RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 USH1GQ495M9 461 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 CPLX4Q7Z7G2 160 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 CPXCR1Q8N123 301 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 ACRBPQ8NEB7 543 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 CCDC122Q5T0U0 273 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 PAGR1Q9BTK6 254 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 TBC1D7Q9P0N9 293 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 VIMP08670 466 aaKnown RBP14.01□□□□□ -0.17
CHD3-203ENST00000380358 ZNF165P49910 485 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 PARD3BQ8TEW8 1205 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 RRP36Q96EU6 259 aaKnown RBP14.01□□□□□ -0.17
CHD3-203ENST00000380358 TRIM31Q9BZY9 425 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 TXNDC9O14530 226 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 HPDP32754 393 aaPredicted RBP14.01□□□□□ -0.17
CHD3-203ENST00000380358 TCP10Q12799 353 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 ZNF804AQ7Z570 1209 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 BRF1Q92994 677 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 CCDC129Q6ZRS4 1044 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 AOPEPQ8N6M6 819 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 CYLC1P35663 651 aaPredicted RBP14.01□□□□□ -0.17
CHD3-203ENST00000380358 ANKS4BQ8N8V4 417 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 TMOD4Q9NZQ9 345 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 MAPK8IP1Q9UQF2 711 aa14.01□□□□□ -0.17
CHD3-203ENST00000380358 PI4KAP2A4QPH2 592 aa14□□□□□ -0.17
CHD3-203ENST00000380358 SPDYE2BA6NHP3 402 aa14□□□□□ -0.17
CHD3-203ENST00000380358 SPDYE6P0CI01 402 aa14□□□□□ -0.17
CHD3-203ENST00000380358 IL1RL1Q01638 556 aa14□□□□□ -0.17
CHD3-203ENST00000380358 TRPC3Q13507 836 aa14□□□□□ -0.17
CHD3-203ENST00000380358 ANO6Q4KMQ2 910 aa14□□□□□ -0.17
CHD3-203ENST00000380358 PI4KAP1Q8N8J0 262 aa14□□□□□ -0.17
CHD3-203ENST00000380358 ITIH3Q06033 890 aa14□□□□□ -0.17
CHD3-203ENST00000380358 AAMPQ13685 434 aa14□□□□□ -0.17
CHD3-203ENST00000380358 SH2D4BQ5SQS7 431 aa14□□□□□ -0.17
CHD3-203ENST00000380358 GKAP1Q5VSY0 366 aaPredicted RBP14□□□□□ -0.17
CHD3-203ENST00000380358 SDCCAG8Q86SQ7 713 aaPredicted RBP14□□□□□ -0.17
CHD3-203ENST00000380358 NEK11Q8NG66 645 aa14□□□□□ -0.17
CHD3-203ENST00000380358 SUDS3Q9H7L9 328 aaPredicted RBP14□□□□□ -0.17
CHD3-203ENST00000380358 IVNS1ABPQ9Y6Y0 642 aa14□□□□□ -0.17
CHD3-203ENST00000380358 ATP2A2P16615 1042 aaKnown RBP14□□□□□ -0.17
CHD3-203ENST00000380358 RPAP2Q8IXW5 612 aaPredicted RBP14□□□□□ -0.17
CHD3-203ENST00000380358 KIAA1524Q8TCG1 905 aa14□□□□□ -0.17
CHD3-203ENST00000380358 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
CHD3-203ENST00000380358 FNDC3AQ9Y2H6 1198 aaKnown RBP14□□□□□ -0.17
CHD3-203ENST00000380358 CCT6AP40227 531 aaKnown RBP14□□□□□ -0.17
CHD3-203ENST00000380358 STX10O60499 249 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 IGSF3O75054 1194 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 SAT1P21673 171 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 MCM5P33992 734 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 SLC8A3P57103 927 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 EVI5LQ96CN4 794 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 NBPF8Q3BBV2 869 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 NBPF14Q5TI25 921 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 RMND1Q9NWS8 449 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 SCAPERQ9BY12 1400 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 RNF217Q8TC41 542 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 ZNF131P52739 623 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 MIPOL1Q8TD10 442 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 MED10Q9BTT4 135 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 PPP1R12CQ9BZL4 782 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 CNPY2Q9Y2B0 182 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 KIF2AO00139 706 aaPredicted RBP13.99□□□□□ -0.17
CHD3-203ENST00000380358 WDR44Q5JSH3 913 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 SLC9C2Q5TAH2 1124 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 Q6ZUG5 572 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 CCDC121Q6ZUS5 278 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 TAB3Q8N5C8 712 aaPredicted RBP13.99□□□□□ -0.17
CHD3-203ENST00000380358 SH2B1Q9NRF2 756 aaPredicted RBP13.99□□□□□ -0.17
CHD3-203ENST00000380358 ERBINQ96RT1 1412 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 CTAGE5O15320 804 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 VPS18Q9P253 973 aa13.99□□□□□ -0.17
CHD3-203ENST00000380358 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 SLC4A1P02730 911 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 HCLS1P14317 486 aaPredicted RBP13.98□□□□□ -0.17
CHD3-203ENST00000380358 GTF2A1P52655 376 aaPredicted RBP13.98□□□□□ -0.17
CHD3-203ENST00000380358 PPP2R5AQ15172 486 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 GPR162Q16538 588 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 MAGED2Q9UNF1 606 aaPredicted RBP13.98□□□□□ -0.17
CHD3-203ENST00000380358 SYNJ2BP-COX16A0A087WUM0 186 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 ARID4AP29374 1257 aaPredicted RBP13.98□□□□□ -0.17
CHD3-203ENST00000380358 METTL13Q8N6R0 699 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 COX16Q9P0S2 106 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 KIF3CO14782 793 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 MSANTD4Q8NCY6 345 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 B4DLN1 442 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 MRPL12P52815 198 aaKnown RBP13.98□□□□□ -0.17
CHD3-203ENST00000380358 ZSCAN30Q86W11 494 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 SPOPO43791 374 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 METTL14Q9HCE5 456 aaKnown RBP13.98□□□□□ -0.17
CHD3-203ENST00000380358 SEPT10Q9P0V9 454 aa13.98□□□□□ -0.17
CHD3-203ENST00000380358 CTAGE15A4D2H0 777 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 CTAGE8P0CG41 777 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 CTAGE6Q86UF2 777 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 CTAGE4Q8IX94 777 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 ESR2Q92731 530 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.97□□□□□ -0.177e-7■■■■□ 21.6
CHD3-203ENST00000380358 LETM2Q2VYF4 491 aa13.97□□□□□ -0.17
CHD3-203ENST00000380358 DDX12PQ92771 950 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms