RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 CTAGE8P0CG41 777 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 VSNL1P62760 191 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 CTAGE6Q86UF2 777 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 CTAGE4Q8IX94 777 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 EZH1Q92800 747 aaPredicted RBP9.7□□□□□ -0.86
DHFR2-202ENST00000394221 VIPAS39Q9H9C1 493 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 BIN2Q9UBW5 565 aaPredicted RBP9.7□□□□□ -0.86
DHFR2-202ENST00000394221 ZNF232Q9UNY5 417 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 ATXN2Q99700 1313 aaKnown RBP9.7□□□□□ -0.86
DHFR2-202ENST00000394221 MSH6P52701 1360 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 BUB1BO60566 1050 aaPredicted RBP9.7□□□□□ -0.86
DHFR2-202ENST00000394221 MCM3P25205 808 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
DHFR2-202ENST00000394221 THEMIS2Q5TEJ8 643 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 NUTM2GQ5VZR2 741 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 SPATA21Q7Z572 469 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 SH2B1Q9NRF2 756 aaPredicted RBP9.7□□□□□ -0.86
DHFR2-202ENST00000394221 MED14O60244 1454 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 LRRIQ1Q96JM4 1722 aa9.7□□□□□ -0.86
DHFR2-202ENST00000394221 FAM135BQ49AJ0 1406 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 VWA3AA6NCI4 1184 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 LRRIQ3A6PVS8 624 aaPredicted RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 CBFA2T2O43439 604 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 RTN3O95197 1032 aaPredicted RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 TMPOP42166 694 aaKnown RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 PDE1AP54750 535 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 PLCB4Q15147 1175 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 LRRC23Q53EV4 343 aaPredicted RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 RINLQ6ZS11 566 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 RPAP2Q8IXW5 612 aaPredicted RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 ACRBPQ8NEB7 543 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 HOOK2Q96ED9 719 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 VCPKMTQ9H867 229 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 ITSN2Q9NZM3 1697 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 SSH2Q76I76 1423 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 SHOX2O60902 331 aaPredicted RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 DTNBO60941 627 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 PDHBP11177 359 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 IMPDH2P12268 514 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 TPP2P29144 1249 aaPredicted RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 KARSQ15046 597 aaKnown RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 CDCA2Q69YH5 1023 aaPredicted RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 HOOK1Q9UJC3 728 aaKnown RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 RIPOR2Q9Y4F9 1068 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 EIF2AK4Q9P2K8 1649 aaKnown RBP9.69□□□□□ -0.86
DHFR2-202ENST00000394221 NUP160Q12769 1436 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 A6NNZ2 444 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 HSPA4P34932 840 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 TUBB8Q3ZCM7 444 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 HSP90AB2PQ58FF8 381 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 CCDC121Q6ZUS5 278 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 RUFY3Q7L099 469 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 PDILTQ8N807 584 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 MAB21L3Q8N8X9 362 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 SMARCC2Q8TAQ2 1214 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 LAMC1P11047 1609 aa9.69□□□□□ -0.86
DHFR2-202ENST00000394221 AHCYL1O43865 530 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 TOP1P11387 765 aaKnown RBP9.68□□□□□ -0.86
DHFR2-202ENST00000394221 SF3B2Q13435 895 aaKnown RBP9.68□□□□□ -0.86
DHFR2-202ENST00000394221 GGT6Q6P531 493 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 MFN1Q8IWA4 741 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 ANKRD44Q8N8A2 993 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 XAGE2Q96GT9 111 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 SPAG5Q96R06 1193 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 RGL1Q9NZL6 768 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 CDC23Q9UJX2 597 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 TTC21AQ8NDW8 1320 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 KIF5CO60282 957 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 AARSP49588 968 aaKnown RBP eCLIP9.68□□□□□ -0.86
DHFR2-202ENST00000394221 IFFO1Q0D2I5 559 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 TUBB2AQ13885 445 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 RRP12Q5JTH9 1297 aaKnown RBP9.68□□□□□ -0.86
DHFR2-202ENST00000394221 CCDC148Q8NFR7 591 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 TRIM58Q8NG06 486 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 CCDC47Q96A33 483 aaKnown RBP9.68□□□□□ -0.86
DHFR2-202ENST00000394221 SDF4Q9BRK5 362 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 TUBB2BQ9BVA1 445 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 TPD52L2O43399 206 aaKnown RBP9.68□□□□□ -0.86
DHFR2-202ENST00000394221 SERPINC1P01008 464 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 IFIT2P09913 472 aaKnown RBP9.68□□□□□ -0.86
DHFR2-202ENST00000394221 PYGBP11216 843 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 CHMLP26374 656 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 CDC37L1Q7L3B6 337 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 NCAPG2Q86XI2 1143 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 LMCD1Q9NZU5 365 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 TBC1D2BQ9UPU7 963 aa9.68□□□□□ -0.86
DHFR2-202ENST00000394221 YTHDC2Q9H6S0 1430 aaKnown RBP9.68□□□□□ -0.86
DHFR2-202ENST00000394221 CCDC13Q8IYE1 715 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 OR8K1Q8NGG5 319 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 RUFY1Q96T51 708 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 TSGA10Q9BZW7 698 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 TRIM4Q9C037 500 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 MYOM2P54296 1465 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 ABCC10Q5T3U5 1492 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 SYF2O95926 243 aaKnown RBP9.67□□□□□ -0.86
DHFR2-202ENST00000394221 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 CFAP100Q494V2 611 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 EFCAB2Q5VUJ9 269 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 TLDC1Q6P9B6 456 aa9.67□□□□□ -0.86
DHFR2-202ENST00000394221 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms