RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 PUM3Q15397 648 aaKnown RBP9.68□□□□□ -0.86
FAM49A-201ENST00000381323 ZGPATQ8N5A5 531 aaKnown RBP9.68□□□□□ -0.86
FAM49A-201ENST00000381323 CHMP4BQ9H444 224 aaKnown RBP9.68□□□□□ -0.86
FAM49A-201ENST00000381323 WBP1LQ9NX94 342 aa9.68□□□□□ -0.86
FAM49A-201ENST00000381323 KIF13BQ9NQT8 1826 aa9.68□□□□□ -0.86
FAM49A-201ENST00000381323 COL24A1Q17RW2 1714 aa9.68□□□□□ -0.86
FAM49A-201ENST00000381323 SNAP23O00161 211 aa9.68□□□□□ -0.86
FAM49A-201ENST00000381323 HIRAP54198 1017 aaPredicted RBP9.68□□□□□ -0.86
FAM49A-201ENST00000381323 DCAF15Q66K64 600 aa9.68□□□□□ -0.86
FAM49A-201ENST00000381323 WDR66Q8TBY9 1149 aa9.68□□□□□ -0.86
FAM49A-201ENST00000381323 TNRC6CQ9HCJ0 1690 aaKnown RBP9.68□□□□□ -0.86
FAM49A-201ENST00000381323 NBPF7P0C2Y1 421 aaPredicted RBP9.68□□□□□ -0.86
FAM49A-201ENST00000381323 SLFN5Q08AF3 891 aa9.68□□□□□ -0.86
FAM49A-201ENST00000381323 ZKSCAN2Q63HK3 967 aa9.68□□□□□ -0.86
FAM49A-201ENST00000381323 CCAR1Q8IX12 1150 aaKnown RBP9.68□□□□□ -0.86
FAM49A-201ENST00000381323 DEFB129Q9H1M3 183 aa9.68□□□□□ -0.86
FAM49A-201ENST00000381323 SPTY2D1Q68D10 685 aaPredicted RBP9.68□□□□□ -0.86
FAM49A-201ENST00000381323 MRPL50Q8N5N7 158 aaKnown RBP9.68□□□□□ -0.86
FAM49A-201ENST00000381323 RAI14Q9P0K7 980 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 DLG5Q8TDM6 1919 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 WNT10BO00744 389 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
FAM49A-201ENST00000381323 LDHBP07195 334 aaKnown RBP9.67□□□□□ -0.86
FAM49A-201ENST00000381323 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
FAM49A-201ENST00000381323 EYA2O00167 538 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 GNAI2P04899 355 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 CSF1RP07333 972 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 DACT2Q5SW24 774 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 LAMB4A4D0S4 1761 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 CACNA1SQ13698 1873 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 ALDH1A1P00352 501 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 CST9Q5W186 159 aa9.67□□□□□ -0.86
FAM49A-201ENST00000381323 LRRFIP2Q9Y608 721 aaKnown RBP9.67□□□□□ -0.86
FAM49A-201ENST00000381323 NUP98P52948 1817 aa9.66□□□□□ -0.86
FAM49A-201ENST00000381323 LRP2BPQ9P2M1 347 aa9.66□□□□□ -0.86
FAM49A-201ENST00000381323 BIN2Q9UBW5 565 aaPredicted RBP9.66□□□□□ -0.86
FAM49A-201ENST00000381323 LDHCP07864 332 aa9.66□□□□□ -0.86
FAM49A-201ENST00000381323 IL15P40933 162 aaPredicted RBP9.66□□□□□ -0.86
FAM49A-201ENST00000381323 CCDC158Q5M9N0 1113 aa9.66□□□□□ -0.86
FAM49A-201ENST00000381323 VIRMAQ69YN4 1812 aaKnown RBP9.66□□□□□ -0.86
FAM49A-201ENST00000381323 APBB1O00213 710 aa9.66□□□□□ -0.86
FAM49A-201ENST00000381323 LPIN2Q92539 896 aa9.66□□□□□ -0.86
FAM49A-201ENST00000381323 PUS3Q9BZE2 481 aaKnown RBP9.66□□□□□ -0.86
FAM49A-201ENST00000381323 TDRD3Q9H7E2 651 aaKnown RBP9.66□□□□□ -0.86
FAM49A-201ENST00000381323 RASA3Q14644 834 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 DLK2Q6UY11 383 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 KLHDC4Q8TBB5 520 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 PITPNM2Q9BZ72 1349 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 KDM3BQ7LBC6 1761 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 PDE8BO95263 885 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 MVPQ14764 893 aaKnown RBP9.65□□□□□ -0.86
FAM49A-201ENST00000381323 TTC39AQ5SRH9 613 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 TXNRD3Q86VQ6 643 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 HSPA8P11142 646 aaKnown RBP9.65□□□□□ -0.86
FAM49A-201ENST00000381323 ZNF280AP59817 542 aaPredicted RBP9.65□□□□□ -0.86
FAM49A-201ENST00000381323 HHIPL1Q96JK4 782 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 TAOK2Q9UL54 1235 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 DENND2AQ9ULE3 1009 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 SIPA1L3O60292 1781 aaPredicted RBP9.65□□□□□ -0.86
FAM49A-201ENST00000381323 RTL9Q8NET4 1388 aa9.65□□□□□ -0.86
FAM49A-201ENST00000381323 EGFRP00533 1210 aa9.65□□□□□ -0.87
FAM49A-201ENST00000381323 CRKP46108 304 aa9.65□□□□□ -0.87
FAM49A-201ENST00000381323 PICK1Q9NRD5 415 aa9.65□□□□□ -0.87
FAM49A-201ENST00000381323 PPP2R3BQ9Y5P8 575 aa9.65□□□□□ -0.87
FAM49A-201ENST00000381323 MANSC4A6NHS7 340 aaPredicted RBP9.64□□□□□ -0.87
FAM49A-201ENST00000381323 KLRK1P26718 216 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 BCAMP50895 628 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 CCDC88AQ3V6T2 1871 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 MOB2Q70IA6 237 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 ANKRD13AQ8IZ07 590 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 ANKRD31Q8N7Z5 1873 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 HMMRO75330 724 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 FOXO4P98177 505 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 TCP10Q12799 353 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 LRRC24Q50LG9 513 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 EPHA10Q5JZY3 1008 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 ABHD8Q96I13 439 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 NRXN2Q9P2S2 1712 aa9.64□□□□□ -0.87
FAM49A-201ENST00000381323 ASTN2O75129 1339 aaPredicted RBP9.64□□□□□ -0.87
FAM49A-201ENST00000381323 SURF6O75683 361 aaKnown RBP9.64□□□□□ -0.87
FAM49A-201ENST00000381323 COL11A2P13942 1736 aaPredicted RBP9.64□□□□□ -0.87
FAM49A-201ENST00000381323 GSTO1P78417 241 aa9.63□□□□□ -0.87
FAM49A-201ENST00000381323 PICALMQ13492 652 aa9.63□□□□□ -0.87
FAM49A-201ENST00000381323 ELP3Q9H9T3 547 aa9.63□□□□□ -0.87
FAM49A-201ENST00000381323 BCORQ6W2J9 1755 aa9.63□□□□□ -0.87
FAM49A-201ENST00000381323 INHBEP58166 350 aa9.63□□□□□ -0.87
FAM49A-201ENST00000381323 DZIP1LQ8IYY4 767 aaKnown RBP9.63□□□□□ -0.87
FAM49A-201ENST00000381323 MIER1Q8N108 512 aa9.63□□□□□ -0.87
FAM49A-201ENST00000381323 TIAM2Q8IVF5 1701 aa9.63□□□□□ -0.87
FAM49A-201ENST00000381323 CRACR2BQ8N4Y2 399 aaPredicted RBP9.63□□□□□ -0.87
FAM49A-201ENST00000381323 TMEM106CQ9BVX2 250 aa9.63□□□□□ -0.87
FAM49A-201ENST00000381323 TAF1CQ15572 869 aaPredicted RBP9.62□□□□□ -0.87
FAM49A-201ENST00000381323 WDR90Q96KV7 1748 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 OTUD5Q96G74 571 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 USP40Q9NVE5 1235 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 ZNF70Q9UC06 446 aaPredicted RBP9.62□□□□□ -0.87
FAM49A-201ENST00000381323 FKTNO75072 461 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 TBC1D8O95759 1140 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms