RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 SCARF1Q14162 830 aa10.49□□□□□ -0.73
USP16-202ENST00000399973 DLK2Q6UY11 383 aa10.49□□□□□ -0.73
USP16-202ENST00000399973 ITPRIPQ8IWB1 547 aa10.49□□□□□ -0.73
USP16-202ENST00000399973 SULF1Q8IWU6 871 aa10.49□□□□□ -0.73
USP16-202ENST00000399973 GMLQ99445 158 aa10.49□□□□□ -0.73
USP16-202ENST00000399973 HDAC9Q9UKV0 1011 aa10.49□□□□□ -0.73
USP16-202ENST00000399973 PA2G4Q9UQ80 394 aaKnown RBP10.49□□□□□ -0.73
USP16-202ENST00000399973 PAPPA2Q9BXP8 1791 aa10.48□□□□□ -0.73
USP16-202ENST00000399973 SRGAP3O43295 1099 aa10.48□□□□□ -0.73
USP16-202ENST00000399973 PDE8BO95263 885 aa10.48□□□□□ -0.73
USP16-202ENST00000399973 GNAI2P04899 355 aa10.48□□□□□ -0.73
USP16-202ENST00000399973 SLC5A1P13866 664 aa10.48□□□□□ -0.73
USP16-202ENST00000399973 IL1R1P14778 569 aa10.48□□□□□ -0.73
USP16-202ENST00000399973 CHAF1AQ13111 956 aaPredicted RBP10.48□□□□□ -0.73
USP16-202ENST00000399973 PUM3Q15397 648 aaKnown RBP10.48□□□□□ -0.73
USP16-202ENST00000399973 CAVIN4Q5BKX8 364 aa10.48□□□□□ -0.73
USP16-202ENST00000399973 DZIP1LQ8IYY4 767 aaKnown RBP10.48□□□□□ -0.73
USP16-202ENST00000399973 CERS5Q8N5B7 392 aa10.48□□□□□ -0.73
USP16-202ENST00000399973 PGAP2Q9UHJ9 254 aa10.48□□□□□ -0.73
USP16-202ENST00000399973 SCAF8Q9UPN6 1271 aaKnown RBP10.48□□□□□ -0.73
USP16-202ENST00000399973 IFIT1P09914 478 aaKnown RBP10.47□□□□□ -0.73
USP16-202ENST00000399973 ATP2B3Q16720 1220 aa10.47□□□□□ -0.73
USP16-202ENST00000399973 DEFB115Q30KQ5 88 aa10.47□□□□□ -0.73
USP16-202ENST00000399973 NBPF9Q3BBW0 867 aa10.47□□□□□ -0.73
USP16-202ENST00000399973 VGLL2Q8N8G2 317 aa10.47□□□□□ -0.73
USP16-202ENST00000399973 FAM84BQ96KN1 310 aaPredicted RBP10.47□□□□□ -0.73
USP16-202ENST00000399973 C1orf115Q9H7X2 142 aa10.47□□□□□ -0.73
USP16-202ENST00000399973 RASSF10A6NK89 507 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 CIAO1O76071 339 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 VEGFBP49765 207 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 RBM5P52756 815 aaKnown RBP eCLIP10.46□□□□□ -0.73
USP16-202ENST00000399973 MFSD14BQ5SR56 506 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 CST9Q5W186 159 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 CYP4F22Q6NT55 531 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 ATG9AQ7Z3C6 839 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 JMYQ8N9B5 988 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 TDRD7Q8NHU6 1098 aaKnown RBP10.46□□□□□ -0.73
USP16-202ENST00000399973 CDCA5Q96FF9 252 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 YTHDC1Q96MU7 727 aaKnown RBP10.46□□□□□ -0.73
USP16-202ENST00000399973 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 TLL2Q9Y6L7 1015 aa10.46□□□□□ -0.73
USP16-202ENST00000399973 COL1A1P02452 1464 aaPredicted RBP10.46□□□□□ -0.74
USP16-202ENST00000399973 OTOFQ9HC10 1997 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 FAM205AQ6ZU69 1335 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 PITPNM2Q9BZ72 1349 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 WNT10BO00744 389 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 HSPA1AP0DMV8 641 aaKnown RBP10.45□□□□□ -0.74
USP16-202ENST00000399973 HSPA1BP0DMV9 641 aaKnown RBP10.45□□□□□ -0.74
USP16-202ENST00000399973 RLBP1P12271 317 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 IL15P40933 162 aaPredicted RBP10.45□□□□□ -0.74
USP16-202ENST00000399973 BCAMP50895 628 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 DLGAP5Q15398 846 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 PANK1Q8TE04 598 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 LPIN2Q92539 896 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 CAPNS2Q96L46 248 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 GBA2Q9HCG7 927 aaPredicted RBP10.45□□□□□ -0.74
USP16-202ENST00000399973 PCDHAC2Q9Y5I4 1007 aa10.45□□□□□ -0.74
USP16-202ENST00000399973 MAST2Q6P0Q8 1798 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 WDR33Q9C0J8 1336 aaKnown RBP10.44□□□□□ -0.74
USP16-202ENST00000399973 PNMA6EA0A0J9YXQ4 647 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 CLRN2A0PK11 232 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 FGFR2P21802 821 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 ECE1P42892 770 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 HUNKP57058 714 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 FKBP1AP62942 108 aaKnown RBP10.44□□□□□ -0.74
USP16-202ENST00000399973 OS9Q13438 667 aaPredicted RBP10.44□□□□□ -0.74
USP16-202ENST00000399973 MTX1Q13505 466 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 CFAP100Q494V2 611 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 APOBEC3FQ8IUX4 373 aaKnown RBP10.44□□□□□ -0.74
USP16-202ENST00000399973 C2orf69Q8N8R5 385 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 VEZTQ9HBM0 779 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 COPRSQ9NQ92 184 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 RCAN3Q9UKA8 241 aa10.44□□□□□ -0.74
USP16-202ENST00000399973 TTF2Q9UNY4 1162 aaKnown RBP10.44□□□□□ -0.74
USP16-202ENST00000399973 MYH2Q9UKX2 1941 aa10.43□□□□□ -0.74
USP16-202ENST00000399973 MYO1BO43795 1136 aa10.43□□□□□ -0.74
USP16-202ENST00000399973 TFCP2Q12800 502 aa10.43□□□□□ -0.74
USP16-202ENST00000399973 TTLL12Q14166 644 aaPredicted RBP10.43□□□□□ -0.74
USP16-202ENST00000399973 PRAMEF18Q5VWM3 479 aa10.43□□□□□ -0.74
USP16-202ENST00000399973 FBXO33Q7Z6M2 555 aa10.43□□□□□ -0.74
USP16-202ENST00000399973 SAPCD2Q86UD0 394 aa10.43□□□□□ -0.74
USP16-202ENST00000399973 AIDAQ96BJ3 306 aa10.43□□□□□ -0.74
USP16-202ENST00000399973 AK9Q5TCS8 1911 aa10.43□□□□□ -0.74
USP16-202ENST00000399973 SPDYE2BA6NHP3 402 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 AOC2O75106 756 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 SPDYE6P0CI01 402 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 MS4A1P11836 297 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 ADORA1P30542 326 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 NF2P35240 595 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 MMP14P50281 582 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 TBC1D22AQ8WUA7 517 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 GNL3LQ9NVN8 582 aaKnown RBP10.42□□□□□ -0.74
USP16-202ENST00000399973 AKAP11Q9UKA4 1901 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 DOCK2Q92608 1830 aa10.42□□□□□ -0.74
USP16-202ENST00000399973 AOX1Q06278 1338 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 A0A1B0GUL7 405 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 PHKA1P46020 1223 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 CRKP46108 304 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 G3BP1Q13283 466 aaKnown RBP eCLIP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms