RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 FAM89AQ96GI7 184 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 CRAMP1Q96RY5 1269 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 RPS8P62241 208 aaKnown RBP6.9□□□□□ -1.3
PTPRD-206ENST00000397617 MCTP2Q6DN12 878 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 ANKS1AQ92625 1134 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 TIAM2Q8IVF5 1701 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 ANXA1P04083 346 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 IFNAR1P17181 557 aa6.9□□□□□ -1.3
PTPRD-206ENST00000397617 RBM43Q6ZSC3 357 aaKnown RBP6.9□□□□□ -1.3
PTPRD-206ENST00000397617 ZNF396Q96N95 335 aaPredicted RBP6.9□□□□□ -1.3
PTPRD-206ENST00000397617 MAST3O60307 1309 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 FAM205AQ6ZU69 1335 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 SLC27A2O14975 620 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 SLC3A2P08195 630 aaKnown RBP6.9□□□□□ -1.31
PTPRD-206ENST00000397617 SYT1P21579 422 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 FKBP1AP62942 108 aaKnown RBP6.9□□□□□ -1.31
PTPRD-206ENST00000397617 INTS5Q6P9B9 1019 aaKnown RBP6.9□□□□□ -1.31
PTPRD-206ENST00000397617 SLC4A9Q96Q91 983 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 GLT8D2Q9H1C3 349 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 RTCBQ9Y3I0 505 aaKnown RBP6.9□□□□□ -1.31
PTPRD-206ENST00000397617 HSPD1P10809 573 aaKnown RBP6.9□□□□□ -1.31
PTPRD-206ENST00000397617 ITGA6P23229 1130 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 ADD2P35612 726 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 TRAPPC10P48553 1259 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 LZTS2Q9BRK4 669 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 TFCP2Q12800 502 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 GALNT17Q6IS24 598 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 ZBTB3Q9H5J0 574 aa6.9□□□□□ -1.31
PTPRD-206ENST00000397617 BTAF1O14981 1849 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 APBB1O00213 710 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 GSTO1P78417 241 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 ZNF772Q68DY9 489 aaPredicted RBP6.89□□□□□ -1.31
PTPRD-206ENST00000397617 GJD4Q96KN9 370 aaPredicted RBP6.89□□□□□ -1.31
PTPRD-206ENST00000397617 RCOR1Q9UKL0 485 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 DDX49Q9Y6V7 483 aaKnown RBP6.89□□□□□ -1.31
PTPRD-206ENST00000397617 CAVIN4Q5BKX8 364 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 FBXO18Q8NFZ0 1043 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 KCNG4Q8TDN1 519 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 XAGE2Q96GT9 111 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.89□□□□□ -1.31
PTPRD-206ENST00000397617 CHD4Q14839 1912 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 NMIQ13287 307 aaPredicted RBP6.89□□□□□ -1.31
PTPRD-206ENST00000397617 ANKRD18AQ8IVF6 992 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 RASEFQ8IZ41 740 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 SLC16A10Q8TF71 515 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 PPP1R9BQ96SB3 815 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 ROBO3Q96MS0 1386 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 ORC4O43929 436 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 SMARCA5O60264 1052 aaPredicted RBP6.89□□□□□ -1.31
PTPRD-206ENST00000397617 F13A1P00488 732 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 CYP21A2P08686 494 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 PDE6AP16499 860 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 DGKHQ86XP1 1220 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 CWC27Q6UX04 472 aaKnown RBP6.89□□□□□ -1.31
PTPRD-206ENST00000397617 POLR3EQ9NVU0 708 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 PNMA2Q9UL42 364 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 QSER1Q2KHR3 1735 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 SLC26A4O43511 780 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 NECTIN2Q92692 538 aa6.89□□□□□ -1.31
PTPRD-206ENST00000397617 JAKMIP1Q96N16 626 aaKnown RBP6.89□□□□□ -1.31
PTPRD-206ENST00000397617 AK2P54819 239 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 NUTM1Q86Y26 1132 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 ZBTB7CA1YPR0 619 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 CASTP20810 708 aaKnown RBP6.88□□□□□ -1.31
PTPRD-206ENST00000397617 BOLA2Q9H3K6 86 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 LMBRD1Q9NUN5 540 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 PALD1Q9ULE6 856 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 MAST2Q6P0Q8 1798 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 A0A0D9SFI3 127 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 FBXO33Q7Z6M2 555 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 STRBPQ96SI9 672 aaKnown RBP6.88□□□□□ -1.31
PTPRD-206ENST00000397617 CNNM1Q9NRU3 951 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 ATP6V1AP38606 617 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 CCDC102BQ68D86 513 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 RCSD1Q6JBY9 416 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 TIGD1Q96MW7 591 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 RNF26Q9BY78 433 aaPredicted RBP6.88□□□□□ -1.31
PTPRD-206ENST00000397617 MTMR6Q9Y217 621 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 XBP1P17861 261 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 CCDC173Q0VFZ6 552 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 CCDC183Q5T5S1 534 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 ESR2Q92731 530 aa6.88□□□□□ -1.31
PTPRD-206ENST00000397617 COL2A1P02458 1487 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-206ENST00000397617 ZPR1O75312 459 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 KCNJ6P48051 423 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 FOXR2Q6PJQ5 311 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 STAG1Q8WVM7 1258 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 SETDB2Q96T68 719 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 TRIM22Q8IYM9 498 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 XDHP47989 1333 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 A0A0U1RQG5 324 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-206ENST00000397617 ATP5J2-PTCD1G3V325 749 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 RBM6P78332 1123 aaKnown RBP6.87□□□□□ -1.31
PTPRD-206ENST00000397617 RILPL1Q5EBL4 403 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 PRPF40BQ6NWY9 871 aaKnown RBP6.87□□□□□ -1.31
PTPRD-206ENST00000397617 UPF3BQ9BZI7 483 aaKnown RBP6.87□□□□□ -1.31
PTPRD-206ENST00000397617 PA2G4Q9UQ80 394 aaKnown RBP6.87□□□□□ -1.31
PTPRD-206ENST00000397617 MYL1P05976 194 aa6.87□□□□□ -1.31
PTPRD-206ENST00000397617 LARP1BQ659C4 914 aaKnown RBP6.87□□□□□ -1.31
PTPRD-206ENST00000397617 MYH13Q9UKX3 1938 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms