RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TRPM4Q8TD43 1214 aa26.15■■□□□ 1.78
TSPAN4-206ENST00000397408 USP17L8P0C7I0 530 aa26.14■■□□□ 1.78
TSPAN4-206ENST00000397408 CERS5Q8N5B7 392 aa26.14■■□□□ 1.78
TSPAN4-206ENST00000397408 NEUROD6Q96NK8 337 aa26.14■■□□□ 1.78
TSPAN4-206ENST00000397408 PHKA1P46020 1223 aa26.14■■□□□ 1.77
TSPAN4-206ENST00000397408 CHAF1AQ13111 956 aaPredicted RBP26.14■■□□□ 1.77
TSPAN4-206ENST00000397408 HSP90AB4PQ58FF6 505 aa26.14■■□□□ 1.77
TSPAN4-206ENST00000397408 TNNI3KQ59H18 835 aa26.14■■□□□ 1.77
TSPAN4-206ENST00000397408 SAMD7Q7Z3H4 446 aa26.14■■□□□ 1.77
TSPAN4-206ENST00000397408 ERC1Q8IUD2 1116 aa26.14■■□□□ 1.77
TSPAN4-206ENST00000397408 XAGE2Q96GT9 111 aa26.14■■□□□ 1.77
TSPAN4-206ENST00000397408 CLEC11AQ9Y240 323 aa26.14■■□□□ 1.77
TSPAN4-206ENST00000397408 FPGT-TNNI3KV9GXZ4 949 aa26.14■■□□□ 1.77
TSPAN4-206ENST00000397408 MYH13Q9UKX3 1938 aa26.13■■□□□ 1.77
TSPAN4-206ENST00000397408 TBC1D10BQ4KMP7 808 aaPredicted RBP26.13■■□□□ 1.77
TSPAN4-206ENST00000397408 CHADLQ6NUI6 762 aa26.13■■□□□ 1.77
TSPAN4-206ENST00000397408 KIAA0825Q8IV33 1275 aa26.13■■□□□ 1.77
TSPAN4-206ENST00000397408 GPR108Q9NPR9 543 aa26.13■■□□□ 1.77
TSPAN4-206ENST00000397408 EGFRP00533 1210 aa26.12■■□□□ 1.77
TSPAN4-206ENST00000397408 ZNF280AP59817 542 aaPredicted RBP26.12■■□□□ 1.77
TSPAN4-206ENST00000397408 FKBP1AP62942 108 aaKnown RBP26.12■■□□□ 1.77
TSPAN4-206ENST00000397408 MFSD14BQ5SR56 506 aa26.12■■□□□ 1.77
TSPAN4-206ENST00000397408 CCDC102BQ68D86 513 aa26.12■■□□□ 1.77
TSPAN4-206ENST00000397408 GNL3LQ9NVN8 582 aaKnown RBP26.12■■□□□ 1.77
TSPAN4-206ENST00000397408 COL1A1P02452 1464 aaPredicted RBP26.11■■□□□ 1.77
TSPAN4-206ENST00000397408 APBB1O00213 710 aa26.11■■□□□ 1.77
TSPAN4-206ENST00000397408 FSTL1Q12841 308 aa26.11■■□□□ 1.77
TSPAN4-206ENST00000397408 KIF4BQ2VIQ3 1234 aa26.11■■□□□ 1.77
TSPAN4-206ENST00000397408 RBM26Q5T8P6 1007 aaKnown RBP26.11■■□□□ 1.77
TSPAN4-206ENST00000397408 PCDHB15Q9Y5E8 787 aa26.11■■□□□ 1.77
TSPAN4-206ENST00000397408 HIRAP54198 1017 aaPredicted RBP26.1■■□□□ 1.77
TSPAN4-206ENST00000397408 OGFOD1Q8N543 542 aa26.1■■□□□ 1.77
TSPAN4-206ENST00000397408 GORABQ5T7V8 394 aa26.09■■□□□ 1.77
TSPAN4-206ENST00000397408 RHPN1Q8TCX5 695 aa26.09■■□□□ 1.77
TSPAN4-206ENST00000397408 MYOZ2Q9NPC6 264 aa26.09■■□□□ 1.77
TSPAN4-206ENST00000397408 F8W031 263 aaPredicted RBP26.08■■□□□ 1.77
TSPAN4-206ENST00000397408 HDAC9Q9UKV0 1011 aa26.08■■□□□ 1.77
TSPAN4-206ENST00000397408 SEMA3EO15041 775 aa26.07■■□□□ 1.76
TSPAN4-206ENST00000397408 MAP1SQ66K74 1059 aaPredicted RBP26.07■■□□□ 1.76
TSPAN4-206ENST00000397408 TBC1D22AQ8WUA7 517 aa26.07■■□□□ 1.76
TSPAN4-206ENST00000397408 KIF1BPQ96EK5 621 aa26.07■■□□□ 1.76
TSPAN4-206ENST00000397408 DBNDD2Q9BQY9 259 aa26.07■■□□□ 1.76
TSPAN4-206ENST00000397408 IL1RAPL2Q9NP60 686 aa26.07■■□□□ 1.76
TSPAN4-206ENST00000397408 RAB11FIP3O75154 756 aa26.06■■□□□ 1.76
TSPAN4-206ENST00000397408 EXOC6Q8TAG9 804 aa26.06■■□□□ 1.76
TSPAN4-206ENST00000397408 EAF2Q96CJ1 260 aaPredicted RBP26.06■■□□□ 1.76
TSPAN4-206ENST00000397408 RASGRF1Q13972 1273 aa26.05■■□□□ 1.76
TSPAN4-206ENST00000397408 TLR7Q9NYK1 1049 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-206ENST00000397408 DENND2AQ9ULE3 1009 aa26.05■■□□□ 1.76
TSPAN4-206ENST00000397408 MMP14P50281 582 aa26.05■■□□□ 1.76
TSPAN4-206ENST00000397408 AACSQ86V21 672 aa26.05■■□□□ 1.76
TSPAN4-206ENST00000397408 WDR66Q8TBY9 1149 aa26.05■■□□□ 1.76
TSPAN4-206ENST00000397408 ZC3H15Q8WU90 426 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-206ENST00000397408 CCDC8Q9H0W5 538 aaPredicted RBP26.05■■□□□ 1.76
TSPAN4-206ENST00000397408 DBNLQ9UJU6 430 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-206ENST00000397408 ZBTB22O15209 634 aa26.04■■□□□ 1.76
TSPAN4-206ENST00000397408 IRX6P78412 446 aaPredicted RBP26.04■■□□□ 1.76
TSPAN4-206ENST00000397408 AAMPQ13685 434 aa26.04■■□□□ 1.76
TSPAN4-206ENST00000397408 GRIK5Q16478 980 aa26.04■■□□□ 1.76
TSPAN4-206ENST00000397408 TTF2Q9UNY4 1162 aaKnown RBP26.04■■□□□ 1.76
TSPAN4-206ENST00000397408 ARID4AP29374 1257 aaPredicted RBP26.03■■□□□ 1.76
TSPAN4-206ENST00000397408 CNTROBQ8N137 903 aa26.03■■□□□ 1.76
TSPAN4-206ENST00000397408 CLASRPQ8N2M8 674 aaKnown RBP26.03■■□□□ 1.76
TSPAN4-206ENST00000397408 BCL11AQ9H165 835 aa26.03■■□□□ 1.76
TSPAN4-206ENST00000397408 TTC39AQ5SRH9 613 aa26.02■■□□□ 1.76
TSPAN4-206ENST00000397408 DCTPP1Q9H773 170 aa26.02■■□□□ 1.76
TSPAN4-206ENST00000397408 GGA3Q9NZ52 723 aa26.02■■□□□ 1.76
TSPAN4-206ENST00000397408 PGAP2Q9UHJ9 254 aa26.02■■□□□ 1.76
TSPAN4-206ENST00000397408 ASTN2O75129 1339 aaPredicted RBP26.02■■□□□ 1.76
TSPAN4-206ENST00000397408 UQCRFS1P1P0C7P4 283 aa26.01■■□□□ 1.75
TSPAN4-206ENST00000397408 SCARF1Q14162 830 aa26.01■■□□□ 1.75
TSPAN4-206ENST00000397408 PDS5AQ29RF7 1337 aaKnown RBP26.01■■□□□ 1.75
TSPAN4-206ENST00000397408 CCDC158Q5M9N0 1113 aa26.01■■□□□ 1.75
TSPAN4-206ENST00000397408 NBPF9Q3BBW0 867 aa26■■□□□ 1.75
TSPAN4-206ENST00000397408 LRRCC1Q9C099 1032 aa26■■□□□ 1.75
TSPAN4-206ENST00000397408 SUGT1Q9Y2Z0 365 aa26■■□□□ 1.75
TSPAN4-206ENST00000397408 SALL1Q9NSC2 1324 aa25.99■■□□□ 1.75
TSPAN4-206ENST00000397408 WNT10BO00744 389 aa25.99■■□□□ 1.75
TSPAN4-206ENST00000397408 ITGBL1O95965 494 aaPredicted RBP25.99■■□□□ 1.75
TSPAN4-206ENST00000397408 DLGAP5Q15398 846 aa25.99■■□□□ 1.75
TSPAN4-206ENST00000397408 CFAP100Q494V2 611 aa25.99■■□□□ 1.75
TSPAN4-206ENST00000397408 PI16Q6UXB8 463 aa25.99■■□□□ 1.75
TSPAN4-206ENST00000397408 HMG20BQ9P0W2 317 aa25.99■■□□□ 1.75
TSPAN4-206ENST00000397408 HSPA6P17066 643 aa25.98■■□□□ 1.75
TSPAN4-206ENST00000397408 MCAMP43121 646 aa25.98■■□□□ 1.75
TSPAN4-206ENST00000397408 ANGEL2Q5VTE6 544 aaKnown RBP25.98■■□□□ 1.75
TSPAN4-206ENST00000397408 SPATA5Q8NB90 893 aa25.98■■□□□ 1.75
TSPAN4-206ENST00000397408 GLIS2Q9BZE0 524 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-206ENST00000397408 PCDHAC2Q9Y5I4 1007 aa25.98■■□□□ 1.75
TSPAN4-206ENST00000397408 MAST3O60307 1309 aa25.98■■□□□ 1.75
TSPAN4-206ENST00000397408 PASKQ96RG2 1323 aa25.98■■□□□ 1.75
TSPAN4-206ENST00000397408 PRDX5P30044 214 aa25.97■■□□□ 1.75
TSPAN4-206ENST00000397408 RBM5P52756 815 aaKnown RBP eCLIP25.97■■□□□ 1.75
TSPAN4-206ENST00000397408 DCPSQ96C86 337 aaKnown RBP25.97■■□□□ 1.75
TSPAN4-206ENST00000397408 ZBED3Q96IU2 234 aaPredicted RBP25.97■■□□□ 1.75
TSPAN4-206ENST00000397408 SERPINA10Q9UK55 444 aa25.97■■□□□ 1.75
TSPAN4-206ENST00000397408 SMARCA5O60264 1052 aaPredicted RBP25.97■■□□□ 1.75
TSPAN4-206ENST00000397408 IFIT2P09913 472 aaKnown RBP25.97■■□□□ 1.75
TSPAN4-206ENST00000397408 CRKP46108 304 aa25.97■■□□□ 1.75
TSPAN4-206ENST00000397408 ZGPATQ8N5A5 531 aaKnown RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms