RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 LMOD1P29536 600 aaPredicted RBP21.14■□□□□ 0.97
PTCHD3P3-201ENST00000403073 CERS5Q8N5B7 392 aa21.14■□□□□ 0.97
PTCHD3P3-201ENST00000403073 DPF2Q92785 391 aa21.14■□□□□ 0.97
PTCHD3P3-201ENST00000403073 GMLQ99445 158 aa21.14■□□□□ 0.97
PTCHD3P3-201ENST00000403073 LRRCC1Q9C099 1032 aa21.14■□□□□ 0.97
PTCHD3P3-201ENST00000403073 GNL3LQ9NVN8 582 aaKnown RBP21.14■□□□□ 0.97
PTCHD3P3-201ENST00000403073 CNOT7Q9UIV1 285 aaKnown RBP21.14■□□□□ 0.97
PTCHD3P3-201ENST00000403073 FAM205AQ6ZU69 1335 aa21.13■□□□□ 0.97
PTCHD3P3-201ENST00000403073 IQCA1LA6NCM1 817 aa21.13■□□□□ 0.97
PTCHD3P3-201ENST00000403073 CLASRPQ8N2M8 674 aaKnown RBP21.13■□□□□ 0.97
PTCHD3P3-201ENST00000403073 AGBL3Q8NEM8 1001 aa21.13■□□□□ 0.97
PTCHD3P3-201ENST00000403073 RWDD1Q9H446 243 aaPredicted RBP21.13■□□□□ 0.97
PTCHD3P3-201ENST00000403073 TAF1DQ9H5J8 278 aaPredicted RBP21.13■□□□□ 0.97
PTCHD3P3-201ENST00000403073 DBNLQ9UJU6 430 aaKnown RBP21.13■□□□□ 0.97
PTCHD3P3-201ENST00000403073 EPHX2P34913 555 aa21.12■□□□□ 0.97
PTCHD3P3-201ENST00000403073 MICALL2Q8IY33 904 aa21.12■□□□□ 0.97
PTCHD3P3-201ENST00000403073 SCN9AQ15858 1988 aa21.11■□□□□ 0.97
PTCHD3P3-201ENST00000403073 WDR90Q96KV7 1748 aa21.11■□□□□ 0.97
PTCHD3P3-201ENST00000403073 H7C1D1 291 aa21.1■□□□□ 0.97
PTCHD3P3-201ENST00000403073 IFIT2P09913 472 aaKnown RBP21.1■□□□□ 0.97
PTCHD3P3-201ENST00000403073 USP17L8P0C7I0 530 aa21.1■□□□□ 0.97
PTCHD3P3-201ENST00000403073 RASGRF1Q13972 1273 aa21.1■□□□□ 0.97
PTCHD3P3-201ENST00000403073 CCDC158Q5M9N0 1113 aa21.1■□□□□ 0.97
PTCHD3P3-201ENST00000403073 MFSD14BQ5SR56 506 aa21.1■□□□□ 0.97
PTCHD3P3-201ENST00000403073 TTC39AQ5SRH9 613 aa21.1■□□□□ 0.97
PTCHD3P3-201ENST00000403073 KIAA0825Q8IV33 1275 aa21.1■□□□□ 0.97
PTCHD3P3-201ENST00000403073 DENND2AQ9ULE3 1009 aa21.1■□□□□ 0.97
PTCHD3P3-201ENST00000403073 MYO3BQ8WXR4 1341 aa21.09■□□□□ 0.97
PTCHD3P3-201ENST00000403073 F8W031 263 aaPredicted RBP21.09■□□□□ 0.97
PTCHD3P3-201ENST00000403073 SEMA3EO15041 775 aa21.09■□□□□ 0.97
PTCHD3P3-201ENST00000403073 FKBP1AP62942 108 aaKnown RBP21.09■□□□□ 0.97
PTCHD3P3-201ENST00000403073 GRIK5Q16478 980 aa21.09■□□□□ 0.97
PTCHD3P3-201ENST00000403073 RBM26Q5T8P6 1007 aaKnown RBP21.09■□□□□ 0.97
PTCHD3P3-201ENST00000403073 SAMD7Q7Z3H4 446 aa21.09■□□□□ 0.97
PTCHD3P3-201ENST00000403073 COL1A1P02452 1464 aaPredicted RBP21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 UQCRFS1P1P0C7P4 283 aa21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 ARID4AP29374 1257 aaPredicted RBP21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 SCARF1Q14162 830 aa21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 EAPPQ56P03 285 aaPredicted RBP21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 PI16Q6UXB8 463 aa21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 C16orf71Q8IYS4 520 aaPredicted RBP21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 GCC1Q96CN9 775 aa21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 ADARB2Q9NS39 739 aaKnown RBP21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 HMG20BQ9P0W2 317 aa21.08■□□□□ 0.97
PTCHD3P3-201ENST00000403073 EGFRP00533 1210 aa21.07■□□□□ 0.96
PTCHD3P3-201ENST00000403073 POTEIP0CG38 1075 aa21.07■□□□□ 0.96
PTCHD3P3-201ENST00000403073 POTEJP0CG39 1038 aa21.07■□□□□ 0.96
PTCHD3P3-201ENST00000403073 ZNF280AP59817 542 aaPredicted RBP21.07■□□□□ 0.96
PTCHD3P3-201ENST00000403073 TBC1D10BQ4KMP7 808 aaPredicted RBP21.07■□□□□ 0.96
PTCHD3P3-201ENST00000403073 ANKRD45Q5TZF3 282 aa21.07■□□□□ 0.96
PTCHD3P3-201ENST00000403073 WDR66Q8TBY9 1149 aa21.07■□□□□ 0.96
PTCHD3P3-201ENST00000403073 TBC1D22AQ8WUA7 517 aa21.07■□□□□ 0.96
PTCHD3P3-201ENST00000403073 ZBTB22O15209 634 aa21.06■□□□□ 0.96
PTCHD3P3-201ENST00000403073 MCAMP43121 646 aa21.06■□□□□ 0.96
PTCHD3P3-201ENST00000403073 HIRAP54198 1017 aaPredicted RBP21.06■□□□□ 0.96
PTCHD3P3-201ENST00000403073 PNMA8AQ86V59 439 aaPredicted RBP21.06■□□□□ 0.96
PTCHD3P3-201ENST00000403073 OGFOD1Q8N543 542 aa21.06■□□□□ 0.96
PTCHD3P3-201ENST00000403073 SPATA5Q8NB90 893 aa21.06■□□□□ 0.96
PTCHD3P3-201ENST00000403073 TRPM4Q8TD43 1214 aa21.06■□□□□ 0.96
PTCHD3P3-201ENST00000403073 SNRKQ9NRH2 765 aa21.06■□□□□ 0.96
PTCHD3P3-201ENST00000403073 NEFLP07196 543 aa21.05■□□□□ 0.96
PTCHD3P3-201ENST00000403073 B4GALNT3Q6L9W6 998 aa21.05■□□□□ 0.96
PTCHD3P3-201ENST00000403073 USP50Q70EL3 339 aaPredicted RBP21.05■□□□□ 0.96
PTCHD3P3-201ENST00000403073 SMC5Q8IY18 1101 aa21.05■□□□□ 0.96
PTCHD3P3-201ENST00000403073 ZNF512BQ96KM6 892 aaPredicted RBP21.05■□□□□ 0.96
PTCHD3P3-201ENST00000403073 MYOZ2Q9NPC6 264 aa21.05■□□□□ 0.96
PTCHD3P3-201ENST00000403073 CLEC11AQ9Y240 323 aa21.05■□□□□ 0.96
PTCHD3P3-201ENST00000403073 ARAP2Q8WZ64 1704 aa21.04■□□□□ 0.96
PTCHD3P3-201ENST00000403073 TBC1D9Q6ZT07 1266 aa21.04■□□□□ 0.96
PTCHD3P3-201ENST00000403073 HDAC9Q9UKV0 1011 aa21.04■□□□□ 0.96
PTCHD3P3-201ENST00000403073 TTF2Q9UNY4 1162 aaKnown RBP21.04■□□□□ 0.96
PTCHD3P3-201ENST00000403073 TOMM70O94826 608 aa21.03■□□□□ 0.96
PTCHD3P3-201ENST00000403073 KIF4BQ2VIQ3 1234 aa21.03■□□□□ 0.96
PTCHD3P3-201ENST00000403073 PDS5AQ29RF7 1337 aaKnown RBP21.03■□□□□ 0.96
PTCHD3P3-201ENST00000403073 ZAP70P43403 619 aa21.02■□□□□ 0.96
PTCHD3P3-201ENST00000403073 ZBTB47Q9UFB7 747 aaPredicted RBP21.02■□□□□ 0.96
PTCHD3P3-201ENST00000403073 ABCF2Q9UG63 623 aa21.02■□□□□ 0.96
PTCHD3P3-201ENST00000403073 PCDHAC2Q9Y5I4 1007 aa21.02■□□□□ 0.96
PTCHD3P3-201ENST00000403073 NDUFB9Q9Y6M9 179 aa21.02■□□□□ 0.96
PTCHD3P3-201ENST00000403073 SALL1Q9NSC2 1324 aa21.02■□□□□ 0.95
PTCHD3P3-201ENST00000403073 PRDX5P30044 214 aa21.01■□□□□ 0.95
PTCHD3P3-201ENST00000403073 MMP14P50281 582 aa21.01■□□□□ 0.95
PTCHD3P3-201ENST00000403073 LDHDQ86WU2 507 aa21.01■□□□□ 0.95
PTCHD3P3-201ENST00000403073 OTUD7AQ8TE49 926 aaPredicted RBP21.01■□□□□ 0.95
PTCHD3P3-201ENST00000403073 ZNF646O15015 1829 aaPredicted RBP21.01■□□□□ 0.95
PTCHD3P3-201ENST00000403073 CYP2E1P05181 493 aaPredicted RBP21■□□□□ 0.95
PTCHD3P3-201ENST00000403073 LDHBP07195 334 aaKnown RBP21■□□□□ 0.95
PTCHD3P3-201ENST00000403073 NBPF9Q3BBW0 867 aa21■□□□□ 0.95
PTCHD3P3-201ENST00000403073 CFAP100Q494V2 611 aa21■□□□□ 0.95
PTCHD3P3-201ENST00000403073 RBM46Q8TBY0 533 aaKnown RBP21■□□□□ 0.95
PTCHD3P3-201ENST00000403073 SUGT1Q9Y2Z0 365 aa21■□□□□ 0.95
PTCHD3P3-201ENST00000403073 ASTN2O75129 1339 aaPredicted RBP21■□□□□ 0.95
PTCHD3P3-201ENST00000403073 SCN4AP35499 1836 aa20.99■□□□□ 0.95
PTCHD3P3-201ENST00000403073 PSME4Q14997 1843 aa20.99■□□□□ 0.95
PTCHD3P3-201ENST00000403073 RBM5P52756 815 aaKnown RBP eCLIP20.99■□□□□ 0.95
PTCHD3P3-201ENST00000403073 DLGAP5Q15398 846 aa20.99■□□□□ 0.95
PTCHD3P3-201ENST00000403073 CHADLQ6NUI6 762 aa20.99■□□□□ 0.95
PTCHD3P3-201ENST00000403073 ZGPATQ8N5A5 531 aaKnown RBP20.99■□□□□ 0.95
PTCHD3P3-201ENST00000403073 LNPKQ9C0E8 428 aa20.99■□□□□ 0.95
PTCHD3P3-201ENST00000403073 ECHDC1Q9NTX5 307 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms