RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 SREBF2Q12772 1141 aa15.2■□□□□ 0.02
SYNE4-203ENST00000397428 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
SYNE4-203ENST00000397428 R3HDMLQ9H3Y0 253 aa15.2■□□□□ 0.02
SYNE4-203ENST00000397428 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
SYNE4-203ENST00000397428 PRKG1Q13976 671 aa15.19■□□□□ 0.02
SYNE4-203ENST00000397428 EPHA10Q5JZY3 1008 aa15.19■□□□□ 0.02
SYNE4-203ENST00000397428 SLC10A4Q96EP9 437 aa15.19■□□□□ 0.02
SYNE4-203ENST00000397428 ANGEL1Q9UNK9 670 aaKnown RBP15.19■□□□□ 0.02
SYNE4-203ENST00000397428 F6X3S4 739 aa15.18■□□□□ 0.02
SYNE4-203ENST00000397428 LMBR1LQ6UX01 489 aa15.18■□□□□ 0.02
SYNE4-203ENST00000397428 PCDHAC2Q9Y5I4 1007 aa15.18■□□□□ 0.02
SYNE4-203ENST00000397428 PPP2R3BQ9Y5P8 575 aa15.18■□□□□ 0.02
SYNE4-203ENST00000397428 COL1A1P02452 1464 aaPredicted RBP15.17■□□□□ 0.02
SYNE4-203ENST00000397428 FKTNO75072 461 aa15.17■□□□□ 0.02
SYNE4-203ENST00000397428 ALDH1A1P00352 501 aa15.17■□□□□ 0.02
SYNE4-203ENST00000397428 SUPT20HL1Q3ZLR7 823 aa15.17■□□□□ 0.02
SYNE4-203ENST00000397428 FBXO46Q6PJ61 603 aaPredicted RBP15.17■□□□□ 0.02
SYNE4-203ENST00000397428 LDHAL6AQ6ZMR3 332 aa15.17■□□□□ 0.02
SYNE4-203ENST00000397428 ZNF804AQ7Z570 1209 aa15.17■□□□□ 0.02
SYNE4-203ENST00000397428 FZD1Q9UP38 647 aa15.17■□□□□ 0.02
SYNE4-203ENST00000397428 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
SYNE4-203ENST00000397428 MANSC4A6NHS7 340 aaPredicted RBP15.16■□□□□ 0.02
SYNE4-203ENST00000397428 PPP1R12BO60237 982 aaPredicted RBP15.16■□□□□ 0.02
SYNE4-203ENST00000397428 USP2O75604 605 aaPredicted RBP15.16■□□□□ 0.02
SYNE4-203ENST00000397428 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
SYNE4-203ENST00000397428 CCDC57Q2TAC2 916 aa15.16■□□□□ 0.02
SYNE4-203ENST00000397428 CFAP100Q494V2 611 aa15.16■□□□□ 0.02
SYNE4-203ENST00000397428 IFNL1Q8IU54 200 aa15.16■□□□□ 0.02
SYNE4-203ENST00000397428 TDRD7Q8NHU6 1098 aaKnown RBP15.16■□□□□ 0.02
SYNE4-203ENST00000397428 ZNF594Q96JF6 807 aaPredicted RBP15.16■□□□□ 0.02
SYNE4-203ENST00000397428 SPINK5Q9NQ38 1064 aaPredicted RBP15.16■□□□□ 0.02
SYNE4-203ENST00000397428 FAM205AQ6ZU69 1335 aa15.16■□□□□ 0.02
SYNE4-203ENST00000397428 GRM8O00222 908 aa15.15■□□□□ 0.02
SYNE4-203ENST00000397428 MYO1BO43795 1136 aa15.15■□□□□ 0.02
SYNE4-203ENST00000397428 ALDH1L1O75891 902 aa15.15■□□□□ 0.02
SYNE4-203ENST00000397428 ZBTB48P10074 688 aaPredicted RBP15.15■□□□□ 0.02
SYNE4-203ENST00000397428 WNK4Q96J92 1243 aa15.15■□□□□ 0.02
SYNE4-203ENST00000397428 CLMNQ96JQ2 1002 aa15.15■□□□□ 0.02
SYNE4-203ENST00000397428 MRS2Q9HD23 443 aa15.15■□□□□ 0.02
SYNE4-203ENST00000397428 SALL2Q9Y467 1007 aaPredicted RBP15.15■□□□□ 0.02
SYNE4-203ENST00000397428 AOX1Q06278 1338 aa15.15■□□□□ 0.02
SYNE4-203ENST00000397428 F8W031 263 aaPredicted RBP15.14■□□□□ 0.01
SYNE4-203ENST00000397428 PLIN1O60240 522 aa15.14■□□□□ 0.01
SYNE4-203ENST00000397428 UBE4AQ14139 1066 aa15.14■□□□□ 0.01
SYNE4-203ENST00000397428 NBPF12Q5TAG4 269 aaPredicted RBP15.14■□□□□ 0.01
SYNE4-203ENST00000397428 KAZALD1Q96I82 304 aa15.14■□□□□ 0.01
SYNE4-203ENST00000397428 CHMP3Q9Y3E7 222 aa15.14■□□□□ 0.01
SYNE4-203ENST00000397428 SSC5DA1L4H1 1573 aa15.14■□□□□ 0.01
SYNE4-203ENST00000397428 CLRN2A0PK11 232 aa15.13■□□□□ 0.01
SYNE4-203ENST00000397428 RASA3Q14644 834 aa15.13■□□□□ 0.01
SYNE4-203ENST00000397428 FAM84BQ96KN1 310 aaPredicted RBP15.13■□□□□ 0.01
SYNE4-203ENST00000397428 CNNM1Q9NRU3 951 aa15.13■□□□□ 0.01
SYNE4-203ENST00000397428 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
SYNE4-203ENST00000397428 PCDH10Q9P2E7 1040 aa15.13■□□□□ 0.01
SYNE4-203ENST00000397428 RIPOR2Q9Y4F9 1068 aa15.13■□□□□ 0.01
SYNE4-203ENST00000397428 A0A1B0GUL6 1792 aa15.13■□□□□ 0.01
SYNE4-203ENST00000397428 ECM29Q5VYK3 1845 aa15.13■□□□□ 0.01
SYNE4-203ENST00000397428 TESPA1A2RU30 521 aaPredicted RBP15.12■□□□□ 0.01
SYNE4-203ENST00000397428 IGF2BP3O00425 579 aaKnown RBP eCLIP15.12■□□□□ 0.01
SYNE4-203ENST00000397428 HIBADHP31937 336 aaKnown RBP15.12■□□□□ 0.01
SYNE4-203ENST00000397428 SERPINA10Q9UK55 444 aa15.12■□□□□ 0.01
SYNE4-203ENST00000397428 JAG2Q9Y219 1238 aa15.12■□□□□ 0.01
SYNE4-203ENST00000397428 GJA5P36382 358 aa15.11■□□□□ 0.01
SYNE4-203ENST00000397428 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
SYNE4-203ENST00000397428 TAF7LQ5H9L4 462 aa15.11■□□□□ 0.01
SYNE4-203ENST00000397428 PRPF38BQ5VTL8 546 aaKnown RBP15.11■□□□□ 0.01
SYNE4-203ENST00000397428 ANKRD13AQ8IZ07 590 aa15.11■□□□□ 0.01
SYNE4-203ENST00000397428 TEPSINQ96N21 525 aa15.11■□□□□ 0.01
SYNE4-203ENST00000397428 PTPN18Q99952 460 aa15.11■□□□□ 0.01
SYNE4-203ENST00000397428 PUS3Q9BZE2 481 aaKnown RBP15.11■□□□□ 0.01
SYNE4-203ENST00000397428 ZNF70Q9UC06 446 aaPredicted RBP15.11■□□□□ 0.01
SYNE4-203ENST00000397428 UTYO14607 1347 aa15.11■□□□□ 0.01
SYNE4-203ENST00000397428 LAMB1P07942 1786 aa15.11■□□□□ 0.01
SYNE4-203ENST00000397428 GYG1P46976 350 aa15.1■□□□□ 0.01
SYNE4-203ENST00000397428 IREB2P48200 963 aaKnown RBP15.1■□□□□ 0.01
SYNE4-203ENST00000397428 RBM5P52756 815 aaKnown RBP eCLIP15.1■□□□□ 0.01
SYNE4-203ENST00000397428 FBXO33Q7Z6M2 555 aa15.1■□□□□ 0.01
SYNE4-203ENST00000397428 SRCIN1Q9C0H9 1055 aa15.1■□□□□ 0.01
SYNE4-203ENST00000397428 TDRD3Q9H7E2 651 aaKnown RBP15.1■□□□□ 0.01
SYNE4-203ENST00000397428 VEZTQ9HBM0 779 aa15.1■□□□□ 0.01
SYNE4-203ENST00000397428 TTF2Q9UNY4 1162 aaKnown RBP15.1■□□□□ 0.01
SYNE4-203ENST00000397428 ANP32CO43423 234 aa15.09■□□□□ 0.01
SYNE4-203ENST00000397428 NBPF7P0C2Y1 421 aaPredicted RBP15.09■□□□□ 0.01
SYNE4-203ENST00000397428 MFSD14BQ5SR56 506 aa15.09■□□□□ 0.01
SYNE4-203ENST00000397428 INTS3Q68E01 1043 aaKnown RBP15.09■□□□□ 0.01
SYNE4-203ENST00000397428 OTUD7BQ6GQQ9 843 aa15.09■□□□□ 0.01
SYNE4-203ENST00000397428 OTOP1Q7RTM1 612 aa15.09■□□□□ 0.01
SYNE4-203ENST00000397428 DZIP1LQ8IYY4 767 aaKnown RBP15.09■□□□□ 0.01
SYNE4-203ENST00000397428 SUCLG2Q96I99 432 aa15.09■□□□□ 0.01
SYNE4-203ENST00000397428 MS4A4AQ96JQ5 239 aa15.09■□□□□ 0.01
SYNE4-203ENST00000397428 HDLBPQ00341 1268 aaKnown RBP15.08■□□□□ 0
SYNE4-203ENST00000397428 TNFAIP1Q13829 316 aa15.08■□□□□ 0
SYNE4-203ENST00000397428 RABL6Q3YEC7 729 aaPredicted RBP15.08■□□□□ 0
SYNE4-203ENST00000397428 SLC4A10Q6U841 1118 aa15.08■□□□□ 0
SYNE4-203ENST00000397428 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.08■□□□□ 0
SYNE4-203ENST00000397428 MRIQ9BWK5 157 aa15.08■□□□□ 0
SYNE4-203ENST00000397428 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.08■□□□□ 0
SYNE4-203ENST00000397428 TRIM17Q9Y577 477 aa15.08■□□□□ 0
SYNE4-203ENST00000397428 MROH5Q6ZUA9 1318 aa15.08■□□□□ 0
SYNE4-203ENST00000397428 CRKP46108 304 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms