RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 MICALCLQ6ZW33 695 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 EMILIN1Q9Y6C2 1016 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 PTPRKQ15262 1439 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 PLEKHH1Q9ULM0 1364 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 PPFIA3O75145 1194 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 IFRD2Q12894 506 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 MIGA1Q8NAN2 632 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 TEX11Q8IYF3 940 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 NUP62CLQ9H1M0 184 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 FAM169AQ9Y6X4 670 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 NSMCE1Q8WV22 266 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 BICRAQ9NZM4 1560 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 KDM2BQ8NHM5 1336 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 ANXA1P04083 346 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 STRN3Q13033 797 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 C2CD5Q86YS7 1000 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 KIFC2Q96AC6 838 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 KIF9Q9HAQ2 790 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 AS3MTQ9HBK9 375 aa12.4□□□□□ -0.42
CACNA1C-216ENST00000399638 ACEP12821 1306 aa12.4□□□□□ -0.43
CACNA1C-216ENST00000399638 ALDH1B1P30837 517 aa12.4□□□□□ -0.43
CACNA1C-216ENST00000399638 HINFPQ9BQA5 517 aa12.4□□□□□ -0.43
CACNA1C-216ENST00000399638 MED10Q9BTT4 135 aa12.4□□□□□ -0.43
CACNA1C-216ENST00000399638 USP16Q9Y5T5 823 aa12.4□□□□□ -0.43
CACNA1C-216ENST00000399638 C4orf50Q6ZRC1 276 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 FILIP1Q7Z7B0 1213 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 FERMT3Q86UX7 667 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 METTL13Q8N6R0 699 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 ESR2Q92731 530 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 DENND4BO75064 1496 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 OATP04181 439 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 BIRC3Q13489 604 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 GEN1Q17RS7 908 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 RSPH3Q86UC2 560 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 NCAPG2Q86XI2 1143 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 GANCQ8TET4 914 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 FNBP1Q96RU3 617 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 KRT23Q9C075 422 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 KRT5P13647 590 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 PPP2R5CQ13362 524 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 NCOA7Q8NI08 942 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 RIOK1Q9BRS2 568 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 CEP135Q66GS9 1140 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 TXNDC16Q9P2K2 825 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 TRPC3Q13507 836 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 FRMD4BQ9Y2L6 1034 aa12.39□□□□□ -0.43
CACNA1C-216ENST00000399638 NOL3O60936 208 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 DPP9Q86TI2 863 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 XAGE3Q8WTP9 111 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 EPSTI1Q96J88 318 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 IQCGQ9H095 443 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 MX1P20591 662 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 PLCB3Q01970 1234 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 CCDC6Q16204 474 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 SMC1BQ8NDV3 1235 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 ZEB2O60315 1214 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 MARCKSP29966 332 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 STAT6P42226 847 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 FBF1Q8TES7 1133 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 IFT74Q96LB3 600 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 RFC1P35251 1148 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 MICALL1Q8N3F8 863 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 MAGEB6Q8N7X4 407 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 HLTFQ14527 1009 aaKnown RBP eCLIP12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 TTC6Q86TZ1 520 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 TEX14Q8IWB6 1497 aa12.38□□□□□ -0.43
CACNA1C-216ENST00000399638 KRT9P35527 623 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 GNAQP50148 359 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 CTR9Q6PD62 1173 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 NSMFQ6X4W1 530 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 ARMC9Q7Z3E5 817 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 CCDC65Q8IXS2 484 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 A0A1W2PRG0 241 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 YEATS4O95619 227 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 TMPOP42166 694 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 PPARDQ03181 441 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 PARD3BQ8TEW8 1205 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 C19orf44Q9H6X5 657 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 IQGAP2Q13576 1575 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 SPECC1Q5M775 1068 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 ZNF569Q5MCW4 686 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 ELMSAN1Q6PJG2 1045 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 CEP120Q8N960 986 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 UVSSAQ2YD98 709 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 HAUS2Q9NVX0 235 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 KIF14Q15058 1648 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 KIF21AQ7Z4S6 1674 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 MAP7D1Q3KQU3 841 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 MAATS1Q7Z4T9 603 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 TMEM57Q8N5G2 664 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms