RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 GNAI2P04899 355 aa14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 VEGFBP49765 207 aa14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 PUM3Q15397 648 aaKnown RBP14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 DEFB115Q30KQ5 88 aa14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 NBPF9Q3BBW0 867 aa14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 KIAA0825Q8IV33 1275 aa14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 DZIP1LQ8IYY4 767 aaKnown RBP14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 OGFOD1Q8N543 542 aa14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 FBXW7Q969H0 707 aa14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 PA2G4Q9UQ80 394 aaKnown RBP14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 THSD7BQ9C0I4 1608 aa14.2□□□□□ -0.14
IGHV4-28-201ENST00000390612 ADM5C9JUS6 153 aa14.2□□□□□ -0.14
IGHV4-28-201ENST00000390612 ZBTB7BO15156 539 aaPredicted RBP14.2□□□□□ -0.14
IGHV4-28-201ENST00000390612 CELF2O95319 508 aaKnown RBP14.2□□□□□ -0.14
IGHV4-28-201ENST00000390612 IL15P40933 162 aaPredicted RBP14.2□□□□□ -0.14
IGHV4-28-201ENST00000390612 ANGEL2Q5VTE6 544 aaKnown RBP14.2□□□□□ -0.14
IGHV4-28-201ENST00000390612 SAPCD2Q86UD0 394 aa14.2□□□□□ -0.14
IGHV4-28-201ENST00000390612 LPIN2Q92539 896 aa14.2□□□□□ -0.14
IGHV4-28-201ENST00000390612 HHIPL1Q96JK4 782 aa14.2□□□□□ -0.14
IGHV4-28-201ENST00000390612 SRGAP3O43295 1099 aa14.19□□□□□ -0.14
IGHV4-28-201ENST00000390612 IFIT1P09914 478 aaKnown RBP14.19□□□□□ -0.14
IGHV4-28-201ENST00000390612 BCAMP50895 628 aa14.19□□□□□ -0.14
IGHV4-28-201ENST00000390612 SIL1Q9H173 461 aa14.19□□□□□ -0.14
IGHV4-28-201ENST00000390612 CEP126Q9P2H0 1117 aa14.19□□□□□ -0.14
IGHV4-28-201ENST00000390612 HDAC9Q9UKV0 1011 aa14.19□□□□□ -0.14
IGHV4-28-201ENST00000390612 PNMA6EA0A0J9YXQ4 647 aa14.18□□□□□ -0.14
IGHV4-28-201ENST00000390612 CAVIN4Q5BKX8 364 aa14.18□□□□□ -0.14
IGHV4-28-201ENST00000390612 SULF1Q8IWU6 871 aa14.18□□□□□ -0.14
IGHV4-28-201ENST00000390612 ABT1Q9ULW3 272 aaKnown RBP14.18□□□□□ -0.14
IGHV4-28-201ENST00000390612 JAG2Q9Y219 1238 aa14.18□□□□□ -0.14
IGHV4-28-201ENST00000390612 SLC5A1P13866 664 aa14.17□□□□□ -0.14
IGHV4-28-201ENST00000390612 POLA2Q14181 598 aa14.17□□□□□ -0.14
IGHV4-28-201ENST00000390612 ATP2B3Q16720 1220 aa14.17□□□□□ -0.14
IGHV4-28-201ENST00000390612 MFSD14BQ5SR56 506 aa14.17□□□□□ -0.14
IGHV4-28-201ENST00000390612 SSH3Q8TE77 659 aa14.17□□□□□ -0.14
IGHV4-28-201ENST00000390612 CDCA5Q96FF9 252 aa14.17□□□□□ -0.14
IGHV4-28-201ENST00000390612 PCDHAC2Q9Y5I4 1007 aa14.17□□□□□ -0.14
IGHV4-28-201ENST00000390612 WDR33Q9C0J8 1336 aaKnown RBP14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 ATP8B2P98198 1209 aa14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 DLGAP5Q15398 846 aa14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 GRIK5Q16478 980 aa14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 VPS37DQ86XT2 251 aa14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 FTSJ3Q8IY81 847 aaKnown RBP14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 PANK1Q8TE04 598 aa14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 PRMT6Q96LA8 375 aaPredicted RBP14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 RCAN3Q9UKA8 241 aa14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 IQSEC3Q9UPP2 1182 aaPredicted RBP14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.16□□□□□ -0.14
IGHV4-28-201ENST00000390612 AOX1Q06278 1338 aa14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 PAPPA2Q9BXP8 1791 aa14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 COL1A1P02452 1464 aaPredicted RBP14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 HDLBPQ00341 1268 aaKnown RBP14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 CFAP100Q494V2 611 aa14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 TBC1D22AQ8WUA7 517 aa14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 CAPNS2Q96L46 248 aa14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 MRIQ9BWK5 157 aa14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 ZNF408Q9H9D4 720 aa14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 GBA2Q9HCG7 927 aaPredicted RBP14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 SERPINA10Q9UK55 444 aa14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 SUGT1Q9Y2Z0 365 aa14.15□□□□□ -0.14
IGHV4-28-201ENST00000390612 F8W031 263 aaPredicted RBP14.14□□□□□ -0.15
IGHV4-28-201ENST00000390612 ECE1P42892 770 aa14.14□□□□□ -0.15
IGHV4-28-201ENST00000390612 TIMM10P62072 90 aa14.14□□□□□ -0.15
IGHV4-28-201ENST00000390612 CYP4F22Q6NT55 531 aa14.14□□□□□ -0.15
IGHV4-28-201ENST00000390612 ITPRIPQ8IWB1 547 aa14.14□□□□□ -0.15
IGHV4-28-201ENST00000390612 TTF2Q9UNY4 1162 aaKnown RBP14.14□□□□□ -0.15
IGHV4-28-201ENST00000390612 SCAF8Q9UPN6 1271 aaKnown RBP14.14□□□□□ -0.15
IGHV4-28-201ENST00000390612 AKAP11Q9UKA4 1901 aa14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 MYH2Q9UKX2 1941 aa14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 HSPA1AP0DMV8 641 aaKnown RBP14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 HSPA1BP0DMV9 641 aaKnown RBP14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 MS4A1P11836 297 aa14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 ADORA1P30542 326 aa14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 HUNKP57058 714 aa14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 FKBP1BP68106 108 aa14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 TFCP2Q12800 502 aa14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 CHAF1AQ13111 956 aaPredicted RBP14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 APOBEC3FQ8IUX4 373 aaKnown RBP14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 C2orf69Q8N8R5 385 aa14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 WBP1LQ9NX94 342 aa14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 NOP58Q9Y2X3 529 aaKnown RBP14.13□□□□□ -0.15
IGHV4-28-201ENST00000390612 SEMA3EO15041 775 aa14.12□□□□□ -0.15
IGHV4-28-201ENST00000390612 MAP2K2P36507 400 aa14.12□□□□□ -0.15
IGHV4-28-201ENST00000390612 PHKA1P46020 1223 aa14.12□□□□□ -0.15
IGHV4-28-201ENST00000390612 WDR66Q8TBY9 1149 aa14.12□□□□□ -0.15
IGHV4-28-201ENST00000390612 C1orf115Q9H7X2 142 aa14.12□□□□□ -0.15
IGHV4-28-201ENST00000390612 AKAP2Q9Y2D5 859 aa14.12□□□□□ -0.15
IGHV4-28-201ENST00000390612 A0A1B0GUL7 405 aa14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 FAM155AB1AL88 458 aaPredicted RBP14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 FRAT2O75474 233 aaPredicted RBP14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 CRKP46108 304 aa14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 MVPQ14764 893 aaKnown RBP14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 PRAMEF18Q5VWM3 479 aa14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 CCDC102BQ68D86 513 aa14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 XAGE2Q96GT9 111 aa14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 DEFB129Q9H1M3 183 aa14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 PDS5AQ29RF7 1337 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms