RNA–Protein interactions for RNA: ENST00000399367.7

ITSN1-212, Transcript of intersectin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITSN1, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-212ENST00000399367 PARP1P09874 1014 aaKnown RBP16.98■□□□□ 0.31
ITSN1-212ENST00000399367 SNW1Q13573 536 aaKnown RBP16.98■□□□□ 0.31
ITSN1-212ENST00000399367 TTC41PQ6P2S7 1318 aa16.98■□□□□ 0.31
ITSN1-212ENST00000399367 ARL1P40616 181 aaPredicted RBP16.98■□□□□ 0.31
ITSN1-212ENST00000399367 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
ITSN1-212ENST00000399367 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
ITSN1-212ENST00000399367 ZNF790Q6PG37 636 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 DDX17Q92841 729 aaKnown RBP16.97■□□□□ 0.31
ITSN1-212ENST00000399367 DDX21Q9NR30 783 aaKnown RBP eCLIP16.97■□□□□ 0.31
ITSN1-212ENST00000399367 CEP85Q6P2H3 762 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 HS2ST1Q7LGA3 356 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 PLVAPQ9BX97 442 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 ASXL1Q8IXJ9 1541 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 SYCP2Q9BX26 1530 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 CDCA7Q9BWT1 371 aaPredicted RBP16.97■□□□□ 0.31
ITSN1-212ENST00000399367 GGA1Q9UJY5 639 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.97■□□□□ 0.31
ITSN1-212ENST00000399367 TRAPPC8Q9Y2L5 1435 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 EEF2P13639 858 aaKnown RBP16.97■□□□□ 0.31
ITSN1-212ENST00000399367 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 NOD1Q9Y239 953 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 DNM1Q05193 864 aaKnown RBP16.97■□□□□ 0.31
ITSN1-212ENST00000399367 GRIPAP1Q4V328 841 aa16.97■□□□□ 0.31
ITSN1-212ENST00000399367 CTAGE1Q96RT6 745 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 SPTLC2O15270 562 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 POLR3GO15318 223 aaPredicted RBP16.96■□□□□ 0.31
ITSN1-212ENST00000399367 MRPS9P82933 396 aaKnown RBP16.96■□□□□ 0.31
ITSN1-212ENST00000399367 LRSAM1Q6UWE0 723 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 OTUD6BQ8N6M0 293 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 SH2D4AQ9H788 454 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 DACT1Q9NYF0 836 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 H0YIN7 160 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 ANO6Q4KMQ2 910 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 CREB3L3Q68CJ9 461 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 TMOD4Q9NZQ9 345 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 PARP10Q53GL7 1025 aa16.96■□□□□ 0.31
ITSN1-212ENST00000399367 DPP8Q6V1X1 898 aaPredicted RBP16.96■□□□□ 0.31
ITSN1-212ENST00000399367 ABCC1P33527 1531 aa16.96■□□□□ 0.3
ITSN1-212ENST00000399367 HARSP12081 509 aaKnown RBP16.95■□□□□ 0.3
ITSN1-212ENST00000399367 PPP1R14CQ8TAE6 165 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 TMEM110-MUSTN1A8MSY1 372 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 CYLC1P35663 651 aaPredicted RBP16.95■□□□□ 0.3
ITSN1-212ENST00000399367 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 A1BGP04217 495 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 USP48Q86UV5 1035 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 TBX22Q9Y458 520 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 GOLGA6L9A6NEM1 432 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 APBA3O96018 575 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 STX17P56962 302 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 SPAG1Q07617 926 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 PODXL2Q9NZ53 605 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 GINS2Q9Y248 185 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 CCDC171Q6TFL3 1326 aa16.95■□□□□ 0.3
ITSN1-212ENST00000399367 USP21Q9UK80 565 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 TAF5LO75529 589 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 CAVIN2O95810 425 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 LETM2Q2VYF4 491 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 PLBD2Q8NHP8 589 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 KLHDC4Q8TBB5 520 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 LRRC45Q96CN5 670 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 ZNF594Q96JF6 807 aaPredicted RBP16.94■□□□□ 0.3
ITSN1-212ENST00000399367 CCDC175P0C221 793 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 DHX32Q7L7V1 743 aaKnown RBP16.94■□□□□ 0.3
ITSN1-212ENST00000399367 EHBP1Q8NDI1 1231 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 CHMP2AO43633 222 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 PLCB3Q01970 1234 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 AOPEPQ8N6M6 819 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 ARMT1Q9H993 441 aa16.94■□□□□ 0.3
ITSN1-212ENST00000399367 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
ITSN1-212ENST00000399367 PTPDC1A2A3K4 754 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 TERF1P54274 439 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 AK2P54819 239 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 RNF187Q5TA31 235 aaPredicted RBP16.93■□□□□ 0.3
ITSN1-212ENST00000399367 A0A1W2PP64 1363 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 TRPM2O94759 1503 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 EYA2O00167 538 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 CTR9Q6PD62 1173 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 CGNQ9P2M7 1197 aaKnown RBP16.93■□□□□ 0.3
ITSN1-212ENST00000399367 F13A1P00488 732 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 ZSCAN23Q3MJ62 389 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 FERP16591 822 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 PUM3Q15397 648 aaKnown RBP16.93■□□□□ 0.3
ITSN1-212ENST00000399367 G2E3Q7L622 706 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 DNAJC25Q9H1X3 360 aa16.93■□□□□ 0.3
ITSN1-212ENST00000399367 PDE8AO60658 829 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 IVNS1ABPQ9Y6Y0 642 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 SOS1Q07889 1333 aaPredicted RBP16.92■□□□□ 0.3
ITSN1-212ENST00000399367 B4E1Z4 1266 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 PRDM1O75626 825 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 KLHL40Q2TBA0 621 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 CCDC129Q6ZRS4 1044 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 TRERF1Q96PN7 1200 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 DCTPP1Q9H773 170 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 ARHGEF10LQ9HCE6 1279 aa16.92■□□□□ 0.3
ITSN1-212ENST00000399367 TCP10Q12799 353 aa16.91■□□□□ 0.3
ITSN1-212ENST00000399367 GIGYF2Q6Y7W6 1299 aaKnown RBP16.91■□□□□ 0.3
ITSN1-212ENST00000399367 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms