RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 WDR90Q96KV7 1748 aa16.84■□□□□ 0.29
VPREB1-202ENST00000403807 PHKA1P46020 1223 aa16.84■□□□□ 0.29
VPREB1-202ENST00000403807 MMP14P50281 582 aa16.84■□□□□ 0.29
VPREB1-202ENST00000403807 CCDC158Q5M9N0 1113 aa16.84■□□□□ 0.29
VPREB1-202ENST00000403807 EAF2Q96CJ1 260 aaPredicted RBP16.84■□□□□ 0.29
VPREB1-202ENST00000403807 GMLQ99445 158 aa16.84■□□□□ 0.29
VPREB1-202ENST00000403807 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
VPREB1-202ENST00000403807 IL1RAPL2Q9NP60 686 aa16.84■□□□□ 0.29
VPREB1-202ENST00000403807 ADARB2Q9NS39 739 aaKnown RBP16.84■□□□□ 0.29
VPREB1-202ENST00000403807 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
VPREB1-202ENST00000403807 SEMA3EO15041 775 aa16.83■□□□□ 0.28
VPREB1-202ENST00000403807 ZBTB22O15209 634 aa16.83■□□□□ 0.28
VPREB1-202ENST00000403807 USP17L8P0C7I0 530 aa16.83■□□□□ 0.28
VPREB1-202ENST00000403807 CHAF1AQ13111 956 aaPredicted RBP16.83■□□□□ 0.28
VPREB1-202ENST00000403807 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
VPREB1-202ENST00000403807 MICALL2Q8IY33 904 aa16.83■□□□□ 0.28
VPREB1-202ENST00000403807 OGFOD1Q8N543 542 aa16.83■□□□□ 0.28
VPREB1-202ENST00000403807 TBC1D22AQ8WUA7 517 aa16.83■□□□□ 0.28
VPREB1-202ENST00000403807 MXD3Q9BW11 206 aa16.83■□□□□ 0.28
VPREB1-202ENST00000403807 LRRCC1Q9C099 1032 aa16.83■□□□□ 0.28
VPREB1-202ENST00000403807 CCDC8Q9H0W5 538 aaPredicted RBP16.83■□□□□ 0.28
VPREB1-202ENST00000403807 JAG2Q9Y219 1238 aa16.83■□□□□ 0.28
VPREB1-202ENST00000403807 ZNF609O15014 1411 aa16.82■□□□□ 0.28
VPREB1-202ENST00000403807 TOMM70O94826 608 aa16.82■□□□□ 0.28
VPREB1-202ENST00000403807 MFSD14BQ5SR56 506 aa16.82■□□□□ 0.28
VPREB1-202ENST00000403807 USP50Q70EL3 339 aaPredicted RBP16.82■□□□□ 0.28
VPREB1-202ENST00000403807 AACSQ86V21 672 aa16.82■□□□□ 0.28
VPREB1-202ENST00000403807 WDR66Q8TBY9 1149 aa16.82■□□□□ 0.28
VPREB1-202ENST00000403807 DBNDD2Q9BQY9 259 aa16.82■□□□□ 0.28
VPREB1-202ENST00000403807 HDAC9Q9UKV0 1011 aa16.82■□□□□ 0.28
VPREB1-202ENST00000403807 SCN9AQ15858 1988 aa16.81■□□□□ 0.28
VPREB1-202ENST00000403807 IFIT2P09913 472 aaKnown RBP16.81■□□□□ 0.28
VPREB1-202ENST00000403807 UQCRFS1P1P0C7P4 283 aa16.81■□□□□ 0.28
VPREB1-202ENST00000403807 EAPPQ56P03 285 aaPredicted RBP16.81■□□□□ 0.28
VPREB1-202ENST00000403807 TTC39AQ5SRH9 613 aa16.81■□□□□ 0.28
VPREB1-202ENST00000403807 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
VPREB1-202ENST00000403807 BCL11AQ9H165 835 aa16.81■□□□□ 0.28
VPREB1-202ENST00000403807 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
VPREB1-202ENST00000403807 ZNF280AP59817 542 aaPredicted RBP16.8■□□□□ 0.28
VPREB1-202ENST00000403807 RBM26Q5T8P6 1007 aaKnown RBP16.8■□□□□ 0.28
VPREB1-202ENST00000403807 KIAA0825Q8IV33 1275 aa16.8■□□□□ 0.28
VPREB1-202ENST00000403807 CERS5Q8N5B7 392 aa16.8■□□□□ 0.28
VPREB1-202ENST00000403807 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
VPREB1-202ENST00000403807 DBNLQ9UJU6 430 aaKnown RBP16.8■□□□□ 0.28
VPREB1-202ENST00000403807 SCN4AP35499 1836 aa16.8■□□□□ 0.28
VPREB1-202ENST00000403807 SHTN1A0MZ66 631 aa16.79■□□□□ 0.28
VPREB1-202ENST00000403807 HSPA6P17066 643 aa16.79■□□□□ 0.28
VPREB1-202ENST00000403807 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
VPREB1-202ENST00000403807 SAMD7Q7Z3H4 446 aa16.79■□□□□ 0.28
VPREB1-202ENST00000403807 LDHDQ86WU2 507 aa16.79■□□□□ 0.28
VPREB1-202ENST00000403807 RBM46Q8TBY0 533 aaKnown RBP16.79■□□□□ 0.28
VPREB1-202ENST00000403807 ZNF512BQ96KM6 892 aaPredicted RBP16.79■□□□□ 0.28
VPREB1-202ENST00000403807 SUGT1Q9Y2Z0 365 aa16.79■□□□□ 0.28
VPREB1-202ENST00000403807 F8W031 263 aaPredicted RBP16.78■□□□□ 0.28
VPREB1-202ENST00000403807 SMARCA5O60264 1052 aaPredicted RBP16.78■□□□□ 0.28
VPREB1-202ENST00000403807 RASGRF1Q13972 1273 aa16.78■□□□□ 0.28
VPREB1-202ENST00000403807 TBC1D10BQ4KMP7 808 aaPredicted RBP16.78■□□□□ 0.28
VPREB1-202ENST00000403807 ZGPATQ8N5A5 531 aaKnown RBP16.78■□□□□ 0.28
VPREB1-202ENST00000403807 MYOZ2Q9NPC6 264 aa16.78■□□□□ 0.28
VPREB1-202ENST00000403807 TLR7Q9NYK1 1049 aaKnown RBP16.78■□□□□ 0.28
VPREB1-202ENST00000403807 PDS5AQ29RF7 1337 aaKnown RBP16.77■□□□□ 0.28
VPREB1-202ENST00000403807 KIF4BQ2VIQ3 1234 aa16.77■□□□□ 0.28
VPREB1-202ENST00000403807 SPATA5Q8NB90 893 aa16.77■□□□□ 0.28
VPREB1-202ENST00000403807 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.28
VPREB1-202ENST00000403807 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.28
VPREB1-202ENST00000403807 TTF2Q9UNY4 1162 aaKnown RBP16.77■□□□□ 0.28
VPREB1-202ENST00000403807 SALL1Q9NSC2 1324 aa16.76■□□□□ 0.27
VPREB1-202ENST00000403807 IGHDP01880 384 aa16.76■□□□□ 0.27
VPREB1-202ENST00000403807 NEFLP07196 543 aa16.76■□□□□ 0.27
VPREB1-202ENST00000403807 POTEIP0CG38 1075 aa16.76■□□□□ 0.27
VPREB1-202ENST00000403807 POTEJP0CG39 1038 aa16.76■□□□□ 0.27
VPREB1-202ENST00000403807 HIRAP54198 1017 aaPredicted RBP16.76■□□□□ 0.27
VPREB1-202ENST00000403807 ANKRD45Q5TZF3 282 aa16.76■□□□□ 0.27
VPREB1-202ENST00000403807 SPTY2D1Q68D10 685 aaPredicted RBP16.76■□□□□ 0.27
VPREB1-202ENST00000403807 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
VPREB1-202ENST00000403807 TRPM4Q8TD43 1214 aa16.76■□□□□ 0.27
VPREB1-202ENST00000403807 ZC3H15Q8WU90 426 aaKnown RBP16.76■□□□□ 0.27
VPREB1-202ENST00000403807 PSME4Q14997 1843 aa16.75■□□□□ 0.27
VPREB1-202ENST00000403807 LDHBP07195 334 aaKnown RBP16.75■□□□□ 0.27
VPREB1-202ENST00000403807 MCAMP43121 646 aa16.75■□□□□ 0.27
VPREB1-202ENST00000403807 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
VPREB1-202ENST00000403807 FSTL1Q12841 308 aa16.75■□□□□ 0.27
VPREB1-202ENST00000403807 DLGAP5Q15398 846 aa16.75■□□□□ 0.27
VPREB1-202ENST00000403807 MRIQ9BWK5 157 aa16.75■□□□□ 0.27
VPREB1-202ENST00000403807 MAST3O60307 1309 aa16.74■□□□□ 0.27
VPREB1-202ENST00000403807 EGFRP00533 1210 aa16.74■□□□□ 0.27
VPREB1-202ENST00000403807 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
VPREB1-202ENST00000403807 SCARF1Q14162 830 aa16.74■□□□□ 0.27
VPREB1-202ENST00000403807 MTMR14Q8NCE2 650 aa16.74■□□□□ 0.27
VPREB1-202ENST00000403807 ABCF2Q9UG63 623 aa16.74■□□□□ 0.27
VPREB1-202ENST00000403807 PGAP2Q9UHJ9 254 aa16.74■□□□□ 0.27
VPREB1-202ENST00000403807 SERPINA10Q9UK55 444 aa16.74■□□□□ 0.27
VPREB1-202ENST00000403807 ARAP2Q8WZ64 1704 aa16.73■□□□□ 0.27
VPREB1-202ENST00000403807 GRIK5Q16478 980 aa16.73■□□□□ 0.27
VPREB1-202ENST00000403807 CFAP100Q494V2 611 aa16.73■□□□□ 0.27
VPREB1-202ENST00000403807 PI16Q6UXB8 463 aa16.73■□□□□ 0.27
VPREB1-202ENST00000403807 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
VPREB1-202ENST00000403807 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
VPREB1-202ENST00000403807 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.73■□□□□ 0.27
VPREB1-202ENST00000403807 DCPSQ96C86 337 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms