RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 RSBN1LQ6PCB5 846 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-202ENST00000374676 AGBL3Q8NEM8 1001 aa13.94□□□□□ -0.18
HSPG2-202ENST00000374676 DPF2Q92785 391 aa13.94□□□□□ -0.18
HSPG2-202ENST00000374676 WDR90Q96KV7 1748 aa13.94□□□□□ -0.18
HSPG2-202ENST00000374676 GMLQ99445 158 aa13.94□□□□□ -0.18
HSPG2-202ENST00000374676 DENND2AQ9ULE3 1009 aa13.94□□□□□ -0.18
HSPG2-202ENST00000374676 SCN4AP35499 1836 aa13.94□□□□□ -0.18
HSPG2-202ENST00000374676 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
HSPG2-202ENST00000374676 PDS5AQ29RF7 1337 aaKnown RBP13.93□□□□□ -0.18
HSPG2-202ENST00000374676 MYO3BQ8WXR4 1341 aa13.93□□□□□ -0.18
HSPG2-202ENST00000374676 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
HSPG2-202ENST00000374676 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
HSPG2-202ENST00000374676 TLR7Q9NYK1 1049 aaKnown RBP13.93□□□□□ -0.18
HSPG2-202ENST00000374676 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-202ENST00000374676 IQSEC3Q9UPP2 1182 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-202ENST00000374676 POTECB2RU33 542 aa13.92□□□□□ -0.18
HSPG2-202ENST00000374676 GMPSP49915 693 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-202ENST00000374676 MMP14P50281 582 aa13.92□□□□□ -0.18
HSPG2-202ENST00000374676 TTC39AQ5SRH9 613 aa13.92□□□□□ -0.18
HSPG2-202ENST00000374676 WDR66Q8TBY9 1149 aa13.92□□□□□ -0.18
HSPG2-202ENST00000374676 FBXW7Q969H0 707 aa13.92□□□□□ -0.18
HSPG2-202ENST00000374676 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-202ENST00000374676 IQCA1LA6NCM1 817 aa13.91□□□□□ -0.18
HSPG2-202ENST00000374676 SCNN1DP51172 638 aa13.91□□□□□ -0.18
HSPG2-202ENST00000374676 NUCB1Q02818 461 aa13.91□□□□□ -0.18
HSPG2-202ENST00000374676 CHAF1AQ13111 956 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-202ENST00000374676 RASGRF1Q13972 1273 aa13.91□□□□□ -0.18
HSPG2-202ENST00000374676 CERS5Q8N5B7 392 aa13.91□□□□□ -0.18
HSPG2-202ENST00000374676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.91□□□□□ -0.18
HSPG2-202ENST00000374676 GPRC5DQ9NZD1 345 aa13.91□□□□□ -0.18
HSPG2-202ENST00000374676 HMG20BQ9P0W2 317 aa13.91□□□□□ -0.18
HSPG2-202ENST00000374676 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 VEGFAP15692 232 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-202ENST00000374676 MCAMP43121 646 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 MFSD14BQ5SR56 506 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 B4GALNT3Q6L9W6 998 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 SPATA5Q8NB90 893 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 ZNF784Q8NCA9 323 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-202ENST00000374676 MXD3Q9BW11 206 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 RRAGCQ9HB90 399 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 CNOT7Q9UIV1 285 aaKnown RBP13.9□□□□□ -0.18
HSPG2-202ENST00000374676 HACL1Q9UJ83 578 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 JAG2Q9Y219 1238 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 SUGT1Q9Y2Z0 365 aa13.9□□□□□ -0.18
HSPG2-202ENST00000374676 COL1A1P02452 1464 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-202ENST00000374676 USP17L8P0C7I0 530 aa13.89□□□□□ -0.19
HSPG2-202ENST00000374676 ATP5JP18859 108 aa13.89□□□□□ -0.19
HSPG2-202ENST00000374676 LMOD1P29536 600 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-202ENST00000374676 ZNF280AP59817 542 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-202ENST00000374676 SCARF1Q14162 830 aa13.89□□□□□ -0.19
HSPG2-202ENST00000374676 CHD1LQ86WJ1 897 aa13.89□□□□□ -0.19
HSPG2-202ENST00000374676 C16orf71Q8IYS4 520 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-202ENST00000374676 ZGPATQ8N5A5 531 aaKnown RBP13.89□□□□□ -0.19
HSPG2-202ENST00000374676 BCL11AQ9H165 835 aa13.89□□□□□ -0.19
HSPG2-202ENST00000374676 GPBP1L1Q9HC44 474 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-202ENST00000374676 ECHDC1Q9NTX5 307 aa13.89□□□□□ -0.19
HSPG2-202ENST00000374676 H7C1D1 291 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 IGSF3O75054 1194 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 EPS15P42566 896 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 CENPQQ7L2Z9 268 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-202ENST00000374676 MICALL2Q8IY33 904 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 ZNF526Q8TF50 670 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-202ENST00000374676 GPATCH3Q96I76 525 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 CCDC136Q96JN2 1154 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 MRIQ9BWK5 157 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 LNPKQ9C0E8 428 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 ADARB2Q9NS39 739 aaKnown RBP13.88□□□□□ -0.19
HSPG2-202ENST00000374676 PPP4R2Q9NY27 417 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 TTC41PQ6P2S7 1318 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 SALL3Q9BXA9 1300 aa13.88□□□□□ -0.19
HSPG2-202ENST00000374676 HDLBPQ00341 1268 aaKnown RBP13.87□□□□□ -0.19
HSPG2-202ENST00000374676 SPTY2D1Q68D10 685 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-202ENST00000374676 PI16Q6UXB8 463 aa13.87□□□□□ -0.19
HSPG2-202ENST00000374676 KIAA0825Q8IV33 1275 aa13.87□□□□□ -0.19
HSPG2-202ENST00000374676 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
HSPG2-202ENST00000374676 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-202ENST00000374676 STAP2Q9UGK3 403 aa13.87□□□□□ -0.19
HSPG2-202ENST00000374676 HDAC9Q9UKV0 1011 aa13.87□□□□□ -0.19
HSPG2-202ENST00000374676 CYP2E1P05181 493 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-202ENST00000374676 MX1P20591 662 aa13.86□□□□□ -0.19
HSPG2-202ENST00000374676 EPHX2P34913 555 aa13.86□□□□□ -0.19
HSPG2-202ENST00000374676 ZAP70P43403 619 aa13.86□□□□□ -0.19
HSPG2-202ENST00000374676 GRIK5Q16478 980 aa13.86□□□□□ -0.19
HSPG2-202ENST00000374676 USP50Q70EL3 339 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-202ENST00000374676 PNMA8AQ86V59 439 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-202ENST00000374676 OTUD7AQ8TE49 926 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-202ENST00000374676 SNRKQ9NRH2 765 aa13.86□□□□□ -0.19
HSPG2-202ENST00000374676 TTF2Q9UNY4 1162 aaKnown RBP13.86□□□□□ -0.19
HSPG2-202ENST00000374676 MYO5AQ9Y4I1 1855 aaKnown RBP13.86□□□□□ -0.19
HSPG2-202ENST00000374676 SHTN1A0MZ66 631 aa13.85□□□□□ -0.19
HSPG2-202ENST00000374676 KIF3CO14782 793 aa13.85□□□□□ -0.19
HSPG2-202ENST00000374676 ERC2O15083 957 aa13.85□□□□□ -0.19
HSPG2-202ENST00000374676 LDHBP07195 334 aaKnown RBP13.85□□□□□ -0.19
HSPG2-202ENST00000374676 ERICH6Q7L0X2 663 aa13.85□□□□□ -0.19
HSPG2-202ENST00000374676 MTMR14Q8NCE2 650 aa13.85□□□□□ -0.19
HSPG2-202ENST00000374676 HAUS7Q99871 368 aa13.85□□□□□ -0.19
HSPG2-202ENST00000374676 BOLA2Q9H3K6 86 aa13.85□□□□□ -0.19
HSPG2-202ENST00000374676 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
HSPG2-202ENST00000374676 SERPINA10Q9UK55 444 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms