RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 SLC4A10Q6U841 1118 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 HHIPL2Q6UWX4 724 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 DCPSQ96C86 337 aaKnown RBP8.23□□□□□ -1.09
LMO3-205ENST00000396205 LOC285556D6RIA3 1793 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 PHIPQ8WWQ0 1821 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 GNAI2P04899 355 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 MAP2K1Q02750 393 aaPredicted RBP8.23□□□□□ -1.09
LMO3-205ENST00000396205 DOK7Q18PE1 504 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 TTLL5Q6EMB2 1281 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 FAM163AQ96GL9 167 aaPredicted RBP8.23□□□□□ -1.09
LMO3-205ENST00000396205 AKAP2Q9Y2D5 859 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 SALL2Q9Y467 1007 aaPredicted RBP8.23□□□□□ -1.09
LMO3-205ENST00000396205 RIMBP2O15034 1052 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 SLC5A1P13866 664 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 KCNJ4P48050 445 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 CAVIN4Q5BKX8 364 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 TAF7LQ5H9L4 462 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 OGFOD1Q8N543 542 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 WBP1LQ9NX94 342 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 MYH7P12883 1935 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 SPDYE2BA6NHP3 402 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 FAM155AB1AL88 458 aaPredicted RBP8.22□□□□□ -1.09
LMO3-205ENST00000396205 WNT10BO00744 389 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 ZBTB7BO15156 539 aaPredicted RBP8.22□□□□□ -1.09
LMO3-205ENST00000396205 IFIT1P09914 478 aaKnown RBP8.22□□□□□ -1.09
LMO3-205ENST00000396205 SPDYE6P0CI01 402 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 PDE3AQ14432 1141 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
LMO3-205ENST00000396205 ZGPATQ8N5A5 531 aaKnown RBP8.22□□□□□ -1.09
LMO3-205ENST00000396205 CERS5Q8N5B7 392 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 WDR66Q8TBY9 1149 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 JARID2Q92833 1246 aaPredicted RBP8.22□□□□□ -1.09
LMO3-205ENST00000396205 CCDC102AQ96A19 550 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 ZDHHC15Q96MV8 337 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 KCNQ5Q9NR82 932 aa8.22□□□□□ -1.09
LMO3-205ENST00000396205 KLRK1P26718 216 aa8.21□□□□□ -1.09
LMO3-205ENST00000396205 ARID4AP29374 1257 aaPredicted RBP8.21□□□□□ -1.09
LMO3-205ENST00000396205 SCARF1Q14162 830 aa8.21□□□□□ -1.09
LMO3-205ENST00000396205 DEFB115Q30KQ5 88 aa8.21□□□□□ -1.09
LMO3-205ENST00000396205 SPDYE2Q495Y8 402 aa8.21□□□□□ -1.09
LMO3-205ENST00000396205 MAP1SQ66K74 1059 aaPredicted RBP8.21□□□□□ -1.09
LMO3-205ENST00000396205 FAM83AQ86UY5 434 aa8.21□□□□□ -1.09
LMO3-205ENST00000396205 BCL11AQ9H165 835 aa8.21□□□□□ -1.09
LMO3-205ENST00000396205 WDR33Q9C0J8 1336 aaKnown RBP8.21□□□□□ -1.09
LMO3-205ENST00000396205 G3V3G9 751 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 SLC10A3P09131 477 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 HNRNPUQ00839 825 aaKnown RBP eCLIP8.21□□□□□ -1.1
LMO3-205ENST00000396205 AAMPQ13685 434 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 DCAF8Q5TAQ9 597 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 GAKO14976 1311 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 SIPA1L1O43166 1804 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 ATP8B2P98198 1209 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 TNFAIP1Q13829 316 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 DZIP1LQ8IYY4 767 aaKnown RBP8.21□□□□□ -1.1
LMO3-205ENST00000396205 HOOK2Q96ED9 719 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 MEIS3Q99687 375 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 ZBTB12Q9Y330 459 aaPredicted RBP8.21□□□□□ -1.1
LMO3-205ENST00000396205 ATAD5Q96QE3 1844 aa8.21□□□□□ -1.1
LMO3-205ENST00000396205 LRRC24Q50LG9 513 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 METTL24Q5JXM2 366 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 LDLRAD1Q5T700 205 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 SULF1Q8IWU6 871 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.2□□□□□ -1.1
LMO3-205ENST00000396205 CDCA5Q96FF9 252 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 PUS3Q9BZE2 481 aaKnown RBP8.2□□□□□ -1.1
LMO3-205ENST00000396205 GGA3Q9NZ52 723 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 DENND2AQ9ULE3 1009 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 LRRFIP2Q9Y608 721 aaKnown RBP8.2□□□□□ -1.1
LMO3-205ENST00000396205 NOGQ13253 232 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 KRT26Q7Z3Y9 468 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 CERS3Q8IU89 383 aa8.2□□□□□ -1.1
LMO3-205ENST00000396205 ZNF594Q96JF6 807 aaPredicted RBP8.2□□□□□ -1.1
LMO3-205ENST00000396205 ZCCHC17Q9NP64 241 aaKnown RBP8.2□□□□□ -1.1
LMO3-205ENST00000396205 GPR101Q96P66 508 aaPredicted RBP8.2□□□□□ -1.1
LMO3-205ENST00000396205 GBA2Q9HCG7 927 aaPredicted RBP8.2□□□□□ -1.1
LMO3-205ENST00000396205 VEGFBP49765 207 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 MAP3K10Q02779 954 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 MVPQ14764 893 aaKnown RBP8.19□□□□□ -1.1
LMO3-205ENST00000396205 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 GNL3LQ9NVN8 582 aaKnown RBP8.19□□□□□ -1.1
LMO3-205ENST00000396205 CLEC11AQ9Y240 323 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 PTPRFP10586 1907 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 ATRNL1Q5VV63 1379 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 TESPA1A2RU30 521 aaPredicted RBP8.19□□□□□ -1.1
LMO3-205ENST00000396205 EGFRP00533 1210 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 ZBTB48P10074 688 aaPredicted RBP8.19□□□□□ -1.1
LMO3-205ENST00000396205 TMEM57Q8N5G2 664 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 C2orf69Q8N8R5 385 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 CCDC85AQ96PX6 553 aaPredicted RBP8.19□□□□□ -1.1
LMO3-205ENST00000396205 DDX19BQ9UMR2 479 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 SHTN1A0MZ66 631 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 MYO1BO43795 1136 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 TAF5LO75529 589 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 BCAR3O75815 825 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 GTF2IP78347 998 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 RGMBQ6NW40 437 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 TICAM2Q86XR7 235 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 ERC1Q8IUD2 1116 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 RPAP2Q8IXW5 612 aaPredicted RBP8.19□□□□□ -1.1
LMO3-205ENST00000396205 GLIS2Q9BZE0 524 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms