RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 ADORA1P30542 326 aa12.87□□□□□ -0.35
CYCSP55-201ENST00000399027 GMPSP49915 693 aaPredicted RBP12.87□□□□□ -0.35
CYCSP55-201ENST00000399027 GTF2IP78347 998 aa12.87□□□□□ -0.35
CYCSP55-201ENST00000399027 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
CYCSP55-201ENST00000399027 GMLQ99445 158 aa12.87□□□□□ -0.35
CYCSP55-201ENST00000399027 GPRC5DQ9NZD1 345 aa12.87□□□□□ -0.35
CYCSP55-201ENST00000399027 HACL1Q9UJ83 578 aa12.87□□□□□ -0.35
CYCSP55-201ENST00000399027 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
CYCSP55-201ENST00000399027 PDS5AQ29RF7 1337 aaKnown RBP12.87□□□□□ -0.35
CYCSP55-201ENST00000399027 MAST2Q6P0Q8 1798 aa12.86□□□□□ -0.35
CYCSP55-201ENST00000399027 SEMA3EO15041 775 aa12.86□□□□□ -0.35
CYCSP55-201ENST00000399027 PHKA1P46020 1223 aa12.86□□□□□ -0.35
CYCSP55-201ENST00000399027 MMP14P50281 582 aa12.86□□□□□ -0.35
CYCSP55-201ENST00000399027 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
CYCSP55-201ENST00000399027 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
CYCSP55-201ENST00000399027 NEUROD6Q96NK8 337 aa12.86□□□□□ -0.35
CYCSP55-201ENST00000399027 GNL3LQ9NVN8 582 aaKnown RBP12.86□□□□□ -0.35
CYCSP55-201ENST00000399027 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 EPHX2P34913 555 aa12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 EPS15P42566 896 aa12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 CERS5Q8N5B7 392 aa12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 ZNF512BQ96KM6 892 aaPredicted RBP12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 DBNDD2Q9BQY9 259 aa12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 TAF1DQ9H5J8 278 aaPredicted RBP12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 CNOT7Q9UIV1 285 aaKnown RBP12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
CYCSP55-201ENST00000399027 MYH2Q9UKX2 1941 aa12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 POLR2AP24928 1970 aaKnown RBP12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 ZNF280AP59817 542 aaPredicted RBP12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 TBC1D22AQ8WUA7 517 aa12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 MXD3Q9BW11 206 aa12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 IL1RAPL2Q9NP60 686 aa12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 ADARB2Q9NS39 739 aaKnown RBP12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 TLR7Q9NYK1 1049 aaKnown RBP12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 DENND2AQ9ULE3 1009 aa12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 IQSEC3Q9UPP2 1182 aaPredicted RBP12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 SALL1Q9NSC2 1324 aa12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 MYH7P12883 1935 aa12.84□□□□□ -0.35
CYCSP55-201ENST00000399027 FRAT2O75474 233 aaPredicted RBP12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 UQCRFS1P1P0C7P4 283 aa12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 RASGRF1Q13972 1273 aa12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 CCDC158Q5M9N0 1113 aa12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 MFSD14BQ5SR56 506 aa12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 USP50Q70EL3 339 aaPredicted RBP12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 AACSQ86V21 672 aa12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 PNMA8AQ86V59 439 aaPredicted RBP12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 MICALL2Q8IY33 904 aa12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 WDR66Q8TBY9 1149 aa12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 FBXW7Q969H0 707 aa12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 RWDD1Q9H446 243 aaPredicted RBP12.83□□□□□ -0.36
CYCSP55-201ENST00000399027 SHTN1A0MZ66 631 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 H7C1D1 291 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 APBB1O00213 710 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 IGHDP01880 384 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 USP17L8P0C7I0 530 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 GORABQ5T7V8 394 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 SMC5Q8IY18 1101 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 JAG2Q9Y219 1238 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 SUGT1Q9Y2Z0 365 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 TRPM7Q96QT4 1865 aa12.82□□□□□ -0.36
CYCSP55-201ENST00000399027 TOMM70O94826 608 aa12.81□□□□□ -0.36
CYCSP55-201ENST00000399027 MCAMP43121 646 aa12.81□□□□□ -0.36
CYCSP55-201ENST00000399027 CHAF1AQ13111 956 aaPredicted RBP12.81□□□□□ -0.36
CYCSP55-201ENST00000399027 TTC39AQ5SRH9 613 aa12.81□□□□□ -0.36
CYCSP55-201ENST00000399027 KIAA0825Q8IV33 1275 aa12.81□□□□□ -0.36
CYCSP55-201ENST00000399027 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
CYCSP55-201ENST00000399027 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 EGFRP00533 1210 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 IFIT2P09913 472 aaKnown RBP12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 SCARF1Q14162 830 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 LDHDQ86WU2 507 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 C16orf71Q8IYS4 520 aaPredicted RBP12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 OGFOD1Q8N543 542 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 SPATA5Q8NB90 893 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 TRPM4Q8TD43 1214 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 MYOZ2Q9NPC6 264 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 PGAP2Q9UHJ9 254 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 HDAC9Q9UKV0 1011 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
CYCSP55-201ENST00000399027 FOCADQ5VW36 1801 aa12.79□□□□□ -0.36
CYCSP55-201ENST00000399027 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
CYCSP55-201ENST00000399027 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
CYCSP55-201ENST00000399027 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
CYCSP55-201ENST00000399027 GRIK5Q16478 980 aa12.79□□□□□ -0.36
CYCSP55-201ENST00000399027 KIF4BQ2VIQ3 1234 aa12.79□□□□□ -0.36
CYCSP55-201ENST00000399027 ZC3H15Q8WU90 426 aaKnown RBP12.79□□□□□ -0.36
CYCSP55-201ENST00000399027 ZBED3Q96IU2 234 aaPredicted RBP12.79□□□□□ -0.36
CYCSP55-201ENST00000399027 MRIQ9BWK5 157 aa12.79□□□□□ -0.36
CYCSP55-201ENST00000399027 MAST3O60307 1309 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms