1-202ENST00000411552 DNAJC5GQ8N7S2 189 aa20.15■□□□□ 0.82
NOD1-202ENST00000411552 TTF2Q9UNY4 1162 aaKnown RBP20.15■□□□□ 0.82
NOD1-202ENST00000411552 PCDHAC2Q9Y5I4 1007 aa20.15■□□□□ 0.82
NOD1-202ENST00000411552 ADM5C9JUS6 153 aa20.14■□□□□ 0.81
NOD1-202ENST00000411552 DLGAP5Q15398 846 aa20.14■□□□□ 0.81
NOD1-202ENST00000411552 CST9Q5W186 159 aa20.14■□□□□ 0.81
NOD1-202ENST00000411552 MTMR14Q8NCE2 650 aa20.14■□□□□ 0.81
NOD1-202ENST00000411552 GPR108Q9NPR9 543 aa20.14■□□□□ 0.81
NOD1-202ENST00000411552 EXOC6BQ9Y2D4 811 aa20.14■□□□□ 0.81
NOD1-202ENST00000411552 PITPNM2Q9BZ72 1349 aa20.13■□□□□ 0.81
NOD1-202ENST00000411552 SEMA3EO15041 775 aa20.13■□□□□ 0.81
NOD1-202ENST00000411552 HMMRO75330 724 aa20.13■□□□□ 0.81
NOD1-202ENST00000411552 CFAP100Q494V2 611 aa20.13■□□□□ 0.81
NOD1-202ENST00000411552 TNNI3KQ59H18 835 aa20.13■□□□□ 0.81
NOD1-202ENST00000411552 SULF1Q8IWU6 871 aa20.13■□□□□ 0.81
NOD1-202ENST00000411552 WDR66Q8TBY9 1149 aa20.13■□□□□ 0.81
NOD1-202ENST00000411552 DENND2AQ9ULE3 1009 aa20.13■□□□□ 0.81
NOD1-202ENST00000411552 FPGT-TNNI3KV9GXZ4 949 aa20.13■□□□□ 0.81
NOD1-202ENST00000411552 ECM29Q5VYK3 1845 aa20.12■□□□□ 0.81
NOD1-202ENST00000411552 SPDYE2BA6NHP3 402 aa20.12■□□□□ 0.81
NOD1-202ENST00000411552 ZBTB22O15209 634 aa20.12■□□□□ 0.81
NOD1-202ENST00000411552 CELF2O95319 508 aaKnown RBP20.12■□□□□ 0.81
NOD1-202ENST00000411552 SPDYE6P0CI01 402 aa20.12■□□□□ 0.81
NOD1-202ENST00000411552 RASGRF1Q13972 1273 aa20.12■□□□□ 0.81
NOD1-202ENST00000411552 GORABQ5T7V8 394 aa20.12■□□□□ 0.81
NOD1-202ENST00000411552 SCAF8Q9UPN6 1271 aaKnown RBP20.12■□□□□ 0.81
NOD1-202ENST00000411552 RBM5P52756 815 aaKnown RBP eCLIP20.11■□□□□ 0.81
NOD1-202ENST00000411552 ERC1Q8IUD2 1116 aa20.11■□□□□ 0.81
NOD1-202ENST00000411552 SERPINA10Q9UK55 444 aa20.11■□□□□ 0.81
NOD1-202ENST00000411552 SUGT1Q9Y2Z0 365 aa20.11■□□□□ 0.81
NOD1-202ENST00000411552 AOX1Q06278 1338 aa20.1■□□□□ 0.81
NOD1-202ENST00000411552 HSP90AB4PQ58FF6 505 aa20.1■□□□□ 0.81
NOD1-202ENST00000411552 KLRG1Q96E93 195 aa20.1■□□□□ 0.81
NOD1-202ENST00000411552 PRMT6Q96LA8 375 aaPredicted RBP20.1■□□□□ 0.81
NOD1-202ENST00000411552 ZNF408Q9H9D4 720 aa20.1■□□□□ 0.81
NOD1-202ENST00000411552 CRKP46108 304 aa20.09■□□□□ 0.81
NOD1-202ENST00000411552 DBNDD2Q9BQY9 259 aa20.09■□□□□ 0.81
NOD1-202ENST00000411552 PCNTO95613 3336 aa20.09■□□□□ 0.81
NOD1-202ENST00000411552 PDS5AQ29RF7 1337 aaKnown RBP20.08■□□□□ 0.81
NOD1-202ENST00000411552 SALL1Q9NSC2 1324 aa20.08■□□□□ 0.81
NOD1-202ENST00000411552 ARID4AP29374 1257 aaPredicted RBP20.08■□□□□ 0.81
NOD1-202ENST00000411552 HDLBPQ00341 1268 aaKnown RBP20.08■□□□□ 0.81
NOD1-202ENST00000411552 APOBEC3FQ8IUX4 373 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms