RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 KRT23Q9C075 422 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 SH3BGRP55822 239 aaPredicted RBP16.48■□□□□ 0.23
PRDM16-203ENST00000378391 FEZ1Q99689 392 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
PRDM16-203ENST00000378391 SPTLC2O15270 562 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 SLF2Q8IX21 1173 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 ACEP12821 1306 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 PNMA6EA0A0J9YXQ4 647 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 MCM6Q14566 821 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 WTAPQ15007 396 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 HOOK3Q86VS8 718 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 RAB11FIP4Q86YS3 637 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 PDLIM2Q96JY6 352 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 GRM8O00222 908 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 TUBBP07437 444 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 RRAGBQ5VZM2 374 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 GBP6Q6ZN66 633 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 LRRC2Q9BYS8 371 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 CNNM2Q9H8M5 875 aa16.48■□□□□ 0.23
PRDM16-203ENST00000378391 TSPY2A6NKD2 308 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 DTNBO60941 627 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 TCERG1LQ5VWI1 586 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 OGFRQ9NZT2 677 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 ANXA1P04083 346 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 LDHCP07864 332 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 PIP4K2BP78356 416 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 HSPA4P34932 840 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 GOLGA1Q92805 767 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 CUL5Q93034 780 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 A0A1B0GUA9 196 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 LMOD1P29536 600 aaPredicted RBP16.47■□□□□ 0.23
PRDM16-203ENST00000378391 AP1ARQ63HQ0 302 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 KSR2Q6VAB6 950 aa16.47■□□□□ 0.23
PRDM16-203ENST00000378391 CTNNBL1Q8WYA6 563 aaPredicted RBP16.46■□□□□ 0.23
PRDM16-203ENST00000378391 RASSF4Q9H2L5 321 aa16.46■□□□□ 0.23
PRDM16-203ENST00000378391 NCKAP5LQ9HCH0 1330 aa16.46■□□□□ 0.23
PRDM16-203ENST00000378391 STXBP4Q6ZWJ1 553 aa16.46■□□□□ 0.23
PRDM16-203ENST00000378391 EXOC1Q9NV70 894 aa16.46■□□□□ 0.23
PRDM16-203ENST00000378391 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRDM16-203ENST00000378391 V9GYY5 206 aaPredicted RBP16.46■□□□□ 0.23
PRDM16-203ENST00000378391 ZFYVE16Q7Z3T8 1539 aa16.46■□□□□ 0.23
PRDM16-203ENST00000378391 ATL3Q6DD88 541 aa16.46■□□□□ 0.23
PRDM16-203ENST00000378391 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
PRDM16-203ENST00000378391 CTAGE9A4FU28 777 aa16.46■□□□□ 0.22
PRDM16-203ENST00000378391 CEP83Q9Y592 693 aa16.46■□□□□ 0.22
PRDM16-203ENST00000378391 MYO1BO43795 1136 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 RGS12O14924 1447 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 RAD50Q92878 1312 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 PSMA7O14818 248 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 PRPF4BQ13523 1007 aaKnown RBP16.45■□□□□ 0.22
PRDM16-203ENST00000378391 MYCBPQ99417 103 aaPredicted RBP16.45■□□□□ 0.22
PRDM16-203ENST00000378391 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 CFAP74Q9C0B2 1584 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 GPTP24298 496 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 IL15P40933 162 aaPredicted RBP16.45■□□□□ 0.22
PRDM16-203ENST00000378391 AFMP43652 599 aa16.45■□□□□ 0.22
PRDM16-203ENST00000378391 NMIQ13287 307 aaPredicted RBP16.45■□□□□ 0.22
PRDM16-203ENST00000378391 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
PRDM16-203ENST00000378391 HMGB1P1B2RPK0 211 aaPredicted RBP16.44■□□□□ 0.22
PRDM16-203ENST00000378391 SGSM2O43147 1006 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 OPA1O60313 960 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 RTN1Q16799 776 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 ZPR1O75312 459 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 KRT83P78385 493 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 ESR2Q92731 530 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 TACC1O75410 805 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 CCDC172P0C7W6 258 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 MARCKSP29966 332 aaPredicted RBP16.44■□□□□ 0.22
PRDM16-203ENST00000378391 CREB3L3Q68CJ9 461 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 LINS1Q8NG48 757 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 AOX1Q06278 1338 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 ZNF853P0CG23 659 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 MIPOL1Q8TD10 442 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 PPP1R1BQ9UD71 204 aaPredicted RBP16.44■□□□□ 0.22
PRDM16-203ENST00000378391 MACROD2A1Z1Q3 448 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 BAG3O95817 575 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 CUL4AQ13619 759 aa16.44■□□□□ 0.22
PRDM16-203ENST00000378391 FAM135BQ49AJ0 1406 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 KIAA0753Q2KHM9 967 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 BRAPQ7Z569 592 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 ZDHHC9Q9Y397 364 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 KRT86O43790 486 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 SPAG5Q96R06 1193 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 EHMT1Q9H9B1 1298 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 KIAA0232Q92628 1395 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 CEP152O94986 1710 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 RNF216Q9NWF9 866 aaPredicted RBP16.43■□□□□ 0.22
PRDM16-203ENST00000378391 STAT6P42226 847 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 RSPH14Q9UHP6 348 aa16.43■□□□□ 0.22
PRDM16-203ENST00000378391 NEBLO76041 1014 aa16.42■□□□□ 0.22
PRDM16-203ENST00000378391 NAA25Q14CX7 972 aa16.42■□□□□ 0.22
PRDM16-203ENST00000378391 HSP90AA4PQ58FG1 418 aa16.42■□□□□ 0.22
PRDM16-203ENST00000378391 PIK3R5Q8WYR1 880 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms