RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 CERS3Q8IU89 383 aa18.97■□□□□ 0.63
LSP1-204ENST00000406638 CCAR2Q8N163 923 aaKnown RBP18.97■□□□□ 0.63
LSP1-204ENST00000406638 LEO1Q8WVC0 666 aaPredicted RBP18.97■□□□□ 0.63
LSP1-204ENST00000406638 ISCA1Q9BUE6 129 aa18.97■□□□□ 0.63
LSP1-204ENST00000406638 TEX13AQ9BXU3 409 aaPredicted RBP18.97■□□□□ 0.63
LSP1-204ENST00000406638 CRKLP46109 303 aaKnown RBP18.97■□□□□ 0.63
LSP1-204ENST00000406638 G3BP1Q13283 466 aaKnown RBP eCLIP18.97■□□□□ 0.63
LSP1-204ENST00000406638 KIF6Q6ZMV9 814 aa18.97■□□□□ 0.63
LSP1-204ENST00000406638 C11orf57Q6ZUT1 292 aaPredicted RBP18.97■□□□□ 0.63
LSP1-204ENST00000406638 CNTROBQ8N137 903 aa18.97■□□□□ 0.63
LSP1-204ENST00000406638 AFF2P51816 1311 aa18.97■□□□□ 0.63
LSP1-204ENST00000406638 PALLDQ8WX93 1383 aa18.97■□□□□ 0.63
LSP1-204ENST00000406638 CCZ1BP86790 482 aa18.96■□□□□ 0.63
LSP1-204ENST00000406638 CCZ1P86791 482 aaPredicted RBP18.96■□□□□ 0.63
LSP1-204ENST00000406638 RABL6Q3YEC7 729 aaPredicted RBP18.96■□□□□ 0.63
LSP1-204ENST00000406638 RBM43Q6ZSC3 357 aaKnown RBP18.96■□□□□ 0.63
LSP1-204ENST00000406638 PGBD1Q96JS3 809 aa18.96■□□□□ 0.63
LSP1-204ENST00000406638 TCEANC2Q96MN5 208 aa18.96■□□□□ 0.63
LSP1-204ENST00000406638 SCAND2PQ9GZW5 306 aaPredicted RBP18.96■□□□□ 0.63
LSP1-204ENST00000406638 AOX1Q06278 1338 aa18.96■□□□□ 0.63
LSP1-204ENST00000406638 POLR3GO15318 223 aaPredicted RBP18.96■□□□□ 0.63
LSP1-204ENST00000406638 CDC25BP30305 580 aa18.96■□□□□ 0.63
LSP1-204ENST00000406638 CLCN6P51797 869 aa18.96■□□□□ 0.63
LSP1-204ENST00000406638 FEZ2Q9UHY8 353 aaPredicted RBP18.96■□□□□ 0.63
LSP1-204ENST00000406638 MAP3K15Q6ZN16 1313 aa18.96■□□□□ 0.63
LSP1-204ENST00000406638 IQCB1Q15051 598 aa18.95■□□□□ 0.62
LSP1-204ENST00000406638 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
LSP1-204ENST00000406638 NDUFB9Q9Y6M9 179 aa18.95■□□□□ 0.62
LSP1-204ENST00000406638 SPATA31A6Q5VVP1 1343 aa18.95■□□□□ 0.62
LSP1-204ENST00000406638 H2AFXP16104 143 aaPredicted RBP18.95■□□□□ 0.62
LSP1-204ENST00000406638 RAD51AP2Q09MP3 1159 aa18.95■□□□□ 0.62
LSP1-204ENST00000406638 DZIP3Q86Y13 1208 aaKnown RBP18.95■□□□□ 0.62
LSP1-204ENST00000406638 CLASRPQ8N2M8 674 aaKnown RBP18.95■□□□□ 0.62
LSP1-204ENST00000406638 CCDC191Q8NCU4 936 aa18.95■□□□□ 0.62
LSP1-204ENST00000406638 NEK11Q8NG66 645 aa18.95■□□□□ 0.62
LSP1-204ENST00000406638 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.95■□□□□ 0.62
LSP1-204ENST00000406638 NEMFO60524 1076 aa18.94■□□□□ 0.62
LSP1-204ENST00000406638 TFCP2Q12800 502 aa18.94■□□□□ 0.62
LSP1-204ENST00000406638 TJP1Q07157 1748 aa18.94■□□□□ 0.62
LSP1-204ENST00000406638 PNMA6AP0CW24 399 aaPredicted RBP18.94■□□□□ 0.62
LSP1-204ENST00000406638 PLA2G4AP47712 749 aa18.94■□□□□ 0.62
LSP1-204ENST00000406638 PUS3Q9BZE2 481 aaKnown RBP18.94■□□□□ 0.62
LSP1-204ENST00000406638 GIGYF2Q6Y7W6 1299 aaKnown RBP18.93■□□□□ 0.62
LSP1-204ENST00000406638 MRFAP1L1Q96HT8 127 aa18.93■□□□□ 0.62
LSP1-204ENST00000406638 LRRC24Q50LG9 513 aa18.93■□□□□ 0.62
LSP1-204ENST00000406638 HSP90AB4PQ58FF6 505 aa18.93■□□□□ 0.62
LSP1-204ENST00000406638 FBXW7Q969H0 707 aa18.93■□□□□ 0.62
LSP1-204ENST00000406638 UBN2Q6ZU65 1347 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 IFIT2P09913 472 aaKnown RBP18.92■□□□□ 0.62
LSP1-204ENST00000406638 FAM193AP78312 1265 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 STK3Q13188 491 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 ARHGAP29Q52LW3 1261 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 GORABQ5T7V8 394 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 SYT10Q6XYQ8 523 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 BECN2A8MW95 431 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 CEBPZQ03701 1054 aaKnown RBP18.92■□□□□ 0.62
LSP1-204ENST00000406638 SNW1Q13573 536 aaKnown RBP18.92■□□□□ 0.62
LSP1-204ENST00000406638 NLRP10Q86W26 655 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 LINC00116Q8NCU8 138 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 EDC3Q96F86 508 aaKnown RBP18.92■□□□□ 0.62
LSP1-204ENST00000406638 GJD4Q96KN9 370 aaPredicted RBP18.92■□□□□ 0.62
LSP1-204ENST00000406638 CCDC87Q9NVE4 849 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 HDAC5Q9UQL6 1122 aa18.92■□□□□ 0.62
LSP1-204ENST00000406638 SARM1Q6SZW1 724 aa18.91■□□□□ 0.62
LSP1-204ENST00000406638 COPRSQ9NQ92 184 aa18.91■□□□□ 0.62
LSP1-204ENST00000406638 PDCP20941 246 aa18.91■□□□□ 0.62
LSP1-204ENST00000406638 EIF5P55010 431 aaKnown RBP18.91■□□□□ 0.62
LSP1-204ENST00000406638 CREBRFQ8IUR6 639 aa18.91■□□□□ 0.62
LSP1-204ENST00000406638 DDX11Q96FC9 970 aa18.91■□□□□ 0.62
LSP1-204ENST00000406638 MYH14Q7Z406 1995 aaKnown RBP18.9■□□□□ 0.62
LSP1-204ENST00000406638 RNF20Q5VTR2 975 aa18.9■□□□□ 0.62
LSP1-204ENST00000406638 ZFP91Q96JP5 570 aaPredicted RBP18.9■□□□□ 0.62
LSP1-204ENST00000406638 CHGBP05060 677 aa18.89■□□□□ 0.62
LSP1-204ENST00000406638 IL6STP40189 918 aaPredicted RBP18.89■□□□□ 0.62
LSP1-204ENST00000406638 ATG9AQ7Z3C6 839 aa18.89■□□□□ 0.62
LSP1-204ENST00000406638 AMIGO3Q86WK7 504 aa18.89■□□□□ 0.62
LSP1-204ENST00000406638 ZBTB9Q96C00 473 aa18.89■□□□□ 0.62
LSP1-204ENST00000406638 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.62
LSP1-204ENST00000406638 ZCCHC17Q9NP64 241 aaKnown RBP18.89■□□□□ 0.62
LSP1-204ENST00000406638 ZKSCAN1P17029 563 aaPredicted RBP18.89■□□□□ 0.61
LSP1-204ENST00000406638 E4F1Q66K89 784 aaPredicted RBP18.89■□□□□ 0.61
LSP1-204ENST00000406638 ERCC4Q92889 916 aaPredicted RBP18.89■□□□□ 0.61
LSP1-204ENST00000406638 TM6SF1Q9BZW5 370 aa18.89■□□□□ 0.61
LSP1-204ENST00000406638 ST5P78524 1137 aa18.88■□□□□ 0.61
LSP1-204ENST00000406638 ERC1Q8IUD2 1116 aa18.88■□□□□ 0.61
LSP1-204ENST00000406638 L2HGDHQ9H9P8 463 aa18.88■□□□□ 0.61
LSP1-204ENST00000406638 ECHDC1Q9NTX5 307 aa18.88■□□□□ 0.61
LSP1-204ENST00000406638 DBNLQ9UJU6 430 aaKnown RBP18.88■□□□□ 0.61
LSP1-204ENST00000406638 DBNDD2Q9BQY9 259 aa18.88■□□□□ 0.61
LSP1-204ENST00000406638 TSPYL1Q9H0U9 437 aa18.88■□□□□ 0.61
LSP1-204ENST00000406638 TNNT3P45378 269 aaPredicted RBP18.87■□□□□ 0.61
LSP1-204ENST00000406638 NECTIN1Q15223 517 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 TRMT112Q9UI30 125 aaKnown RBP18.87■□□□□ 0.61
LSP1-204ENST00000406638 RBM8AQ9Y5S9 174 aaKnown RBP18.87■□□□□ 0.61
LSP1-204ENST00000406638 SEC31AO94979 1220 aaKnown RBP18.87■□□□□ 0.61
LSP1-204ENST00000406638 CAVIN2O95810 425 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 TIMM10P62072 90 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 TEX35Q5T0J7 233 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 KRBA2Q6ZNG9 492 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 SEPT12Q8IYM1 358 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms