RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 PCDHAC2Q9Y5I4 1007 aa28.35■■■□□ 2.13
KDELR3-202ENST00000409006 AKAP11Q9UKA4 1901 aa28.34■■■□□ 2.13
KDELR3-202ENST00000409006 HDAC9Q9UKV0 1011 aa28.34■■■□□ 2.13
KDELR3-202ENST00000409006 LRRC24Q50LG9 513 aa28.33■■■□□ 2.13
KDELR3-202ENST00000409006 F8W031 263 aaPredicted RBP28.32■■■□□ 2.12
KDELR3-202ENST00000409006 GYG1P46976 350 aa28.32■■■□□ 2.12
KDELR3-202ENST00000409006 MMP14P50281 582 aa28.32■■■□□ 2.12
KDELR3-202ENST00000409006 UBE4AQ14139 1066 aa28.32■■■□□ 2.12
KDELR3-202ENST00000409006 KLHDC4Q8TBB5 520 aa28.32■■■□□ 2.12
KDELR3-202ENST00000409006 CCDC102AQ96A19 550 aa28.32■■■□□ 2.12
KDELR3-202ENST00000409006 SLC10A3P09131 477 aa28.31■■■□□ 2.12
KDELR3-202ENST00000409006 KIF23Q02241 960 aaPredicted RBP28.31■■■□□ 2.12
KDELR3-202ENST00000409006 FAM84BQ96KN1 310 aaPredicted RBP28.31■■■□□ 2.12
KDELR3-202ENST00000409006 ARAP2Q8WZ64 1704 aa28.3■■■□□ 2.12
KDELR3-202ENST00000409006 MROH5Q6ZUA9 1318 aa28.29■■■□□ 2.12
KDELR3-202ENST00000409006 FKBP1BP68106 108 aa28.29■■■□□ 2.12
KDELR3-202ENST00000409006 TDRD7Q8NHU6 1098 aaKnown RBP28.29■■■□□ 2.12
KDELR3-202ENST00000409006 NOB1Q9ULX3 412 aaKnown RBP28.29■■■□□ 2.12
KDELR3-202ENST00000409006 AOX1Q06278 1338 aa28.28■■■□□ 2.12
KDELR3-202ENST00000409006 UBE2Q2LH0YL09 131 aa28.28■■■□□ 2.12
KDELR3-202ENST00000409006 CA12O43570 354 aa28.28■■■□□ 2.12
KDELR3-202ENST00000409006 FKBP1AP62942 108 aaKnown RBP28.28■■■□□ 2.12
KDELR3-202ENST00000409006 DLGAP5Q15398 846 aa28.28■■■□□ 2.12
KDELR3-202ENST00000409006 RASAL3Q86YV0 1011 aa28.28■■■□□ 2.12
KDELR3-202ENST00000409006 FAM205AQ6ZU69 1335 aa28.27■■■□□ 2.12
KDELR3-202ENST00000409006 HIBADHP31937 336 aaKnown RBP28.27■■■□□ 2.12
KDELR3-202ENST00000409006 CFAP100Q494V2 611 aa28.27■■■□□ 2.12
KDELR3-202ENST00000409006 VGLL2Q8N8G2 317 aa28.27■■■□□ 2.12
KDELR3-202ENST00000409006 MTMR14Q8NCE2 650 aa28.27■■■□□ 2.12
KDELR3-202ENST00000409006 CT47B1P0C2W7 299 aaPredicted RBP28.26■■■□□ 2.11
KDELR3-202ENST00000409006 APOBEC3FQ8IUX4 373 aaKnown RBP28.26■■■□□ 2.11
KDELR3-202ENST00000409006 PRMT6Q96LA8 375 aaPredicted RBP28.26■■■□□ 2.11
KDELR3-202ENST00000409006 RFX5P48382 616 aaPredicted RBP28.25■■■□□ 2.11
KDELR3-202ENST00000409006 METTL24Q5JXM2 366 aa28.25■■■□□ 2.11
KDELR3-202ENST00000409006 CSRNP1Q96S65 589 aa28.25■■■□□ 2.11
KDELR3-202ENST00000409006 TTLL12Q14166 644 aaPredicted RBP28.24■■■□□ 2.11
KDELR3-202ENST00000409006 FBXO33Q7Z6M2 555 aa28.24■■■□□ 2.11
KDELR3-202ENST00000409006 PDE8BO95263 885 aa28.23■■■□□ 2.11
KDELR3-202ENST00000409006 PRKG1Q13976 671 aa28.23■■■□□ 2.11
KDELR3-202ENST00000409006 MFSD14BQ5SR56 506 aa28.23■■■□□ 2.11
KDELR3-202ENST00000409006 FZD1Q9UP38 647 aa28.23■■■□□ 2.11
KDELR3-202ENST00000409006 IQSEC3Q9UPP2 1182 aaPredicted RBP28.23■■■□□ 2.11
KDELR3-202ENST00000409006 CLRN2A0PK11 232 aa28.22■■■□□ 2.11
KDELR3-202ENST00000409006 SPDYE2BA6NHP3 402 aa28.22■■■□□ 2.11
KDELR3-202ENST00000409006 SPDYE6P0CI01 402 aa28.22■■■□□ 2.11
KDELR3-202ENST00000409006 RARSP54136 660 aaKnown RBP28.22■■■□□ 2.11
KDELR3-202ENST00000409006 DEFB129Q9H1M3 183 aa28.22■■■□□ 2.11
KDELR3-202ENST00000409006 MYH13Q9UKX3 1938 aa28.22■■■□□ 2.11
KDELR3-202ENST00000409006 NF2P35240 595 aa28.21■■■□□ 2.11
KDELR3-202ENST00000409006 GRIK5Q16478 980 aa28.21■■■□□ 2.11
KDELR3-202ENST00000409006 RNF186Q9NXI6 227 aa28.21■■■□□ 2.11
KDELR3-202ENST00000409006 PTPN12Q05209 780 aaKnown RBP28.2■■■□□ 2.1
KDELR3-202ENST00000409006 ABHD8Q96I13 439 aa28.2■■■□□ 2.1
KDELR3-202ENST00000409006 COL1A1P02452 1464 aaPredicted RBP28.2■■■□□ 2.1
KDELR3-202ENST00000409006 SSC5DA1L4H1 1573 aa28.2■■■□□ 2.1
KDELR3-202ENST00000409006 TRPA1O75762 1119 aa28.19■■■□□ 2.1
KDELR3-202ENST00000409006 RBM5P52756 815 aaKnown RBP eCLIP28.19■■■□□ 2.1
KDELR3-202ENST00000409006 TTF2Q9UNY4 1162 aaKnown RBP28.19■■■□□ 2.1
KDELR3-202ENST00000409006 EYA2O00167 538 aa28.18■■■□□ 2.1
KDELR3-202ENST00000409006 UBTFL1P0CB47 393 aaPredicted RBP28.18■■■□□ 2.1
KDELR3-202ENST00000409006 FGFR2P21802 821 aa28.18■■■□□ 2.1
KDELR3-202ENST00000409006 BCAMP50895 628 aa28.18■■■□□ 2.1
KDELR3-202ENST00000409006 API5Q9BZZ5 524 aaKnown RBP28.18■■■□□ 2.1
KDELR3-202ENST00000409006 ATG9AQ7Z3C6 839 aa28.17■■■□□ 2.1
KDELR3-202ENST00000409006 VPS37DQ86XT2 251 aa28.17■■■□□ 2.1
KDELR3-202ENST00000409006 VEZTQ9HBM0 779 aa28.17■■■□□ 2.1
KDELR3-202ENST00000409006 SAGE1Q9NXZ1 904 aa28.17■■■□□ 2.1
KDELR3-202ENST00000409006 MYO1BO43795 1136 aa28.16■■■□□ 2.1
KDELR3-202ENST00000409006 CHAF1AQ13111 956 aaPredicted RBP28.16■■■□□ 2.1
KDELR3-202ENST00000409006 ANGEL1Q9UNK9 670 aaKnown RBP28.16■■■□□ 2.1
KDELR3-202ENST00000409006 MKRN3Q13064 507 aaKnown RBP28.15■■■□□ 2.1
KDELR3-202ENST00000409006 CAVIN4Q5BKX8 364 aa28.15■■■□□ 2.1
KDELR3-202ENST00000409006 LDLRAD1Q5T700 205 aa28.15■■■□□ 2.1
KDELR3-202ENST00000409006 ARMC9Q7Z3E5 817 aa28.15■■■□□ 2.1
KDELR3-202ENST00000409006 MIER1Q8N108 512 aa28.15■■■□□ 2.1
KDELR3-202ENST00000409006 MEIS3Q99687 375 aa28.15■■■□□ 2.1
KDELR3-202ENST00000409006 LRRFIP2Q9Y608 721 aaKnown RBP28.15■■■□□ 2.1
KDELR3-202ENST00000409006 PUM3Q15397 648 aaKnown RBP28.14■■■□□ 2.1
KDELR3-202ENST00000409006 SERPINA10Q9UK55 444 aa28.14■■■□□ 2.1
KDELR3-202ENST00000409006 SPDYE2Q495Y8 402 aa28.13■■■□□ 2.09
KDELR3-202ENST00000409006 NBPF12Q5TAG4 269 aaPredicted RBP28.13■■■□□ 2.09
KDELR3-202ENST00000409006 SIL1Q9H173 461 aa28.13■■■□□ 2.09
KDELR3-202ENST00000409006 TDRD3Q9H7E2 651 aaKnown RBP28.13■■■□□ 2.09
KDELR3-202ENST00000409006 ZNF70Q9UC06 446 aaPredicted RBP28.13■■■□□ 2.09
KDELR3-202ENST00000409006 PPP2R3BQ9Y5P8 575 aa28.13■■■□□ 2.09
KDELR3-202ENST00000409006 CRKP46108 304 aa28.12■■■□□ 2.09
KDELR3-202ENST00000409006 RASA3Q14644 834 aa28.12■■■□□ 2.09
KDELR3-202ENST00000409006 REM2Q8IYK8 340 aaPredicted RBP28.12■■■□□ 2.09
KDELR3-202ENST00000409006 DZIP1LQ8IYY4 767 aaKnown RBP28.12■■■□□ 2.09
KDELR3-202ENST00000409006 MCOLN1Q9GZU1 580 aa28.12■■■□□ 2.09
KDELR3-202ENST00000409006 TNNQ9UQP3 1299 aa28.12■■■□□ 2.09
KDELR3-202ENST00000409006 OTOFQ9HC10 1997 aa28.11■■■□□ 2.09
KDELR3-202ENST00000409006 FRAT2O75474 233 aaPredicted RBP28.11■■■□□ 2.09
KDELR3-202ENST00000409006 IFIT1P09914 478 aaKnown RBP28.11■■■□□ 2.09
KDELR3-202ENST00000409006 ARHGAP45Q92619 1136 aa28.11■■■□□ 2.09
KDELR3-202ENST00000409006 MAP3K11Q16584 847 aa28.1■■■□□ 2.09
KDELR3-202ENST00000409006 INTS3Q68E01 1043 aaKnown RBP28.1■■■□□ 2.09
KDELR3-202ENST00000409006 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.1■■■□□ 2.09
KDELR3-202ENST00000409006 PA2G4Q9UQ80 394 aaKnown RBP28.1■■■□□ 2.09
KDELR3-202ENST00000409006 KIF16BQ96L93 1317 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms