RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 C1QTNF8P60827 252 aa23.93■■□□□ 1.42
GTF3A-201ENST00000381140 ZNF609O15014 1411 aa23.93■■□□□ 1.42
GTF3A-201ENST00000381140 TBC1D10BQ4KMP7 808 aaPredicted RBP23.92■■□□□ 1.42
GTF3A-201ENST00000381140 SAMD7Q7Z3H4 446 aa23.92■■□□□ 1.42
GTF3A-201ENST00000381140 SMC1BQ8NDV3 1235 aa23.92■■□□□ 1.42
GTF3A-201ENST00000381140 BCL11AQ9H165 835 aa23.92■■□□□ 1.42
GTF3A-201ENST00000381140 POLR2AP24928 1970 aaKnown RBP23.92■■□□□ 1.42
GTF3A-201ENST00000381140 ADAMTSL1Q8N6G6 1762 aa23.92■■□□□ 1.42
GTF3A-201ENST00000381140 USP17L8P0C7I0 530 aa23.91■■□□□ 1.42
GTF3A-201ENST00000381140 LDHDQ86WU2 507 aa23.91■■□□□ 1.42
GTF3A-201ENST00000381140 KIAA0825Q8IV33 1275 aa23.91■■□□□ 1.42
GTF3A-201ENST00000381140 TRPM4Q8TD43 1214 aa23.91■■□□□ 1.42
GTF3A-201ENST00000381140 GMLQ99445 158 aa23.91■■□□□ 1.42
GTF3A-201ENST00000381140 MYO3BQ8WXR4 1341 aa23.91■■□□□ 1.42
GTF3A-201ENST00000381140 PHKA1P46020 1223 aa23.91■■□□□ 1.42
GTF3A-201ENST00000381140 GORABQ5T7V8 394 aa23.91■■□□□ 1.42
GTF3A-201ENST00000381140 USP50Q70EL3 339 aaPredicted RBP23.91■■□□□ 1.42
GTF3A-201ENST00000381140 XAGE2Q96GT9 111 aa23.91■■□□□ 1.42
GTF3A-201ENST00000381140 F8W031 263 aaPredicted RBP23.9■■□□□ 1.42
GTF3A-201ENST00000381140 HSP90AB4PQ58FF6 505 aa23.9■■□□□ 1.42
GTF3A-201ENST00000381140 CHADLQ6NUI6 762 aa23.9■■□□□ 1.42
GTF3A-201ENST00000381140 CERS5Q8N5B7 392 aa23.9■■□□□ 1.42
GTF3A-201ENST00000381140 GNL3LQ9NVN8 582 aaKnown RBP23.9■■□□□ 1.42
GTF3A-201ENST00000381140 FAM205AQ6ZU69 1335 aa23.9■■□□□ 1.42
GTF3A-201ENST00000381140 EGFRP00533 1210 aa23.89■■□□□ 1.41
GTF3A-201ENST00000381140 KIF4BQ2VIQ3 1234 aa23.89■■□□□ 1.41
GTF3A-201ENST00000381140 TNNI3KQ59H18 835 aa23.89■■□□□ 1.41
GTF3A-201ENST00000381140 MFSD14BQ5SR56 506 aa23.89■■□□□ 1.41
GTF3A-201ENST00000381140 ERC1Q8IUD2 1116 aa23.89■■□□□ 1.41
GTF3A-201ENST00000381140 FPGT-TNNI3KV9GXZ4 949 aa23.89■■□□□ 1.41
GTF3A-201ENST00000381140 IRX6P78412 446 aaPredicted RBP23.88■■□□□ 1.41
GTF3A-201ENST00000381140 CCDC102BQ68D86 513 aa23.88■■□□□ 1.41
GTF3A-201ENST00000381140 OGFOD1Q8N543 542 aa23.88■■□□□ 1.41
GTF3A-201ENST00000381140 PCDHB15Q9Y5E8 787 aa23.88■■□□□ 1.41
GTF3A-201ENST00000381140 HIRAP54198 1017 aaPredicted RBP23.87■■□□□ 1.41
GTF3A-201ENST00000381140 FSTL1Q12841 308 aa23.87■■□□□ 1.41
GTF3A-201ENST00000381140 MAP1SQ66K74 1059 aaPredicted RBP23.87■■□□□ 1.41
GTF3A-201ENST00000381140 IL1RAPL2Q9NP60 686 aa23.87■■□□□ 1.41
GTF3A-201ENST00000381140 ZNF280AP59817 542 aaPredicted RBP23.86■■□□□ 1.41
GTF3A-201ENST00000381140 MYOZ2Q9NPC6 264 aa23.86■■□□□ 1.41
GTF3A-201ENST00000381140 GPR108Q9NPR9 543 aa23.86■■□□□ 1.41
GTF3A-201ENST00000381140 HDAC9Q9UKV0 1011 aa23.86■■□□□ 1.41
GTF3A-201ENST00000381140 COL1A1P02452 1464 aaPredicted RBP23.85■■□□□ 1.41
GTF3A-201ENST00000381140 ERICH6BQ5W0A0 696 aa23.85■■□□□ 1.41
GTF3A-201ENST00000381140 EXOC6Q8TAG9 804 aa23.85■■□□□ 1.41
GTF3A-201ENST00000381140 RHPN1Q8TCX5 695 aa23.85■■□□□ 1.41
GTF3A-201ENST00000381140 DBNDD2Q9BQY9 259 aa23.85■■□□□ 1.41
GTF3A-201ENST00000381140 CCDC8Q9H0W5 538 aaPredicted RBP23.85■■□□□ 1.41
GTF3A-201ENST00000381140 FKBP1AP62942 108 aaKnown RBP23.84■■□□□ 1.41
GTF3A-201ENST00000381140 AACSQ86V21 672 aa23.83■■□□□ 1.41
GTF3A-201ENST00000381140 TBC1D22AQ8WUA7 517 aa23.83■■□□□ 1.41
GTF3A-201ENST00000381140 KIF1BPQ96EK5 621 aa23.83■■□□□ 1.41
GTF3A-201ENST00000381140 RAB11FIP3O75154 756 aa23.82■■□□□ 1.4
GTF3A-201ENST00000381140 CNTROBQ8N137 903 aa23.82■■□□□ 1.4
GTF3A-201ENST00000381140 EAF2Q96CJ1 260 aaPredicted RBP23.82■■□□□ 1.4
GTF3A-201ENST00000381140 TLR7Q9NYK1 1049 aaKnown RBP23.82■■□□□ 1.4
GTF3A-201ENST00000381140 DENND2AQ9ULE3 1009 aa23.82■■□□□ 1.4
GTF3A-201ENST00000381140 TTF2Q9UNY4 1162 aaKnown RBP23.82■■□□□ 1.4
GTF3A-201ENST00000381140 ASTN2O75129 1339 aaPredicted RBP23.82■■□□□ 1.4
GTF3A-201ENST00000381140 ECM29Q5VYK3 1845 aa23.81■■□□□ 1.4
GTF3A-201ENST00000381140 SEMA3EO15041 775 aa23.81■■□□□ 1.4
GTF3A-201ENST00000381140 RBM5P52756 815 aaKnown RBP eCLIP23.81■■□□□ 1.4
GTF3A-201ENST00000381140 RASGRF1Q13972 1273 aa23.81■■□□□ 1.4
GTF3A-201ENST00000381140 GRIK5Q16478 980 aa23.81■■□□□ 1.4
GTF3A-201ENST00000381140 TTC39AQ5SRH9 613 aa23.81■■□□□ 1.4
GTF3A-201ENST00000381140 WDR66Q8TBY9 1149 aa23.81■■□□□ 1.4
GTF3A-201ENST00000381140 SCARF1Q14162 830 aa23.8■■□□□ 1.4
GTF3A-201ENST00000381140 CCDC158Q5M9N0 1113 aa23.8■■□□□ 1.4
GTF3A-201ENST00000381140 DBNLQ9UJU6 430 aaKnown RBP23.8■■□□□ 1.4
GTF3A-201ENST00000381140 TRPM7Q96QT4 1865 aa23.8■■□□□ 1.4
GTF3A-201ENST00000381140 DLGAP5Q15398 846 aa23.79■■□□□ 1.4
GTF3A-201ENST00000381140 NBPF9Q3BBW0 867 aa23.79■■□□□ 1.4
GTF3A-201ENST00000381140 CLASRPQ8N2M8 674 aaKnown RBP23.79■■□□□ 1.4
GTF3A-201ENST00000381140 GGA3Q9NZ52 723 aa23.79■■□□□ 1.4
GTF3A-201ENST00000381140 AKAP11Q9UKA4 1901 aa23.79■■□□□ 1.4
GTF3A-201ENST00000381140 CFAP100Q494V2 611 aa23.78■■□□□ 1.4
GTF3A-201ENST00000381140 PI16Q6UXB8 463 aa23.78■■□□□ 1.4
GTF3A-201ENST00000381140 ZC3H15Q8WU90 426 aaKnown RBP23.78■■□□□ 1.4
GTF3A-201ENST00000381140 DCPSQ96C86 337 aaKnown RBP23.78■■□□□ 1.4
GTF3A-201ENST00000381140 GLIS2Q9BZE0 524 aaPredicted RBP23.78■■□□□ 1.4
GTF3A-201ENST00000381140 PCDHAC2Q9Y5I4 1007 aa23.78■■□□□ 1.4
GTF3A-201ENST00000381140 MYO5AQ9Y4I1 1855 aaKnown RBP23.78■■□□□ 1.4
GTF3A-201ENST00000381140 SMARCA5O60264 1052 aaPredicted RBP23.78■■□□□ 1.4
GTF3A-201ENST00000381140 UQCRFS1P1P0C7P4 283 aa23.78■■□□□ 1.4
GTF3A-201ENST00000381140 ANGEL2Q5VTE6 544 aaKnown RBP23.78■■□□□ 1.4
GTF3A-201ENST00000381140 LRRCC1Q9C099 1032 aa23.78■■□□□ 1.4
GTF3A-201ENST00000381140 DCTPP1Q9H773 170 aa23.78■■□□□ 1.4
GTF3A-201ENST00000381140 SNRKQ9NRH2 765 aa23.78■■□□□ 1.4
GTF3A-201ENST00000381140 MYH2Q9UKX2 1941 aa23.77■■□□□ 1.4
GTF3A-201ENST00000381140 TRAF5O00463 557 aa23.77■■□□□ 1.4
GTF3A-201ENST00000381140 WNT10BO00744 389 aa23.77■■□□□ 1.4
GTF3A-201ENST00000381140 ITGBL1O95965 494 aaPredicted RBP23.77■■□□□ 1.4
GTF3A-201ENST00000381140 IFIT2P09913 472 aaKnown RBP23.77■■□□□ 1.4
GTF3A-201ENST00000381140 HSPA6P17066 643 aa23.77■■□□□ 1.4
GTF3A-201ENST00000381140 ARID4AP29374 1257 aaPredicted RBP23.77■■□□□ 1.4
GTF3A-201ENST00000381140 MMP14P50281 582 aa23.77■■□□□ 1.4
GTF3A-201ENST00000381140 HMG20BQ9P0W2 317 aa23.77■■□□□ 1.4
GTF3A-201ENST00000381140 ABCF2Q9UG63 623 aa23.77■■□□□ 1.4
GTF3A-201ENST00000381140 PGAP2Q9UHJ9 254 aa23.77■■□□□ 1.4
GTF3A-201ENST00000381140 MCAMP43121 646 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms