RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RPL13P26373 211 aaKnown RBP11.5□□□□□ -0.57
PTCH1-204ENST00000375290 TRIM75PA6NK02 468 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 MSANTD4Q8NCY6 345 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 IPO4Q8TEX9 1081 aaKnown RBP11.5□□□□□ -0.57
PTCH1-204ENST00000375290 EVI5O60447 810 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 IL15P40933 162 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-204ENST00000375290 ZNF75DP51815 510 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 GOLGA8KD6RF30 607 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 GSTO1P78417 241 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 FYB2Q5VWT5 728 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 RNF168Q8IYW5 571 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-204ENST00000375290 SIL1Q9H173 461 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 NLRP5P59047 1200 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 CCDC14Q49A88 953 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 PLEKHM2Q8IWE5 1019 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 CNGA1P29973 690 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 TRIM37O94972 964 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 RABGGTAQ92696 567 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 RAB3IPQ96QF0 476 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-204ENST00000375290 DNAJC25Q9H1X3 360 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 RGS12O14924 1447 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 GOLGA6BA6NDN3 693 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 IDH1O75874 414 aaKnown RBP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 ZNF76P36508 570 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 MRPL50Q8N5N7 158 aaKnown RBP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 CWC25Q9NXE8 425 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 BAG3O95817 575 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 PPP1R42Q7Z4L9 355 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 FAM184BQ9ULE4 1060 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 METTL24Q5JXM2 366 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 NKIRAS1Q9NYS0 192 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 LARSQ9P2J5 1176 aaKnown RBP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 TMEM67Q5HYA8 995 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 CEP57Q86XR8 500 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 ZNF518AQ6AHZ1 1483 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 DNM1Q05193 864 aaKnown RBP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 TRIM58Q8NG06 486 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 KIAA0556O60303 1618 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 APOBRQ0VD83 1088 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 PTGS1P23219 599 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 GABPB2Q8TAK5 448 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 EXOC4Q96A65 974 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 POLR1AO95602 1720 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 WDHD1O75717 1129 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 RUNDC3BQ96NL0 473 aa11.49□□□□□ -0.57
PTCH1-204ENST00000375290 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTCH1-204ENST00000375290 GNA11P29992 359 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 PDE6BP35913 854 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 MAIP1Q8WWC4 291 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 TRPM2O94759 1503 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 UTP14AQ9BVJ6 771 aaKnown RBP11.48□□□□□ -0.57
PTCH1-204ENST00000375290 BCCIPQ9P287 314 aaKnown RBP eCLIP11.48□□□□□ -0.57
PTCH1-204ENST00000375290 RNF14Q9UBS8 474 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 BOLA2Q9H3K6 86 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 C8orf74Q6P047 294 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 WASLO00401 505 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-204ENST00000375290 CFAP221Q4G0U5 840 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 ARHGEF5Q12774 1597 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 RIOK3O14730 519 aaKnown RBP11.48□□□□□ -0.57
PTCH1-204ENST00000375290 BRD1O95696 1058 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 TMEM87BQ96K49 555 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 PHLPP2Q6ZVD8 1323 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 MAP7Q14244 749 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 ZSCAN26Q16670 478 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 THEGQ9P2T0 379 aa11.48□□□□□ -0.57
PTCH1-204ENST00000375290 PPP1R1BQ9UD71 204 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-204ENST00000375290 RBM8AQ9Y5S9 174 aaKnown RBP11.48□□□□□ -0.57
PTCH1-204ENST00000375290 ZHX3Q9H4I2 956 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 UTP11Q9Y3A2 253 aaKnown RBP11.47□□□□□ -0.57
PTCH1-204ENST00000375290 CHMLP26374 656 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 AK2P54819 239 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 WTAPQ15007 396 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 NEK11Q8NG66 645 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 UNC13AQ9UPW8 1703 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 NOP2P46087 812 aaKnown RBP11.47□□□□□ -0.57
PTCH1-204ENST00000375290 TMED8Q6PL24 325 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-204ENST00000375290 TBCAO75347 108 aaKnown RBP11.47□□□□□ -0.57
PTCH1-204ENST00000375290 RAB17Q9H0T7 212 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 CCDC151A5D8V7 595 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 FERMT2Q96AC1 680 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 ALG1Q9BT22 464 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 MKNK2Q9HBH9 465 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 FAM114A2Q9NRY5 505 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 ANAPC4Q9UJX5 808 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 FAN1Q9Y2M0 1017 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 FLT4P35916 1363 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 CIB2O75838 187 aa11.47□□□□□ -0.57
PTCH1-204ENST00000375290 ERCC3P19447 782 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 MAGEF1Q9HAY2 307 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 TRPC3Q13507 836 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 PPP1R14CQ8TAE6 165 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.57
PTCH1-204ENST00000375290 RRAGBQ5VZM2 374 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 CEP85Q6P2H3 762 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 CNNM4Q6P4Q7 775 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 RUBCNQ92622 972 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 ZBTB17Q13105 803 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 SYT10Q6XYQ8 523 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 SAMD9Q5K651 1589 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms