RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 RASGRF1Q13972 1273 aa18.94■□□□□ 0.62
PDGFB-202ENST00000381551 TTC39AQ5SRH9 613 aa18.94■□□□□ 0.62
PDGFB-202ENST00000381551 DACT2Q5SW24 774 aa18.94■□□□□ 0.62
PDGFB-202ENST00000381551 DPY19L2Q6NUT2 758 aa18.94■□□□□ 0.62
PDGFB-202ENST00000381551 GPC2Q8N158 579 aa18.94■□□□□ 0.62
PDGFB-202ENST00000381551 OTUD7AQ8TE49 926 aaPredicted RBP18.94■□□□□ 0.62
PDGFB-202ENST00000381551 DENND2AQ9ULE3 1009 aa18.94■□□□□ 0.62
PDGFB-202ENST00000381551 GLTPD2A6NH11 291 aa18.93■□□□□ 0.62
PDGFB-202ENST00000381551 SCARF1Q14162 830 aa18.93■□□□□ 0.62
PDGFB-202ENST00000381551 ECHDC1Q9NTX5 307 aa18.93■□□□□ 0.62
PDGFB-202ENST00000381551 HMG20BQ9P0W2 317 aa18.93■□□□□ 0.62
PDGFB-202ENST00000381551 JAG2Q9Y219 1238 aa18.93■□□□□ 0.62
PDGFB-202ENST00000381551 SALL3Q9BXA9 1300 aa18.93■□□□□ 0.62
PDGFB-202ENST00000381551 DDNO94850 711 aaPredicted RBP18.92■□□□□ 0.62
PDGFB-202ENST00000381551 ATP5JP18859 108 aa18.92■□□□□ 0.62
PDGFB-202ENST00000381551 MCAMP43121 646 aa18.92■□□□□ 0.62
PDGFB-202ENST00000381551 SPATA5Q8NB90 893 aa18.92■□□□□ 0.62
PDGFB-202ENST00000381551 GJA3Q9Y6H8 435 aa18.92■□□□□ 0.62
PDGFB-202ENST00000381551 TIAM2Q8IVF5 1701 aa18.91■□□□□ 0.62
PDGFB-202ENST00000381551 FKBP1AP62942 108 aaKnown RBP18.91■□□□□ 0.62
PDGFB-202ENST00000381551 CHAF1AQ13111 956 aaPredicted RBP18.91■□□□□ 0.62
PDGFB-202ENST00000381551 RSBN1LQ6PCB5 846 aaPredicted RBP18.91■□□□□ 0.62
PDGFB-202ENST00000381551 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDGFB-202ENST00000381551 FBXW7Q969H0 707 aa18.91■□□□□ 0.62
PDGFB-202ENST00000381551 MXD3Q9BW11 206 aa18.91■□□□□ 0.62
PDGFB-202ENST00000381551 ZBTB12Q9Y330 459 aaPredicted RBP18.91■□□□□ 0.62
PDGFB-202ENST00000381551 PDS5AQ29RF7 1337 aaKnown RBP18.91■□□□□ 0.62
PDGFB-202ENST00000381551 MX1P20591 662 aa18.9■□□□□ 0.62
PDGFB-202ENST00000381551 PI16Q6UXB8 463 aa18.9■□□□□ 0.62
PDGFB-202ENST00000381551 CERS5Q8N5B7 392 aa18.9■□□□□ 0.62
PDGFB-202ENST00000381551 WDR66Q8TBY9 1149 aa18.9■□□□□ 0.62
PDGFB-202ENST00000381551 GMLQ99445 158 aa18.9■□□□□ 0.62
PDGFB-202ENST00000381551 SNRKQ9NRH2 765 aa18.9■□□□□ 0.62
PDGFB-202ENST00000381551 STAP2Q9UGK3 403 aa18.9■□□□□ 0.62
PDGFB-202ENST00000381551 TTC41PQ6P2S7 1318 aa18.9■□□□□ 0.62
PDGFB-202ENST00000381551 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
PDGFB-202ENST00000381551 PDE4AP27815 886 aa18.89■□□□□ 0.61
PDGFB-202ENST00000381551 MFSD14BQ5SR56 506 aa18.89■□□□□ 0.61
PDGFB-202ENST00000381551 AGBL3Q8NEM8 1001 aa18.89■□□□□ 0.61
PDGFB-202ENST00000381551 TBC1D22AQ8WUA7 517 aa18.89■□□□□ 0.61
PDGFB-202ENST00000381551 DPF2Q92785 391 aa18.89■□□□□ 0.61
PDGFB-202ENST00000381551 GPATCH3Q96I76 525 aa18.89■□□□□ 0.61
PDGFB-202ENST00000381551 RPS12P25398 132 aaKnown RBP18.88■□□□□ 0.61
PDGFB-202ENST00000381551 GMPSP49915 693 aaPredicted RBP18.88■□□□□ 0.61
PDGFB-202ENST00000381551 PDE1AP54750 535 aa18.88■□□□□ 0.61
PDGFB-202ENST00000381551 TSHZ3Q63HK5 1081 aa18.88■□□□□ 0.61
PDGFB-202ENST00000381551 PLEKHM2Q8IWE5 1019 aa18.88■□□□□ 0.61
PDGFB-202ENST00000381551 BOLA2Q9H3K6 86 aa18.88■□□□□ 0.61
PDGFB-202ENST00000381551 MYO3BQ8WXR4 1341 aa18.88■□□□□ 0.61
PDGFB-202ENST00000381551 SALL1Q9NSC2 1324 aa18.88■□□□□ 0.61
PDGFB-202ENST00000381551 PSME4Q14997 1843 aa18.88■□□□□ 0.61
PDGFB-202ENST00000381551 CYP2E1P05181 493 aaPredicted RBP18.87■□□□□ 0.61
PDGFB-202ENST00000381551 ZAP70P43403 619 aa18.87■□□□□ 0.61
PDGFB-202ENST00000381551 GRIK5Q16478 980 aa18.87■□□□□ 0.61
PDGFB-202ENST00000381551 TBC1D9Q6ZT07 1266 aa18.87■□□□□ 0.61
PDGFB-202ENST00000381551 PI4K2BQ8TCG2 481 aa18.87■□□□□ 0.61
PDGFB-202ENST00000381551 L3MBTL3Q96JM7 780 aaPredicted RBP18.87■□□□□ 0.61
PDGFB-202ENST00000381551 HAUS7Q99871 368 aa18.87■□□□□ 0.61
PDGFB-202ENST00000381551 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
PDGFB-202ENST00000381551 AKAP11Q9UKA4 1901 aa18.87■□□□□ 0.61
PDGFB-202ENST00000381551 NDUFB9Q9Y6M9 179 aa18.87■□□□□ 0.61
PDGFB-202ENST00000381551 POTECB2RU33 542 aa18.86■□□□□ 0.61
PDGFB-202ENST00000381551 SCNN1DP51172 638 aa18.86■□□□□ 0.61
PDGFB-202ENST00000381551 CNOT7Q9UIV1 285 aaKnown RBP18.86■□□□□ 0.61
PDGFB-202ENST00000381551 ZNF646O15015 1829 aaPredicted RBP18.86■□□□□ 0.61
PDGFB-202ENST00000381551 ERC2O15083 957 aa18.85■□□□□ 0.61
PDGFB-202ENST00000381551 GLRX3O76003 335 aaKnown RBP18.85■□□□□ 0.61
PDGFB-202ENST00000381551 USP17L8P0C7I0 530 aa18.85■□□□□ 0.61
PDGFB-202ENST00000381551 KIAA0825Q8IV33 1275 aa18.85■□□□□ 0.61
PDGFB-202ENST00000381551 ZGPATQ8N5A5 531 aaKnown RBP18.85■□□□□ 0.61
PDGFB-202ENST00000381551 ANTXR1Q9H6X2 564 aa18.85■□□□□ 0.61
PDGFB-202ENST00000381551 GPRC5DQ9NZD1 345 aa18.85■□□□□ 0.61
PDGFB-202ENST00000381551 SUGT1Q9Y2Z0 365 aa18.85■□□□□ 0.61
PDGFB-202ENST00000381551 ABCF2Q9UG63 623 aa18.84■□□□□ 0.61
PDGFB-202ENST00000381551 GTF3C3Q9Y5Q9 886 aa18.84■□□□□ 0.61
PDGFB-202ENST00000381551 MYH13Q9UKX3 1938 aa18.83■□□□□ 0.6
PDGFB-202ENST00000381551 SHTN1A0MZ66 631 aa18.83■□□□□ 0.6
PDGFB-202ENST00000381551 F8W031 263 aaPredicted RBP18.83■□□□□ 0.6
PDGFB-202ENST00000381551 EPS15P42566 896 aa18.83■□□□□ 0.6
PDGFB-202ENST00000381551 MMP14P50281 582 aa18.83■□□□□ 0.6
PDGFB-202ENST00000381551 ZNF280AP59817 542 aaPredicted RBP18.83■□□□□ 0.6
PDGFB-202ENST00000381551 SPTY2D1Q68D10 685 aaPredicted RBP18.83■□□□□ 0.6
PDGFB-202ENST00000381551 DNAJC2Q99543 621 aaKnown RBP18.83■□□□□ 0.6
PDGFB-202ENST00000381551 RRAGCQ9HB90 399 aa18.83■□□□□ 0.6
PDGFB-202ENST00000381551 PIH1D3Q9NQM4 214 aaKnown RBP18.83■□□□□ 0.6
PDGFB-202ENST00000381551 TTF2Q9UNY4 1162 aaKnown RBP18.83■□□□□ 0.6
PDGFB-202ENST00000381551 AOX1Q06278 1338 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 H7C1D1 291 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 GOLIM4O00461 696 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 LDHBP07195 334 aaKnown RBP18.82■□□□□ 0.6
PDGFB-202ENST00000381551 PRDX5P30044 214 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 ERICH6Q7L0X2 663 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 MICALL2Q8IY33 904 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 OGFOD1Q8N543 542 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 ZNF526Q8TF50 670 aaPredicted RBP18.82■□□□□ 0.6
PDGFB-202ENST00000381551 EDC3Q96F86 508 aaKnown RBP18.82■□□□□ 0.6
PDGFB-202ENST00000381551 MRIQ9BWK5 157 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 PAG1Q9NWQ8 432 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 LRP2BPQ9P2M1 347 aa18.82■□□□□ 0.6
PDGFB-202ENST00000381551 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms