RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 ALDH1B1P30837 517 aa9.61□□□□□ -0.87
ERCC8-202ENST00000381118 VPS53Q5VIR6 699 aa9.61□□□□□ -0.87
ERCC8-202ENST00000381118 HSCBQ8IWL3 235 aa9.61□□□□□ -0.87
ERCC8-202ENST00000381118 HELLSQ9NRZ9 838 aa9.61□□□□□ -0.87
ERCC8-202ENST00000381118 LRP2BPQ9P2M1 347 aa9.61□□□□□ -0.87
ERCC8-202ENST00000381118 ZNF219Q9P2Y4 722 aaPredicted RBP9.61□□□□□ -0.87
ERCC8-202ENST00000381118 GGA1Q9UJY5 639 aa9.61□□□□□ -0.87
ERCC8-202ENST00000381118 LEMD3Q9Y2U8 911 aa9.61□□□□□ -0.87
ERCC8-202ENST00000381118 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
ERCC8-202ENST00000381118 CCDC88AQ3V6T2 1871 aa9.61□□□□□ -0.87
ERCC8-202ENST00000381118 C6orf229H3BNL8 230 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 ZFYP08048 801 aaPredicted RBP9.6□□□□□ -0.87
ERCC8-202ENST00000381118 ADD2P35612 726 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 CHAF1AQ13111 956 aaPredicted RBP9.6□□□□□ -0.87
ERCC8-202ENST00000381118 RABEP1Q15276 862 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 MAGEB6Q8N7X4 407 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 MAP4K1Q92918 833 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 EPB41L2O43491 1005 aaKnown RBP9.6□□□□□ -0.87
ERCC8-202ENST00000381118 PDE6AP16499 860 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 MAP3K12Q12852 859 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 R3HDM1Q15032 1099 aaKnown RBP9.6□□□□□ -0.87
ERCC8-202ENST00000381118 ZSCAN25Q6NSZ9 544 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 FBXO33Q7Z6M2 555 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 APPBP2Q92624 585 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 UPF1Q92900 1129 aaKnown RBP eCLIP9.6□□□□□ -0.87
ERCC8-202ENST00000381118 UPF3BQ9BZI7 483 aaKnown RBP9.6□□□□□ -0.87
ERCC8-202ENST00000381118 POLLQ9UGP5 575 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 DENND2AQ9ULE3 1009 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 ATF5Q9Y2D1 282 aaPredicted RBP9.6□□□□□ -0.87
ERCC8-202ENST00000381118 SNX14Q9Y5W7 946 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 LTBP1Q14766 1721 aa9.6□□□□□ -0.87
ERCC8-202ENST00000381118 IRS2Q9Y4H2 1338 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 NEK4P51957 841 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 NECTIN1Q15223 517 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 ERICH6Q7L0X2 663 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 SP8Q8IXZ3 490 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 TBC1D16Q8TBP0 767 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 ATP6V0A2Q9Y487 856 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 CHD4Q14839 1912 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 RIMBP2O15034 1052 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 GPAA1O43292 621 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 HSPD1P10809 573 aaKnown RBP9.59□□□□□ -0.87
ERCC8-202ENST00000381118 ATP2B4P23634 1241 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 ANAPC15P60006 121 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 CREB3L3Q68CJ9 461 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 NOL8Q76FK4 1167 aaKnown RBP9.59□□□□□ -0.87
ERCC8-202ENST00000381118 ZNF804AQ7Z570 1209 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 SLC16A10Q8TF71 515 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 TMX4Q9H1E5 349 aaPredicted RBP9.59□□□□□ -0.87
ERCC8-202ENST00000381118 RAI14Q9P0K7 980 aa9.59□□□□□ -0.87
ERCC8-202ENST00000381118 PSDA5PKW4 1024 aaPredicted RBP9.58□□□□□ -0.88
ERCC8-202ENST00000381118 SLC27A2O14975 620 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 ST18O60284 1047 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 CPA1P15085 419 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 ZKSCAN1P17029 563 aaPredicted RBP9.58□□□□□ -0.88
ERCC8-202ENST00000381118 ADCK5Q3MIX3 580 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 TMC4Q7Z404 712 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 SLKQ9H2G2 1235 aaPredicted RBP9.58□□□□□ -0.88
ERCC8-202ENST00000381118 RNF216Q9NWF9 866 aaPredicted RBP9.58□□□□□ -0.88
ERCC8-202ENST00000381118 PODXL2Q9NZ53 605 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 TAF6LQ9Y6J9 622 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 LAMA4Q16363 1823 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 TCRBV5S4A2TA0A5A2 114 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 CASTP20810 708 aaKnown RBP9.58□□□□□ -0.88
ERCC8-202ENST00000381118 UBE3CQ15386 1083 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 DPP8Q6V1X1 898 aaPredicted RBP9.58□□□□□ -0.88
ERCC8-202ENST00000381118 MPNDQ8N594 471 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 MIGA1Q8NAN2 632 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 SNX21Q969T3 373 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 AIDAQ96BJ3 306 aa9.58□□□□□ -0.88
ERCC8-202ENST00000381118 DUOX1Q9NRD9 1551 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 DLEC1Q9Y238 1755 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 A0A0G2JLW4 131 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 SEMA3EO15041 775 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 PRDX5P30044 214 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 RNF20Q5VTR2 975 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 STYK1Q6J9G0 422 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 TICAM2Q86XR7 235 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 JAKMIP1Q96N16 626 aaKnown RBP9.57□□□□□ -0.88
ERCC8-202ENST00000381118 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
ERCC8-202ENST00000381118 C10orf71Q711Q0 1435 aa9.57□□□□□ -0.88
ERCC8-202ENST00000381118 K7ELQ4 463 aaPredicted RBP9.56□□□□□ -0.88
ERCC8-202ENST00000381118 APPP05067 770 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 CYP21A2P08686 494 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 CYP7A1P22680 504 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 ADGRA1Q86SQ6 560 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 DSCC1Q9BVC3 393 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 CD209Q9NNX6 404 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 U3KPZ7 1027 aaPredicted RBP9.56□□□□□ -0.88
ERCC8-202ENST00000381118 FOXP2O15409 715 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 MBD4O95243 580 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 HSP90AA1P07900 732 aaKnown RBP9.56□□□□□ -0.88
ERCC8-202ENST00000381118 COL9A3Q14050 684 aaPredicted RBP9.56□□□□□ -0.88
ERCC8-202ENST00000381118 TTLL5Q6EMB2 1281 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 TDRD7Q8NHU6 1098 aaKnown RBP9.56□□□□□ -0.88
ERCC8-202ENST00000381118 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
ERCC8-202ENST00000381118 CNKSR1Q969H4 720 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms