RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 PSMD14O00487 310 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 ANP32AP39687 249 aaKnown RBP16.51■□□□□ 0.23
PTN-202ENST00000393083 GYG1P46976 350 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 TNIP1Q15025 636 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 FBXO33Q7Z6M2 555 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 ARAP2Q8WZ64 1704 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 CCDC8Q9H0W5 538 aaPredicted RBP16.51■□□□□ 0.23
PTN-202ENST00000393083 RRAGCQ9HB90 399 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
PTN-202ENST00000393083 ERC2O15083 957 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 VIL1P09327 827 aaKnown RBP16.51■□□□□ 0.23
PTN-202ENST00000393083 IFIT1P09914 478 aaKnown RBP16.51■□□□□ 0.23
PTN-202ENST00000393083 IL1R1P14778 569 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
PTN-202ENST00000393083 ATP2B3Q16720 1220 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 ZNF804AQ7Z570 1209 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
PTN-202ENST00000393083 TRIM6-TRIM34B2RNG4 842 aa16.5■□□□□ 0.23
PTN-202ENST00000393083 KIF3CO14782 793 aa16.5■□□□□ 0.23
PTN-202ENST00000393083 GLRX3O76003 335 aaKnown RBP16.5■□□□□ 0.23
PTN-202ENST00000393083 SLC5A1P13866 664 aa16.5■□□□□ 0.23
PTN-202ENST00000393083 HIBADHP31937 336 aaKnown RBP16.5■□□□□ 0.23
PTN-202ENST00000393083 SCNN1DP51172 638 aa16.5■□□□□ 0.23
PTN-202ENST00000393083 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
PTN-202ENST00000393083 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
PTN-202ENST00000393083 VEGFAP15692 232 aaPredicted RBP16.49■□□□□ 0.23
PTN-202ENST00000393083 BCAMP50895 628 aa16.49■□□□□ 0.23
PTN-202ENST00000393083 CASC1Q6TDU7 716 aa16.49■□□□□ 0.23
PTN-202ENST00000393083 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
PTN-202ENST00000393083 TDRD7Q8NHU6 1098 aaKnown RBP16.49■□□□□ 0.23
PTN-202ENST00000393083 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
PTN-202ENST00000393083 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
PTN-202ENST00000393083 GMPSP49915 693 aaPredicted RBP16.48■□□□□ 0.23
PTN-202ENST00000393083 TIMM10P62072 90 aa16.48■□□□□ 0.23
PTN-202ENST00000393083 STRIP1Q5VSL9 837 aa16.48■□□□□ 0.23
PTN-202ENST00000393083 AKAP2Q9Y2D5 859 aa16.48■□□□□ 0.23
PTN-202ENST00000393083 ZBTB12Q9Y330 459 aaPredicted RBP16.48■□□□□ 0.23
PTN-202ENST00000393083 A0A1B0GUL7 405 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 ADORA1P30542 326 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 DACT2Q5SW24 774 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 GMLQ99445 158 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 GPRC5DQ9NZD1 345 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 DBNLQ9UJU6 430 aaKnown RBP16.47■□□□□ 0.23
PTN-202ENST00000393083 PSME4Q14997 1843 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 MAP4K4O95819 1239 aaPredicted RBP16.47■□□□□ 0.23
PTN-202ENST00000393083 GTF2IP78347 998 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 TTLL5Q6EMB2 1281 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
PTN-202ENST00000393083 CNTROBQ8N137 903 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 DPF2Q92785 391 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 HACL1Q9UJ83 578 aa16.47■□□□□ 0.23
PTN-202ENST00000393083 ZNF646O15015 1829 aaPredicted RBP16.46■□□□□ 0.23
PTN-202ENST00000393083 IQCA1LA6NCM1 817 aa16.46■□□□□ 0.23
PTN-202ENST00000393083 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
PTN-202ENST00000393083 RPS12P25398 132 aaKnown RBP16.46■□□□□ 0.23
PTN-202ENST00000393083 EPS15P42566 896 aa16.46■□□□□ 0.23
PTN-202ENST00000393083 DBNDD2Q9BQY9 259 aa16.46■□□□□ 0.23
PTN-202ENST00000393083 MXD3Q9BW11 206 aa16.46■□□□□ 0.23
PTN-202ENST00000393083 TAF1DQ9H5J8 278 aaPredicted RBP16.46■□□□□ 0.23
PTN-202ENST00000393083 SCN4AP35499 1836 aa16.45■□□□□ 0.22
PTN-202ENST00000393083 FAM205AQ6ZU69 1335 aa16.45■□□□□ 0.22
PTN-202ENST00000393083 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
PTN-202ENST00000393083 VPS37DQ86XT2 251 aa16.45■□□□□ 0.22
PTN-202ENST00000393083 AGBL3Q8NEM8 1001 aa16.45■□□□□ 0.22
PTN-202ENST00000393083 XAGE2Q96GT9 111 aa16.45■□□□□ 0.22
PTN-202ENST00000393083 TBC1D32Q96NH3 1257 aa16.45■□□□□ 0.22
PTN-202ENST00000393083 ZBTB22O15209 634 aa16.44■□□□□ 0.22
PTN-202ENST00000393083 EPHX2P34913 555 aa16.44■□□□□ 0.22
PTN-202ENST00000393083 PHKA1P46020 1223 aa16.44■□□□□ 0.22
PTN-202ENST00000393083 CCDC102BQ68D86 513 aa16.44■□□□□ 0.22
PTN-202ENST00000393083 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
PTN-202ENST00000393083 CNOT7Q9UIV1 285 aaKnown RBP16.44■□□□□ 0.22
PTN-202ENST00000393083 IQSEC3Q9UPP2 1182 aaPredicted RBP16.44■□□□□ 0.22
PTN-202ENST00000393083 MYH7P12883 1935 aa16.43■□□□□ 0.22
PTN-202ENST00000393083 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
PTN-202ENST00000393083 MICALL2Q8IY33 904 aa16.43■□□□□ 0.22
PTN-202ENST00000393083 CERS5Q8N5B7 392 aa16.43■□□□□ 0.22
PTN-202ENST00000393083 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
PTN-202ENST00000393083 JAG2Q9Y219 1238 aa16.43■□□□□ 0.22
PTN-202ENST00000393083 ATP5JP18859 108 aa16.43■□□□□ 0.22
PTN-202ENST00000393083 FKBP1AP62942 108 aaKnown RBP16.43■□□□□ 0.22
PTN-202ENST00000393083 C22orf23Q9BZE7 217 aa16.43■□□□□ 0.22
PTN-202ENST00000393083 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
PTN-202ENST00000393083 MYO3BQ8WXR4 1341 aa16.42■□□□□ 0.22
PTN-202ENST00000393083 CHMLP26374 656 aa16.42■□□□□ 0.22
PTN-202ENST00000393083 ZNF280AP59817 542 aaPredicted RBP16.42■□□□□ 0.22
PTN-202ENST00000393083 EVI5LQ96CN4 794 aa16.42■□□□□ 0.22
PTN-202ENST00000393083 AKAP11Q9UKA4 1901 aa16.41■□□□□ 0.22
PTN-202ENST00000393083 COL1A1P02452 1464 aaPredicted RBP16.41■□□□□ 0.22
PTN-202ENST00000393083 H7C1D1 291 aa16.41■□□□□ 0.22
PTN-202ENST00000393083 POTEIP0CG38 1075 aa16.41■□□□□ 0.22
PTN-202ENST00000393083 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
PTN-202ENST00000393083 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
PTN-202ENST00000393083 GNL3LQ9NVN8 582 aaKnown RBP16.41■□□□□ 0.22
PTN-202ENST00000393083 SEMA3EO15041 775 aa16.4■□□□□ 0.22
PTN-202ENST00000393083 FRAT2O75474 233 aaPredicted RBP16.4■□□□□ 0.22
PTN-202ENST00000393083 TOMM70O94826 608 aa16.4■□□□□ 0.22
PTN-202ENST00000393083 USP17L8P0C7I0 530 aa16.4■□□□□ 0.22
PTN-202ENST00000393083 HIRAP54198 1017 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms