RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 PGAP2Q9UHJ9 254 aa38.65■■■■□ 3.78
TRAF3IP1-203ENST00000409739 FAM205AQ6ZU69 1335 aa38.64■■■■□ 3.78
TRAF3IP1-203ENST00000409739 ECM29Q5VYK3 1845 aa38.64■■■■□ 3.78
TRAF3IP1-203ENST00000409739 BCAMP50895 628 aa38.64■■■■□ 3.78
TRAF3IP1-203ENST00000409739 ZC3H15Q8WU90 426 aaKnown RBP38.64■■■■□ 3.78
TRAF3IP1-203ENST00000409739 ZBTB40Q9NUA8 1239 aa38.64■■■■□ 3.78
TRAF3IP1-203ENST00000409739 FKBP1AP62942 108 aaKnown RBP38.62■■■■□ 3.77
TRAF3IP1-203ENST00000409739 TFCP2Q12800 502 aa38.62■■■■□ 3.77
TRAF3IP1-203ENST00000409739 IQSEC3Q9UPP2 1182 aaPredicted RBP38.62■■■■□ 3.77
TRAF3IP1-203ENST00000409739 KIAA0825Q8IV33 1275 aa38.61■■■■□ 3.77
TRAF3IP1-203ENST00000409739 MYOZ2Q9NPC6 264 aa38.61■■■■□ 3.77
TRAF3IP1-203ENST00000409739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP38.61■■■■□ 3.77
TRAF3IP1-203ENST00000409739 G3BP1Q13283 466 aaKnown RBP eCLIP38.6■■■■□ 3.77
TRAF3IP1-203ENST00000409739 OGFOD1Q8N543 542 aa38.59■■■■□ 3.77
TRAF3IP1-203ENST00000409739 CHMP4BQ9H444 224 aaKnown RBP38.59■■■■□ 3.77
TRAF3IP1-203ENST00000409739 RRP1P56182 461 aaKnown RBP38.58■■■■□ 3.77
TRAF3IP1-203ENST00000409739 HTRA3P83110 453 aa38.57■■■■□ 3.76
TRAF3IP1-203ENST00000409739 COL1A1P02452 1464 aaPredicted RBP38.56■■■■□ 3.76
TRAF3IP1-203ENST00000409739 ADORA1P30542 326 aa38.56■■■■□ 3.76
TRAF3IP1-203ENST00000409739 MMP14P50281 582 aa38.56■■■■□ 3.76
TRAF3IP1-203ENST00000409739 MFSD14BQ5SR56 506 aa38.56■■■■□ 3.76
TRAF3IP1-203ENST00000409739 AKAP2Q9Y2D5 859 aa38.56■■■■□ 3.76
TRAF3IP1-203ENST00000409739 A0A1B0GUL7 405 aa38.55■■■■□ 3.76
TRAF3IP1-203ENST00000409739 FRAT2O75474 233 aaPredicted RBP38.55■■■■□ 3.76
TRAF3IP1-203ENST00000409739 SURF6O75683 361 aaKnown RBP38.55■■■■□ 3.76
TRAF3IP1-203ENST00000409739 HDAC9Q9UKV0 1011 aa38.55■■■■□ 3.76
TRAF3IP1-203ENST00000409739 NOP58Q9Y2X3 529 aaKnown RBP38.55■■■■□ 3.76
TRAF3IP1-203ENST00000409739 ASTN2O75129 1339 aaPredicted RBP38.55■■■■□ 3.76
TRAF3IP1-203ENST00000409739 CHAF1AQ13111 956 aaPredicted RBP38.54■■■■□ 3.76
TRAF3IP1-203ENST00000409739 GLIS2Q9BZE0 524 aaPredicted RBP38.54■■■■□ 3.76
TRAF3IP1-203ENST00000409739 TRAF5O00463 557 aa38.53■■■■□ 3.76
TRAF3IP1-203ENST00000409739 TIMM10P62072 90 aa38.53■■■■□ 3.76
TRAF3IP1-203ENST00000409739 FMR1Q06787 632 aaKnown RBP eCLIP38.53■■■■□ 3.76
TRAF3IP1-203ENST00000409739 GGA3Q9NZ52 723 aa38.53■■■■□ 3.76
TRAF3IP1-203ENST00000409739 F8W031 263 aaPredicted RBP38.52■■■■□ 3.76
TRAF3IP1-203ENST00000409739 OS9Q13438 667 aaPredicted RBP38.52■■■■□ 3.76
TRAF3IP1-203ENST00000409739 SCARF1Q14162 830 aa38.52■■■■□ 3.76
TRAF3IP1-203ENST00000409739 PHKA1P46020 1223 aa38.51■■■■□ 3.76
TRAF3IP1-203ENST00000409739 RPAP2Q8IXW5 612 aaPredicted RBP38.51■■■■□ 3.76
TRAF3IP1-203ENST00000409739 CDC37L1Q7L3B6 337 aa38.5■■■■□ 3.75
TRAF3IP1-203ENST00000409739 NBPF9Q3BBW0 867 aa38.49■■■■□ 3.75
TRAF3IP1-203ENST00000409739 SIRT2Q8IXJ6 389 aa38.49■■■■□ 3.75
TRAF3IP1-203ENST00000409739 TBC1D22AQ8WUA7 517 aa38.49■■■■□ 3.75
TRAF3IP1-203ENST00000409739 DCPSQ96C86 337 aaKnown RBP38.49■■■■□ 3.75
TRAF3IP1-203ENST00000409739 XAGE2Q96GT9 111 aa38.49■■■■□ 3.75
TRAF3IP1-203ENST00000409739 CREBZFQ9NS37 354 aa38.49■■■■□ 3.75
TRAF3IP1-203ENST00000409739 WNT10BO00744 389 aa38.48■■■■□ 3.75
TRAF3IP1-203ENST00000409739 CCDC102BQ68D86 513 aa38.48■■■■□ 3.75
TRAF3IP1-203ENST00000409739 ZBED3Q96IU2 234 aaPredicted RBP38.48■■■■□ 3.75
TRAF3IP1-203ENST00000409739 GNL3LQ9NVN8 582 aaKnown RBP38.48■■■■□ 3.75
TRAF3IP1-203ENST00000409739 ANGEL2Q5VTE6 544 aaKnown RBP38.47■■■■□ 3.75
TRAF3IP1-203ENST00000409739 KRT26Q7Z3Y9 468 aa38.47■■■■□ 3.75
TRAF3IP1-203ENST00000409739 GRIK5Q16478 980 aa38.46■■■■□ 3.75
TRAF3IP1-203ENST00000409739 USP48Q86UV5 1035 aa38.46■■■■□ 3.75
TRAF3IP1-203ENST00000409739 NEUROD6Q96NK8 337 aa38.46■■■■□ 3.75
TRAF3IP1-203ENST00000409739 PITPNM2Q9BZ72 1349 aa38.45■■■■□ 3.75
TRAF3IP1-203ENST00000409739 TMEM88BA6NKF7 163 aa38.45■■■■□ 3.75
TRAF3IP1-203ENST00000409739 GPR108Q9NPR9 543 aa38.45■■■■□ 3.75
TRAF3IP1-203ENST00000409739 TTF2Q9UNY4 1162 aaKnown RBP38.45■■■■□ 3.75
TRAF3IP1-203ENST00000409739 EXOC6BQ9Y2D4 811 aa38.45■■■■□ 3.75
TRAF3IP1-203ENST00000409739 ADM5C9JUS6 153 aa38.44■■■■□ 3.74
TRAF3IP1-203ENST00000409739 ZBTB22O15209 634 aa38.44■■■■□ 3.74
TRAF3IP1-203ENST00000409739 HMMRO75330 724 aa38.44■■■■□ 3.74
TRAF3IP1-203ENST00000409739 MTMR14Q8NCE2 650 aa38.44■■■■□ 3.74
TRAF3IP1-203ENST00000409739 SEMA3EO15041 775 aa38.43■■■■□ 3.74
TRAF3IP1-203ENST00000409739 DLGAP5Q15398 846 aa38.43■■■■□ 3.74
TRAF3IP1-203ENST00000409739 TNNI3KQ59H18 835 aa38.43■■■■□ 3.74
TRAF3IP1-203ENST00000409739 PCDHAC2Q9Y5I4 1007 aa38.43■■■■□ 3.74
TRAF3IP1-203ENST00000409739 FPGT-TNNI3KV9GXZ4 949 aa38.43■■■■□ 3.74
TRAF3IP1-203ENST00000409739 AKAP11Q9UKA4 1901 aa38.42■■■■□ 3.74
TRAF3IP1-203ENST00000409739 CFAP100Q494V2 611 aa38.42■■■■□ 3.74
TRAF3IP1-203ENST00000409739 DLK2Q6UY11 383 aa38.42■■■■□ 3.74
TRAF3IP1-203ENST00000409739 SULF1Q8IWU6 871 aa38.42■■■■□ 3.74
TRAF3IP1-203ENST00000409739 DNAJC5GQ8N7S2 189 aa38.42■■■■□ 3.74
TRAF3IP1-203ENST00000409739 WDR66Q8TBY9 1149 aa38.42■■■■□ 3.74
TRAF3IP1-203ENST00000409739 DENND2AQ9ULE3 1009 aa38.42■■■■□ 3.74
TRAF3IP1-203ENST00000409739 RASGRF1Q13972 1273 aa38.4■■■■□ 3.74
TRAF3IP1-203ENST00000409739 CST9Q5W186 159 aa38.4■■■■□ 3.74
TRAF3IP1-203ENST00000409739 SPDYE2BA6NHP3 402 aa38.39■■■■□ 3.74
TRAF3IP1-203ENST00000409739 SPDYE6P0CI01 402 aa38.39■■■■□ 3.74
TRAF3IP1-203ENST00000409739 ERC1Q8IUD2 1116 aa38.39■■■■□ 3.74
TRAF3IP1-203ENST00000409739 SERPINA10Q9UK55 444 aa38.39■■■■□ 3.74
TRAF3IP1-203ENST00000409739 SUGT1Q9Y2Z0 365 aa38.39■■■■□ 3.74
TRAF3IP1-203ENST00000409739 MYH2Q9UKX2 1941 aa38.38■■■■□ 3.73
TRAF3IP1-203ENST00000409739 HSP90AB4PQ58FF6 505 aa38.38■■■■□ 3.73
TRAF3IP1-203ENST00000409739 CELF2O95319 508 aaKnown RBP38.37■■■■□ 3.73
TRAF3IP1-203ENST00000409739 GORABQ5T7V8 394 aa38.37■■■■□ 3.73
TRAF3IP1-203ENST00000409739 SCAF8Q9UPN6 1271 aaKnown RBP38.37■■■■□ 3.73
TRAF3IP1-203ENST00000409739 PDS5AQ29RF7 1337 aaKnown RBP38.37■■■■□ 3.73
TRAF3IP1-203ENST00000409739 RBM5P52756 815 aaKnown RBP eCLIP38.36■■■■□ 3.73
TRAF3IP1-203ENST00000409739 PRMT6Q96LA8 375 aaPredicted RBP38.36■■■■□ 3.73
TRAF3IP1-203ENST00000409739 ZNF408Q9H9D4 720 aa38.36■■■■□ 3.73
TRAF3IP1-203ENST00000409739 AOX1Q06278 1338 aa38.36■■■■□ 3.73
TRAF3IP1-203ENST00000409739 SALL1Q9NSC2 1324 aa38.36■■■■□ 3.73
TRAF3IP1-203ENST00000409739 CRKP46108 304 aa38.35■■■■□ 3.73
TRAF3IP1-203ENST00000409739 KLRG1Q96E93 195 aa38.35■■■■□ 3.73
TRAF3IP1-203ENST00000409739 DBNDD2Q9BQY9 259 aa38.35■■■■□ 3.73
TRAF3IP1-203ENST00000409739 MAST3O60307 1309 aa38.35■■■■□ 3.73
TRAF3IP1-203ENST00000409739 ARID4AP29374 1257 aaPredicted RBP38.34■■■■□ 3.73
TRAF3IP1-203ENST00000409739 CRBNQ96SW2 442 aa38.34■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms