RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LMBR1LQ6UX01 489 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 CSRNP1Q96S65 589 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 SEC31BQ9NQW1 1179 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 TRPA1O75762 1119 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 ZNF280AP59817 542 aaPredicted RBP16.34■□□□□ 0.21
SEC13-209ENST00000397117 FOXO4P98177 505 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 NUCB1Q02818 461 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 SULF1Q8IWU6 871 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 PLA2G12BQ9BX93 195 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 GGA3Q9NZ52 723 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 ZNF609O15014 1411 aa16.33■□□□□ 0.2
SEC13-209ENST00000397117 APBB1O00213 710 aa16.33■□□□□ 0.2
SEC13-209ENST00000397117 SURF6O75683 361 aaKnown RBP16.33■□□□□ 0.2
SEC13-209ENST00000397117 HSP90AB4PQ58FF6 505 aa16.33■□□□□ 0.2
SEC13-209ENST00000397117 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.2
SEC13-209ENST00000397117 CDCA5Q96FF9 252 aa16.33■□□□□ 0.2
SEC13-209ENST00000397117 EXOC6BQ9Y2D4 811 aa16.33■□□□□ 0.2
SEC13-209ENST00000397117 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
SEC13-209ENST00000397117 AGBL3Q8NEM8 1001 aa16.32■□□□□ 0.2
SEC13-209ENST00000397117 GMLQ99445 158 aa16.32■□□□□ 0.2
SEC13-209ENST00000397117 PDE8AO60658 829 aa16.31■□□□□ 0.2
SEC13-209ENST00000397117 RAB11FIP3O75154 756 aa16.31■□□□□ 0.2
SEC13-209ENST00000397117 UFL1O94874 794 aa16.31■□□□□ 0.2
SEC13-209ENST00000397117 RGS3P49796 1198 aa16.31■□□□□ 0.2
SEC13-209ENST00000397117 SCARF1Q14162 830 aa16.31■□□□□ 0.2
SEC13-209ENST00000397117 RSBN1LQ6PCB5 846 aaPredicted RBP16.31■□□□□ 0.2
SEC13-209ENST00000397117 GGA1Q9UJY5 639 aa16.31■□□□□ 0.2
SEC13-209ENST00000397117 CTSWP56202 376 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 SKAP1Q86WV1 359 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 REM2Q8IYK8 340 aaPredicted RBP16.3■□□□□ 0.2
SEC13-209ENST00000397117 LNPKQ9C0E8 428 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 ANKIB1Q9P2G1 1089 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 G3V3G9 751 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 G3BP1Q13283 466 aaKnown RBP eCLIP16.3■□□□□ 0.22e-9■■■□□ 17.5
SEC13-209ENST00000397117 CCDC57Q2TAC2 916 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 ANGEL2Q5VTE6 544 aaKnown RBP16.3■□□□□ 0.2
SEC13-209ENST00000397117 RASAL3Q86YV0 1011 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 LRRCC1Q9C099 1032 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 BCL11AQ9H165 835 aa16.3■□□□□ 0.2
SEC13-209ENST00000397117 NOP58Q9Y2X3 529 aaKnown RBP16.3■□□□□ 0.2
SEC13-209ENST00000397117 CSF1RP07333 972 aa16.29■□□□□ 0.2
SEC13-209ENST00000397117 FKBP1BP68106 108 aa16.29■□□□□ 0.2
SEC13-209ENST00000397117 CCDC152Q4G0S7 254 aa16.29■□□□□ 0.2
SEC13-209ENST00000397117 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
SEC13-209ENST00000397117 PA2G4Q9UQ80 394 aaKnown RBP16.29■□□□□ 0.2
SEC13-209ENST00000397117 PAPPA2Q9BXP8 1791 aa16.28■□□□□ 0.2
SEC13-209ENST00000397117 IFIT5Q13325 482 aaKnown RBP16.28■□□□□ 0.2
SEC13-209ENST00000397117 COPRSQ9NQ92 184 aa16.28■□□□□ 0.2
SEC13-209ENST00000397117 PITPNM2Q9BZ72 1349 aa16.28■□□□□ 0.2
SEC13-209ENST00000397117 USP17L8P0C7I0 530 aa16.27■□□□□ 0.2
SEC13-209ENST00000397117 RFX5P48382 616 aaPredicted RBP16.27■□□□□ 0.2
SEC13-209ENST00000397117 SOX10P56693 466 aa16.27■□□□□ 0.2
SEC13-209ENST00000397117 TAF7LQ5H9L4 462 aa16.27■□□□□ 0.2
SEC13-209ENST00000397117 CTU1Q7Z7A3 348 aaKnown RBP16.27■□□□□ 0.2
SEC13-209ENST00000397117 TTLL11Q8NHH1 800 aa16.27■□□□□ 0.2
SEC13-209ENST00000397117 KIF1BPQ96EK5 621 aa16.27■□□□□ 0.2
SEC13-209ENST00000397117 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.2
SEC13-209ENST00000397117 SIL1Q9H173 461 aa16.27■□□□□ 0.2
SEC13-209ENST00000397117 MYOZ2Q9NPC6 264 aa16.27■□□□□ 0.2
SEC13-209ENST00000397117 PCDH10Q9P2E7 1040 aa16.27■□□□□ 0.2
SEC13-209ENST00000397117 XDHP47989 1333 aa16.27■□□□□ 0.2
SEC13-209ENST00000397117 USP17L3A6NCW0 530 aa16.27■□□□□ 0.19
SEC13-209ENST00000397117 USP17L4A6NCW7 530 aa16.27■□□□□ 0.19
SEC13-209ENST00000397117 SMARCA5O60264 1052 aaPredicted RBP16.27■□□□□ 0.19
SEC13-209ENST00000397117 PTPN12Q05209 780 aaKnown RBP16.27■□□□□ 0.19
SEC13-209ENST00000397117 USP17L1Q7RTZ2 530 aa16.27■□□□□ 0.19
SEC13-209ENST00000397117 PODNQ7Z5L7 613 aa16.27■□□□□ 0.19
SEC13-209ENST00000397117 KLHDC4Q8TBB5 520 aa16.27■□□□□ 0.19
SEC13-209ENST00000397117 ZNF646O15015 1829 aaPredicted RBP16.26■□□□□ 0.19
SEC13-209ENST00000397117 ANKRD18BA2A2Z9 1011 aa16.26■□□□□ 0.19
SEC13-209ENST00000397117 ATP2B4P23634 1241 aa16.26■□□□□ 0.19
SEC13-209ENST00000397117 RHPN1Q8TCX5 695 aa16.26■□□□□ 0.19
SEC13-209ENST00000397117 GREM2Q9H772 168 aa16.26■□□□□ 0.19
SEC13-209ENST00000397117 WTIPA6NIX2 430 aaPredicted RBP16.25■□□□□ 0.19
SEC13-209ENST00000397117 ITGA6P23229 1130 aa16.25■□□□□ 0.19
SEC13-209ENST00000397117 PDE4AP27815 886 aa16.25■□□□□ 0.19
SEC13-209ENST00000397117 MOB2Q70IA6 237 aa16.25■□□□□ 0.19
SEC13-209ENST00000397117 ANKRD18AQ8IVF6 992 aa16.25■□□□□ 0.19
SEC13-209ENST00000397117 UBE2Q2LH0YL09 131 aa16.24■□□□□ 0.19
SEC13-209ENST00000397117 MYH3P11055 1940 aa16.24■□□□□ 0.19
SEC13-209ENST00000397117 ZNF594Q96JF6 807 aaPredicted RBP16.23■□□□□ 0.19
SEC13-209ENST00000397117 SCAF8Q9UPN6 1271 aaKnown RBP16.23■□□□□ 0.19
SEC13-209ENST00000397117 SPEF2Q9C093 1822 aa16.23■□□□□ 0.19
SEC13-209ENST00000397117 NBPF9Q3BBW0 867 aa16.23■□□□□ 0.19
SEC13-209ENST00000397117 PRAMEF18Q5VWM3 479 aa16.23■□□□□ 0.19
SEC13-209ENST00000397117 IL1RAPL2Q9NP60 686 aa16.23■□□□□ 0.19
SEC13-209ENST00000397117 HPS5Q9UPZ3 1129 aa16.23■□□□□ 0.19
SEC13-209ENST00000397117 EYA2O00167 538 aa16.22■□□□□ 0.19
SEC13-209ENST00000397117 CIAO1O76071 339 aa16.22■□□□□ 0.19
SEC13-209ENST00000397117 IL15P40933 162 aaPredicted RBP16.22■□□□□ 0.19
SEC13-209ENST00000397117 TM4SF4P48230 202 aa16.22■□□□□ 0.19
SEC13-209ENST00000397117 PKN2Q16513 984 aaKnown RBP16.22■□□□□ 0.19
SEC13-209ENST00000397117 DACT2Q5SW24 774 aa16.22■□□□□ 0.19
SEC13-209ENST00000397117 CLASRPQ8N2M8 674 aaKnown RBP16.22■□□□□ 0.19
SEC13-209ENST00000397117 BSDC1Q9NW68 430 aaPredicted RBP16.22■□□□□ 0.19
SEC13-209ENST00000397117 FBXO3Q9UK99 471 aa16.22■□□□□ 0.19
SEC13-209ENST00000397117 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
SEC13-209ENST00000397117 MED23Q9ULK4 1368 aa16.22■□□□□ 0.19
SEC13-209ENST00000397117 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms