RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 KAZALD1Q96I82 304 aa13.53□□□□□ -0.24
TRAV4-201ENST00000390426 ZBED3Q96IU2 234 aaPredicted RBP13.53□□□□□ -0.24
TRAV4-201ENST00000390426 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
TRAV4-201ENST00000390426 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
TRAV4-201ENST00000390426 PCDHAC2Q9Y5I4 1007 aa13.53□□□□□ -0.24
TRAV4-201ENST00000390426 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
TRAV4-201ENST00000390426 NBPF7P0C2Y1 421 aaPredicted RBP13.52□□□□□ -0.25
TRAV4-201ENST00000390426 APOBEC3FQ8IUX4 373 aaKnown RBP13.52□□□□□ -0.25
TRAV4-201ENST00000390426 PAPPA2Q9BXP8 1791 aa13.52□□□□□ -0.25
TRAV4-201ENST00000390426 MKRN3Q13064 507 aaKnown RBP13.51□□□□□ -0.25
TRAV4-201ENST00000390426 MAPK8IP2Q13387 824 aaPredicted RBP13.51□□□□□ -0.25
TRAV4-201ENST00000390426 CFAP100Q494V2 611 aa13.51□□□□□ -0.25
TRAV4-201ENST00000390426 CLRN2A0PK11 232 aa13.5□□□□□ -0.25
TRAV4-201ENST00000390426 E9PSI1 815 aa13.5□□□□□ -0.25
TRAV4-201ENST00000390426 GYG1P46976 350 aa13.5□□□□□ -0.25
TRAV4-201ENST00000390426 FKBP1AP62942 108 aaKnown RBP13.5□□□□□ -0.25
TRAV4-201ENST00000390426 PTPN12Q05209 780 aaKnown RBP13.5□□□□□ -0.25
TRAV4-201ENST00000390426 UBE4AQ14139 1066 aa13.5□□□□□ -0.25
TRAV4-201ENST00000390426 ARMC9Q7Z3E5 817 aa13.5□□□□□ -0.25
TRAV4-201ENST00000390426 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
TRAV4-201ENST00000390426 MTMR14Q8NCE2 650 aa13.5□□□□□ -0.25
TRAV4-201ENST00000390426 SSH1Q8WYL5 1049 aa13.5□□□□□ -0.25
TRAV4-201ENST00000390426 BICC1Q9H694 974 aaKnown RBP13.5□□□□□ -0.25
TRAV4-201ENST00000390426 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.5□□□□□ -0.25
TRAV4-201ENST00000390426 FZD1Q9UP38 647 aa13.5□□□□□ -0.25
TRAV4-201ENST00000390426 UTYO14607 1347 aa13.49□□□□□ -0.25
TRAV4-201ENST00000390426 HIBADHP31937 336 aaKnown RBP13.49□□□□□ -0.25
TRAV4-201ENST00000390426 RBM5P52756 815 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAV4-201ENST00000390426 SLFN5Q08AF3 891 aa13.49□□□□□ -0.25
TRAV4-201ENST00000390426 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
TRAV4-201ENST00000390426 TDRD7Q8NHU6 1098 aaKnown RBP13.49□□□□□ -0.25
TRAV4-201ENST00000390426 FAM84BQ96KN1 310 aaPredicted RBP13.49□□□□□ -0.25
TRAV4-201ENST00000390426 PRMT6Q96LA8 375 aaPredicted RBP13.49□□□□□ -0.25
TRAV4-201ENST00000390426 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
TRAV4-201ENST00000390426 ANGEL1Q9UNK9 670 aaKnown RBP13.49□□□□□ -0.25
TRAV4-201ENST00000390426 RIPOR2Q9Y4F9 1068 aa13.49□□□□□ -0.25
TRAV4-201ENST00000390426 AOX1Q06278 1338 aa13.48□□□□□ -0.25
TRAV4-201ENST00000390426 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
TRAV4-201ENST00000390426 TBC1D8O95759 1140 aa13.48□□□□□ -0.25
TRAV4-201ENST00000390426 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
TRAV4-201ENST00000390426 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
TRAV4-201ENST00000390426 ANKRD44Q8N8A2 993 aa13.48□□□□□ -0.25
TRAV4-201ENST00000390426 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
TRAV4-201ENST00000390426 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
TRAV4-201ENST00000390426 PTPRCP08575 1304 aa13.47□□□□□ -0.25
TRAV4-201ENST00000390426 FAM205AQ6ZU69 1335 aa13.47□□□□□ -0.25
TRAV4-201ENST00000390426 MROH5Q6ZUA9 1318 aa13.47□□□□□ -0.25
TRAV4-201ENST00000390426 MYO1BO43795 1136 aa13.47□□□□□ -0.25
TRAV4-201ENST00000390426 RABL6Q3YEC7 729 aaPredicted RBP13.47□□□□□ -0.25
TRAV4-201ENST00000390426 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
TRAV4-201ENST00000390426 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
TRAV4-201ENST00000390426 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
TRAV4-201ENST00000390426 A0A1B0GUL6 1792 aa13.47□□□□□ -0.25
TRAV4-201ENST00000390426 TM4SF4P48230 202 aa13.46□□□□□ -0.25
TRAV4-201ENST00000390426 KLHDC4Q8TBB5 520 aa13.46□□□□□ -0.25
TRAV4-201ENST00000390426 SLC10A4Q96EP9 437 aa13.46□□□□□ -0.25
TRAV4-201ENST00000390426 USP44Q9H0E7 712 aa13.46□□□□□ -0.25
TRAV4-201ENST00000390426 TTF2Q9UNY4 1162 aaKnown RBP13.46□□□□□ -0.25
TRAV4-201ENST00000390426 IQSEC3Q9UPP2 1182 aaPredicted RBP13.46□□□□□ -0.25
TRAV4-201ENST00000390426 PPP2R3BQ9Y5P8 575 aa13.46□□□□□ -0.25
TRAV4-201ENST00000390426 AKAP11Q9UKA4 1901 aa13.45□□□□□ -0.26
TRAV4-201ENST00000390426 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
TRAV4-201ENST00000390426 CHAF1AQ13111 956 aaPredicted RBP13.45□□□□□ -0.26
TRAV4-201ENST00000390426 NBPF12Q5TAG4 269 aaPredicted RBP13.45□□□□□ -0.26
TRAV4-201ENST00000390426 SPRYD7Q5W111 196 aa13.45□□□□□ -0.26
TRAV4-201ENST00000390426 FBXO33Q7Z6M2 555 aa13.45□□□□□ -0.26
TRAV4-201ENST00000390426 CTU1Q7Z7A3 348 aaKnown RBP13.45□□□□□ -0.26
TRAV4-201ENST00000390426 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
TRAV4-201ENST00000390426 CLMNQ96JQ2 1002 aa13.45□□□□□ -0.26
TRAV4-201ENST00000390426 ZNF70Q9UC06 446 aaPredicted RBP13.45□□□□□ -0.26
TRAV4-201ENST00000390426 COL1A1P02452 1464 aaPredicted RBP13.44□□□□□ -0.26
TRAV4-201ENST00000390426 FRAT2O75474 233 aaPredicted RBP13.44□□□□□ -0.26
TRAV4-201ENST00000390426 RGS19P49795 217 aa13.44□□□□□ -0.26
TRAV4-201ENST00000390426 MLLT1Q03111 559 aaPredicted RBP13.44□□□□□ -0.26
TRAV4-201ENST00000390426 SREBF2Q12772 1141 aa13.44□□□□□ -0.26
TRAV4-201ENST00000390426 RASA3Q14644 834 aa13.44□□□□□ -0.26
TRAV4-201ENST00000390426 GRIK5Q16478 980 aa13.44□□□□□ -0.26
TRAV4-201ENST00000390426 SUPT20HL1Q3ZLR7 823 aa13.44□□□□□ -0.26
TRAV4-201ENST00000390426 ZNF296Q8WUU4 475 aaPredicted RBP13.44□□□□□ -0.26
TRAV4-201ENST00000390426 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
TRAV4-201ENST00000390426 SMC4Q9NTJ3 1288 aa13.44□□□□□ -0.26
TRAV4-201ENST00000390426 SSC5DA1L4H1 1573 aa13.44□□□□□ -0.26
TRAV4-201ENST00000390426 PDE8BO95263 885 aa13.43□□□□□ -0.26
TRAV4-201ENST00000390426 MAP3K11Q16584 847 aa13.43□□□□□ -0.26
TRAV4-201ENST00000390426 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
TRAV4-201ENST00000390426 CAVIN4Q5BKX8 364 aa13.43□□□□□ -0.26
TRAV4-201ENST00000390426 DZIP1LQ8IYY4 767 aaKnown RBP13.43□□□□□ -0.26
TRAV4-201ENST00000390426 VGLL2Q8N8G2 317 aa13.43□□□□□ -0.26
TRAV4-201ENST00000390426 SERPINA10Q9UK55 444 aa13.43□□□□□ -0.26
TRAV4-201ENST00000390426 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
TRAV4-201ENST00000390426 GPR25O00155 361 aa13.42□□□□□ -0.26
TRAV4-201ENST00000390426 USP2O75604 605 aaPredicted RBP13.42□□□□□ -0.26
TRAV4-201ENST00000390426 CRKP46108 304 aa13.42□□□□□ -0.26
TRAV4-201ENST00000390426 BCAMP50895 628 aa13.42□□□□□ -0.26
TRAV4-201ENST00000390426 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
TRAV4-201ENST00000390426 TRMT2AQ8IZ69 625 aaKnown RBP13.42□□□□□ -0.26
TRAV4-201ENST00000390426 WNK4Q96J92 1243 aa13.42□□□□□ -0.26
TRAV4-201ENST00000390426 R3HDMLQ9H3Y0 253 aa13.42□□□□□ -0.26
TRAV4-201ENST00000390426 IREB2P48200 963 aaKnown RBP13.41□□□□□ -0.26
TRAV4-201ENST00000390426 RFX5P48382 616 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms