RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 IL1RAPL2Q9NP60 686 aa21.66■■□□□ 1.06
CD9-202ENST00000382515 HACL1Q9UJ83 578 aa21.66■■□□□ 1.06
CD9-202ENST00000382515 ZNF609O15014 1411 aa21.65■■□□□ 1.06
CD9-202ENST00000382515 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
CD9-202ENST00000382515 APBB1O00213 710 aa21.65■■□□□ 1.06
CD9-202ENST00000382515 ARID4AP29374 1257 aaPredicted RBP21.65■■□□□ 1.06
CD9-202ENST00000382515 PHKA1P46020 1223 aa21.65■■□□□ 1.06
CD9-202ENST00000382515 GMPSP49915 693 aaPredicted RBP21.65■■□□□ 1.06
CD9-202ENST00000382515 PNMA8AQ86V59 439 aaPredicted RBP21.65■■□□□ 1.06
CD9-202ENST00000382515 ZGPATQ8N5A5 531 aaKnown RBP21.65■■□□□ 1.06
CD9-202ENST00000382515 CCDC8Q9H0W5 538 aaPredicted RBP21.65■■□□□ 1.06
CD9-202ENST00000382515 GPRC5DQ9NZD1 345 aa21.65■■□□□ 1.06
CD9-202ENST00000382515 DBNDD2Q9BQY9 259 aa21.64■■□□□ 1.05
CD9-202ENST00000382515 MRIQ9BWK5 157 aa21.64■■□□□ 1.05
CD9-202ENST00000382515 RRAGCQ9HB90 399 aa21.64■■□□□ 1.05
CD9-202ENST00000382515 CNOT7Q9UIV1 285 aaKnown RBP21.64■■□□□ 1.05
CD9-202ENST00000382515 DBNLQ9UJU6 430 aaKnown RBP21.64■■□□□ 1.05
CD9-202ENST00000382515 HDAC9Q9UKV0 1011 aa21.64■■□□□ 1.05
CD9-202ENST00000382515 USP17L8P0C7I0 530 aa21.63■■□□□ 1.05
CD9-202ENST00000382515 SCNN1DP51172 638 aa21.63■■□□□ 1.05
CD9-202ENST00000382515 TTC39AQ5SRH9 613 aa21.63■■□□□ 1.05
CD9-202ENST00000382515 FBXW7Q969H0 707 aa21.63■■□□□ 1.05
CD9-202ENST00000382515 SPEF2Q9C093 1822 aa21.62■■□□□ 1.05
CD9-202ENST00000382515 SALL1Q9NSC2 1324 aa21.62■■□□□ 1.05
CD9-202ENST00000382515 POTECB2RU33 542 aa21.62■■□□□ 1.05
CD9-202ENST00000382515 IGHDP01880 384 aa21.62■■□□□ 1.05
CD9-202ENST00000382515 MFSD14BQ5SR56 506 aa21.62■■□□□ 1.05
CD9-202ENST00000382515 ANKRD45Q5TZF3 282 aa21.62■■□□□ 1.05
CD9-202ENST00000382515 USP50Q70EL3 339 aaPredicted RBP21.62■■□□□ 1.05
CD9-202ENST00000382515 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.62■■□□□ 1.05
CD9-202ENST00000382515 ADARB2Q9NS39 739 aaKnown RBP21.62■■□□□ 1.05
CD9-202ENST00000382515 ZBTB12Q9Y330 459 aaPredicted RBP21.62■■□□□ 1.05
CD9-202ENST00000382515 ZNF280AP59817 542 aaPredicted RBP21.61■■□□□ 1.05
CD9-202ENST00000382515 SPTY2D1Q68D10 685 aaPredicted RBP21.61■■□□□ 1.05
CD9-202ENST00000382515 ZNF526Q8TF50 670 aaPredicted RBP21.61■■□□□ 1.05
CD9-202ENST00000382515 GPATCH3Q96I76 525 aa21.61■■□□□ 1.05
CD9-202ENST00000382515 TAF1DQ9H5J8 278 aaPredicted RBP21.61■■□□□ 1.05
CD9-202ENST00000382515 EPHX2P34913 555 aa21.6■■□□□ 1.05
CD9-202ENST00000382515 HDLBPQ00341 1268 aaKnown RBP21.6■■□□□ 1.05
CD9-202ENST00000382515 RASGRF1Q13972 1273 aa21.6■■□□□ 1.05
CD9-202ENST00000382515 SPATA5Q8NB90 893 aa21.6■■□□□ 1.05
CD9-202ENST00000382515 IQSEC3Q9UPP2 1182 aaPredicted RBP21.6■■□□□ 1.05
CD9-202ENST00000382515 CCDC88AQ3V6T2 1871 aa21.6■■□□□ 1.05
CD9-202ENST00000382515 EPS15P42566 896 aa21.59■■□□□ 1.05
CD9-202ENST00000382515 CHAF1AQ13111 956 aaPredicted RBP21.59■■□□□ 1.05
CD9-202ENST00000382515 TMED8Q6PL24 325 aaPredicted RBP21.59■■□□□ 1.05
CD9-202ENST00000382515 MICALL2Q8IY33 904 aa21.59■■□□□ 1.05
CD9-202ENST00000382515 C16orf71Q8IYS4 520 aaPredicted RBP21.59■■□□□ 1.05
CD9-202ENST00000382515 ZC3H15Q8WU90 426 aaKnown RBP21.59■■□□□ 1.05
CD9-202ENST00000382515 NMRK2Q9NPI5 230 aa21.59■■□□□ 1.05
CD9-202ENST00000382515 HMG20BQ9P0W2 317 aa21.59■■□□□ 1.05
CD9-202ENST00000382515 MAST3O60307 1309 aa21.58■■□□□ 1.05
CD9-202ENST00000382515 ATP5JP18859 108 aa21.58■■□□□ 1.05
CD9-202ENST00000382515 SMARCA5O60264 1052 aaPredicted RBP21.57■■□□□ 1.04
CD9-202ENST00000382515 NUCB1Q02818 461 aa21.57■■□□□ 1.04
CD9-202ENST00000382515 CERS5Q8N5B7 392 aa21.57■■□□□ 1.04
CD9-202ENST00000382515 MTMR14Q8NCE2 650 aa21.57■■□□□ 1.04
CD9-202ENST00000382515 ECHDC1Q9NTX5 307 aa21.57■■□□□ 1.04
CD9-202ENST00000382515 TLR7Q9NYK1 1049 aaKnown RBP21.57■■□□□ 1.04
CD9-202ENST00000382515 SERPINA10Q9UK55 444 aa21.57■■□□□ 1.04
CD9-202ENST00000382515 MCAMP43121 646 aa21.56■■□□□ 1.04
CD9-202ENST00000382515 CHD1LQ86WJ1 897 aa21.56■■□□□ 1.04
CD9-202ENST00000382515 KIAA0825Q8IV33 1275 aa21.56■■□□□ 1.04
CD9-202ENST00000382515 SLF2Q8IX21 1173 aa21.56■■□□□ 1.04
CD9-202ENST00000382515 TTC41PQ6P2S7 1318 aa21.55■■□□□ 1.04
CD9-202ENST00000382515 KIF3CO14782 793 aa21.55■■□□□ 1.04
CD9-202ENST00000382515 ERC2O15083 957 aa21.55■■□□□ 1.04
CD9-202ENST00000382515 TOMM70O94826 608 aa21.55■■□□□ 1.04
CD9-202ENST00000382515 LDHBP07195 334 aaKnown RBP21.55■■□□□ 1.04
CD9-202ENST00000382515 TTF1Q15361 905 aaPredicted RBP21.55■■□□□ 1.04
CD9-202ENST00000382515 MYOZ2Q9NPC6 264 aa21.55■■□□□ 1.04
CD9-202ENST00000382515 TTF2Q9UNY4 1162 aaKnown RBP21.55■■□□□ 1.04
CD9-202ENST00000382515 WDR90Q96KV7 1748 aa21.55■■□□□ 1.04
CD9-202ENST00000382515 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
CD9-202ENST00000382515 LDHDQ86WU2 507 aa21.54■■□□□ 1.04
CD9-202ENST00000382515 MXD3Q9BW11 206 aa21.54■■□□□ 1.04
CD9-202ENST00000382515 PGAP2Q9UHJ9 254 aa21.54■■□□□ 1.04
CD9-202ENST00000382515 JAG2Q9Y219 1238 aa21.54■■□□□ 1.04
CD9-202ENST00000382515 TIAM2Q8IVF5 1701 aa21.54■■□□□ 1.04
CD9-202ENST00000382515 A0A1B0GUL6 1792 aa21.53■■□□□ 1.04
CD9-202ENST00000382515 HHIPL2Q6UWX4 724 aa21.53■■□□□ 1.04
CD9-202ENST00000382515 CENPQQ7L2Z9 268 aaPredicted RBP21.53■■□□□ 1.04
CD9-202ENST00000382515 SCARF1Q14162 830 aa21.52■■□□□ 1.04
CD9-202ENST00000382515 DLGAP5Q15398 846 aa21.52■■□□□ 1.04
CD9-202ENST00000382515 B4GALNT3Q6L9W6 998 aa21.52■■□□□ 1.04
CD9-202ENST00000382515 RBM46Q8TBY0 533 aaKnown RBP21.52■■□□□ 1.04
CD9-202ENST00000382515 FAM163AQ96GL9 167 aaPredicted RBP21.52■■□□□ 1.04
CD9-202ENST00000382515 ABCF2Q9UG63 623 aa21.52■■□□□ 1.04
CD9-202ENST00000382515 STAP2Q9UGK3 403 aa21.52■■□□□ 1.04
CD9-202ENST00000382515 GLRX3O76003 335 aaKnown RBP21.51■■□□□ 1.03
CD9-202ENST00000382515 LDHCP07864 332 aa21.51■■□□□ 1.03
CD9-202ENST00000382515 GSTO1P78417 241 aa21.51■■□□□ 1.03
CD9-202ENST00000382515 KIF4BQ2VIQ3 1234 aa21.51■■□□□ 1.03
CD9-202ENST00000382515 SAMD7Q7Z3H4 446 aa21.51■■□□□ 1.03
CD9-202ENST00000382515 TEKT1Q969V4 418 aa21.51■■□□□ 1.03
CD9-202ENST00000382515 CCDC136Q96JN2 1154 aa21.51■■□□□ 1.03
CD9-202ENST00000382515 HAUS7Q99871 368 aa21.51■■□□□ 1.03
CD9-202ENST00000382515 BCL11AQ9H165 835 aa21.51■■□□□ 1.03
CD9-202ENST00000382515 LRP2BPQ9P2M1 347 aa21.51■■□□□ 1.03
CD9-202ENST00000382515 F8W031 263 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 547.3 ms