RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 COL1A1P02452 1464 aaPredicted RBP19.33■□□□□ 0.68
TPM1-207ENST00000403994 CAPN15O75808 1086 aa19.32■□□□□ 0.68
TPM1-207ENST00000403994 TSKSQ9UJT2 592 aa19.32■□□□□ 0.68
TPM1-207ENST00000403994 JAG2Q9Y219 1238 aa19.32■□□□□ 0.68
TPM1-207ENST00000403994 AKAP11Q9UKA4 1901 aa19.31■□□□□ 0.68
TPM1-207ENST00000403994 CA12O43570 354 aa19.31■□□□□ 0.68
TPM1-207ENST00000403994 SLC10A3P09131 477 aa19.31■□□□□ 0.68
TPM1-207ENST00000403994 ZNF157P51786 506 aaPredicted RBP19.31■□□□□ 0.68
TPM1-207ENST00000403994 FKBP1AP62942 108 aaKnown RBP19.31■□□□□ 0.68
TPM1-207ENST00000403994 FKBP1BP68106 108 aa19.31■□□□□ 0.68
TPM1-207ENST00000403994 LRRC24Q50LG9 513 aa19.31■□□□□ 0.68
TPM1-207ENST00000403994 GYG1P46976 350 aa19.3■□□□□ 0.68
TPM1-207ENST00000403994 PRAMEF18Q5VWM3 479 aa19.3■□□□□ 0.68
TPM1-207ENST00000403994 APOBEC3FQ8IUX4 373 aaKnown RBP19.3■□□□□ 0.68
TPM1-207ENST00000403994 VGLL2Q8N8G2 317 aa19.3■□□□□ 0.68
TPM1-207ENST00000403994 KLHDC4Q8TBB5 520 aa19.3■□□□□ 0.68
TPM1-207ENST00000403994 CCDC102AQ96A19 550 aa19.3■□□□□ 0.68
TPM1-207ENST00000403994 FAM205AQ6ZU69 1335 aa19.29■□□□□ 0.68
TPM1-207ENST00000403994 F8W031 263 aaPredicted RBP19.29■□□□□ 0.68
TPM1-207ENST00000403994 METTL24Q5JXM2 366 aa19.29■□□□□ 0.68
TPM1-207ENST00000403994 RASAL3Q86YV0 1011 aa19.29■□□□□ 0.68
TPM1-207ENST00000403994 MTMR14Q8NCE2 650 aa19.29■□□□□ 0.68
TPM1-207ENST00000403994 NOB1Q9ULX3 412 aaKnown RBP19.29■□□□□ 0.68
TPM1-207ENST00000403994 PCDHAC2Q9Y5I4 1007 aa19.29■□□□□ 0.68
TPM1-207ENST00000403994 KIF16BQ96L93 1317 aa19.28■□□□□ 0.68
TPM1-207ENST00000403994 SSC5DA1L4H1 1573 aa19.28■□□□□ 0.68
TPM1-207ENST00000403994 DLGAP5Q15398 846 aa19.28■□□□□ 0.68
TPM1-207ENST00000403994 MOB2Q70IA6 237 aa19.28■□□□□ 0.68
TPM1-207ENST00000403994 TDRD7Q8NHU6 1098 aaKnown RBP19.28■□□□□ 0.68
TPM1-207ENST00000403994 FAM84BQ96KN1 310 aaPredicted RBP19.28■□□□□ 0.68
TPM1-207ENST00000403994 CASP8AP2Q9UKL3 1982 aa19.28■□□□□ 0.68
TPM1-207ENST00000403994 SPDYE2BA6NHP3 402 aa19.27■□□□□ 0.68
TPM1-207ENST00000403994 SPDYE6P0CI01 402 aa19.27■□□□□ 0.68
TPM1-207ENST00000403994 HIBADHP31937 336 aaKnown RBP19.27■□□□□ 0.68
TPM1-207ENST00000403994 RARSP54136 660 aaKnown RBP19.27■□□□□ 0.68
TPM1-207ENST00000403994 MFSD14BQ5SR56 506 aa19.27■□□□□ 0.68
TPM1-207ENST00000403994 API5Q9BZZ5 524 aaKnown RBP19.27■□□□□ 0.68
TPM1-207ENST00000403994 LAMB1P07942 1786 aa19.27■□□□□ 0.67
TPM1-207ENST00000403994 AOX1Q06278 1338 aa19.26■□□□□ 0.67
TPM1-207ENST00000403994 OTOFQ9HC10 1997 aa19.26■□□□□ 0.67
TPM1-207ENST00000403994 PDE8BO95263 885 aa19.26■□□□□ 0.67
TPM1-207ENST00000403994 UBTFL1P0CB47 393 aaPredicted RBP19.26■□□□□ 0.67
TPM1-207ENST00000403994 RFX5P48382 616 aaPredicted RBP19.26■□□□□ 0.67
TPM1-207ENST00000403994 CFAP100Q494V2 611 aa19.26■□□□□ 0.67
TPM1-207ENST00000403994 NF2P35240 595 aa19.25■□□□□ 0.67
TPM1-207ENST00000403994 KIF23Q02241 960 aaPredicted RBP19.25■□□□□ 0.67
TPM1-207ENST00000403994 PTPN12Q05209 780 aaKnown RBP19.24■□□□□ 0.67
TPM1-207ENST00000403994 TTLL12Q14166 644 aaPredicted RBP19.24■□□□□ 0.67
TPM1-207ENST00000403994 PUM3Q15397 648 aaKnown RBP19.24■□□□□ 0.67
TPM1-207ENST00000403994 FBXO33Q7Z6M2 555 aa19.24■□□□□ 0.67
TPM1-207ENST00000403994 VPS37DQ86XT2 251 aa19.24■□□□□ 0.67
TPM1-207ENST00000403994 SAGE1Q9NXZ1 904 aa19.24■□□□□ 0.67
TPM1-207ENST00000403994 IQSEC3Q9UPP2 1182 aaPredicted RBP19.24■□□□□ 0.67
TPM1-207ENST00000403994 CLRN2A0PK11 232 aa19.23■□□□□ 0.67
TPM1-207ENST00000403994 UBE2Q2LH0YL09 131 aa19.23■□□□□ 0.67
TPM1-207ENST00000403994 DEFB129Q9H1M3 183 aa19.23■□□□□ 0.67
TPM1-207ENST00000403994 LRRFIP2Q9Y608 721 aaKnown RBP19.23■□□□□ 0.67
TPM1-207ENST00000403994 EYA2O00167 538 aa19.22■□□□□ 0.67
TPM1-207ENST00000403994 MYO1BO43795 1136 aa19.22■□□□□ 0.67
TPM1-207ENST00000403994 FGFR2P21802 821 aa19.22■□□□□ 0.67
TPM1-207ENST00000403994 CAVIN4Q5BKX8 364 aa19.22■□□□□ 0.67
TPM1-207ENST00000403994 PRMT6Q96LA8 375 aaPredicted RBP19.22■□□□□ 0.67
TPM1-207ENST00000403994 MEIS3Q99687 375 aa19.22■□□□□ 0.67
TPM1-207ENST00000403994 SERPINA10Q9UK55 444 aa19.22■□□□□ 0.67
TPM1-207ENST00000403994 TTF2Q9UNY4 1162 aaKnown RBP19.22■□□□□ 0.67
TPM1-207ENST00000403994 PPP2R3BQ9Y5P8 575 aa19.22■□□□□ 0.67
TPM1-207ENST00000403994 RBM5P52756 815 aaKnown RBP eCLIP19.21■□□□□ 0.67
TPM1-207ENST00000403994 CHAF1AQ13111 956 aaPredicted RBP19.21■□□□□ 0.67
TPM1-207ENST00000403994 ATG9AQ7Z3C6 839 aa19.21■□□□□ 0.67
TPM1-207ENST00000403994 MIER1Q8N108 512 aa19.21■□□□□ 0.67
TPM1-207ENST00000403994 ARHGAP45Q92619 1136 aa19.21■□□□□ 0.67
TPM1-207ENST00000403994 VEZTQ9HBM0 779 aa19.21■□□□□ 0.67
TPM1-207ENST00000403994 IFIT1P09914 478 aaKnown RBP19.2■□□□□ 0.66
TPM1-207ENST00000403994 BCAMP50895 628 aa19.2■□□□□ 0.66
TPM1-207ENST00000403994 PRKG1Q13976 671 aa19.2■□□□□ 0.66
TPM1-207ENST00000403994 GRIK5Q16478 980 aa19.2■□□□□ 0.66
TPM1-207ENST00000403994 CSRNP1Q96S65 589 aa19.2■□□□□ 0.66
TPM1-207ENST00000403994 SIL1Q9H173 461 aa19.2■□□□□ 0.66
TPM1-207ENST00000403994 SPDYE2Q495Y8 402 aa19.19■□□□□ 0.66
TPM1-207ENST00000403994 DIEXFQ68CQ4 756 aaKnown RBP19.19■□□□□ 0.66
TPM1-207ENST00000403994 INTS3Q68E01 1043 aaKnown RBP19.19■□□□□ 0.66
TPM1-207ENST00000403994 ARMC9Q7Z3E5 817 aa19.19■□□□□ 0.66
TPM1-207ENST00000403994 TBC1D22AQ8WUA7 517 aa19.19■□□□□ 0.66
TPM1-207ENST00000403994 ABHD8Q96I13 439 aa19.19■□□□□ 0.66
TPM1-207ENST00000403994 RNF186Q9NXI6 227 aa19.19■□□□□ 0.66
TPM1-207ENST00000403994 FZD1Q9UP38 647 aa19.19■□□□□ 0.66
TPM1-207ENST00000403994 FRAT2O75474 233 aaPredicted RBP19.18■□□□□ 0.66
TPM1-207ENST00000403994 CIAO1O76071 339 aa19.18■□□□□ 0.66
TPM1-207ENST00000403994 SLC5A1P13866 664 aa19.18■□□□□ 0.66
TPM1-207ENST00000403994 TRIM27P14373 513 aa19.18■□□□□ 0.66
TPM1-207ENST00000403994 REM2Q8IYK8 340 aaPredicted RBP19.18■□□□□ 0.66
TPM1-207ENST00000403994 LPIN2Q92539 896 aa19.18■□□□□ 0.66
TPM1-207ENST00000403994 FBXO3Q9UK99 471 aa19.18■□□□□ 0.66
TPM1-207ENST00000403994 ANGEL1Q9UNK9 670 aaKnown RBP19.18■□□□□ 0.66
TPM1-207ENST00000403994 TRPA1O75762 1119 aa19.17■□□□□ 0.66
TPM1-207ENST00000403994 CRKP46108 304 aa19.17■□□□□ 0.66
TPM1-207ENST00000403994 HNRNPUQ00839 825 aaKnown RBP eCLIP19.17■□□□□ 0.66
TPM1-207ENST00000403994 LDLRAD1Q5T700 205 aa19.17■□□□□ 0.66
TPM1-207ENST00000403994 DZIP1LQ8IYY4 767 aaKnown RBP19.17■□□□□ 0.66
TPM1-207ENST00000403994 ZNF70Q9UC06 446 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms