RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 RPS12P25398 132 aaKnown RBP18.67■□□□□ 0.58
PFDN6-202ENST00000374607 PHKA1P46020 1223 aa18.67■□□□□ 0.58
PFDN6-202ENST00000374607 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
PFDN6-202ENST00000374607 EAF2Q96CJ1 260 aaPredicted RBP18.67■□□□□ 0.58
PFDN6-202ENST00000374607 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
PFDN6-202ENST00000374607 HACL1Q9UJ83 578 aa18.67■□□□□ 0.58
PFDN6-202ENST00000374607 MYO3BQ8WXR4 1341 aa18.67■□□□□ 0.58
PFDN6-202ENST00000374607 OGFOD1Q8N543 542 aa18.66■□□□□ 0.58
PFDN6-202ENST00000374607 AGBL3Q8NEM8 1001 aa18.66■□□□□ 0.58
PFDN6-202ENST00000374607 TBC1D22AQ8WUA7 517 aa18.66■□□□□ 0.58
PFDN6-202ENST00000374607 SEMA3EO15041 775 aa18.65■□□□□ 0.58
PFDN6-202ENST00000374607 MFSD14BQ5SR56 506 aa18.65■□□□□ 0.58
PFDN6-202ENST00000374607 DACT2Q5SW24 774 aa18.65■□□□□ 0.58
PFDN6-202ENST00000374607 B4GALNT3Q6L9W6 998 aa18.65■□□□□ 0.58
PFDN6-202ENST00000374607 WDR66Q8TBY9 1149 aa18.65■□□□□ 0.58
PFDN6-202ENST00000374607 GPATCH3Q96I76 525 aa18.65■□□□□ 0.58
PFDN6-202ENST00000374607 L3MBTL3Q96JM7 780 aaPredicted RBP18.65■□□□□ 0.58
PFDN6-202ENST00000374607 NMRK2Q9NPI5 230 aa18.65■□□□□ 0.58
PFDN6-202ENST00000374607 CNOT7Q9UIV1 285 aaKnown RBP18.65■□□□□ 0.58
PFDN6-202ENST00000374607 HDAC9Q9UKV0 1011 aa18.65■□□□□ 0.58
PFDN6-202ENST00000374607 ARAP2Q8WZ64 1704 aa18.64■□□□□ 0.57
PFDN6-202ENST00000374607 F8W031 263 aaPredicted RBP18.64■□□□□ 0.57
PFDN6-202ENST00000374607 KIF3CO14782 793 aa18.64■□□□□ 0.57
PFDN6-202ENST00000374607 IGHDP01880 384 aa18.64■□□□□ 0.57
PFDN6-202ENST00000374607 DPF2Q92785 391 aa18.64■□□□□ 0.57
PFDN6-202ENST00000374607 MXD3Q9BW11 206 aa18.64■□□□□ 0.57
PFDN6-202ENST00000374607 DBNLQ9UJU6 430 aaKnown RBP18.64■□□□□ 0.57
PFDN6-202ENST00000374607 USP17L8P0C7I0 530 aa18.63■□□□□ 0.57
PFDN6-202ENST00000374607 EPHX2P34913 555 aa18.63■□□□□ 0.57
PFDN6-202ENST00000374607 EAPPQ56P03 285 aaPredicted RBP18.63■□□□□ 0.57
PFDN6-202ENST00000374607 KIAA0825Q8IV33 1275 aa18.63■□□□□ 0.57
PFDN6-202ENST00000374607 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
PFDN6-202ENST00000374607 ZGPATQ8N5A5 531 aaKnown RBP18.63■□□□□ 0.57
PFDN6-202ENST00000374607 TLR7Q9NYK1 1049 aaKnown RBP18.63■□□□□ 0.57
PFDN6-202ENST00000374607 GPRC5DQ9NZD1 345 aa18.63■□□□□ 0.57
PFDN6-202ENST00000374607 FAM205AQ6ZU69 1335 aa18.63■□□□□ 0.57
PFDN6-202ENST00000374607 SCNN1DP51172 638 aa18.62■□□□□ 0.57
PFDN6-202ENST00000374607 FKBP1AP62942 108 aaKnown RBP18.62■□□□□ 0.57
PFDN6-202ENST00000374607 RBM26Q5T8P6 1007 aaKnown RBP18.62■□□□□ 0.57
PFDN6-202ENST00000374607 CLEC11AQ9Y240 323 aa18.62■□□□□ 0.57
PFDN6-202ENST00000374607 SCN9AQ15858 1988 aa18.62■□□□□ 0.57
PFDN6-202ENST00000374607 WDR90Q96KV7 1748 aa18.61■□□□□ 0.57
PFDN6-202ENST00000374607 ARID4AP29374 1257 aaPredicted RBP18.61■□□□□ 0.57
PFDN6-202ENST00000374607 EPS15P42566 896 aa18.61■□□□□ 0.57
PFDN6-202ENST00000374607 RBM5P52756 815 aaKnown RBP eCLIP18.61■□□□□ 0.57
PFDN6-202ENST00000374607 RASGRF1Q13972 1273 aa18.61■□□□□ 0.57
PFDN6-202ENST00000374607 PNMA8AQ86V59 439 aaPredicted RBP18.61■□□□□ 0.57
PFDN6-202ENST00000374607 SPATA5Q8NB90 893 aa18.61■□□□□ 0.57
PFDN6-202ENST00000374607 CCDC136Q96JN2 1154 aa18.61■□□□□ 0.57
PFDN6-202ENST00000374607 ADARB2Q9NS39 739 aaKnown RBP18.61■□□□□ 0.57
PFDN6-202ENST00000374607 ABCF2Q9UG63 623 aa18.61■□□□□ 0.57
PFDN6-202ENST00000374607 MYH13Q9UKX3 1938 aa18.61■□□□□ 0.57
PFDN6-202ENST00000374607 SPTY2D1Q68D10 685 aaPredicted RBP18.6■□□□□ 0.57
PFDN6-202ENST00000374607 TAF1DQ9H5J8 278 aaPredicted RBP18.6■□□□□ 0.57
PFDN6-202ENST00000374607 SNRKQ9NRH2 765 aa18.6■□□□□ 0.57
PFDN6-202ENST00000374607 TTF2Q9UNY4 1162 aaKnown RBP18.6■□□□□ 0.57
PFDN6-202ENST00000374607 PSME4Q14997 1843 aa18.59■□□□□ 0.57
PFDN6-202ENST00000374607 LDHBP07195 334 aaKnown RBP18.59■□□□□ 0.57
PFDN6-202ENST00000374607 MMP14P50281 582 aa18.59■□□□□ 0.57
PFDN6-202ENST00000374607 SMC5Q8IY18 1101 aa18.59■□□□□ 0.57
PFDN6-202ENST00000374607 HMG20BQ9P0W2 317 aa18.59■□□□□ 0.57
PFDN6-202ENST00000374607 SCN4AP35499 1836 aa18.58■□□□□ 0.57
PFDN6-202ENST00000374607 MAST3O60307 1309 aa18.58■□□□□ 0.57
PFDN6-202ENST00000374607 MCAMP43121 646 aa18.58■□□□□ 0.56
PFDN6-202ENST00000374607 TBC1D10BQ4KMP7 808 aaPredicted RBP18.58■□□□□ 0.56
PFDN6-202ENST00000374607 USP50Q70EL3 339 aaPredicted RBP18.58■□□□□ 0.56
PFDN6-202ENST00000374607 DZIP1Q86YF9 867 aaKnown RBP18.58■□□□□ 0.56
PFDN6-202ENST00000374607 CERS5Q8N5B7 392 aa18.58■□□□□ 0.56
PFDN6-202ENST00000374607 ZNF512BQ96KM6 892 aaPredicted RBP18.58■□□□□ 0.56
PFDN6-202ENST00000374607 LNPKQ9C0E8 428 aa18.58■□□□□ 0.56
PFDN6-202ENST00000374607 LRP2BPQ9P2M1 347 aa18.58■□□□□ 0.56
PFDN6-202ENST00000374607 PDS5AQ29RF7 1337 aaKnown RBP18.57■□□□□ 0.56
PFDN6-202ENST00000374607 POTECB2RU33 542 aa18.57■□□□□ 0.56
PFDN6-202ENST00000374607 KIF4BQ2VIQ3 1234 aa18.57■□□□□ 0.56
PFDN6-202ENST00000374607 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
PFDN6-202ENST00000374607 SAMD7Q7Z3H4 446 aa18.57■□□□□ 0.56
PFDN6-202ENST00000374607 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
PFDN6-202ENST00000374607 GMLQ99445 158 aa18.57■□□□□ 0.56
PFDN6-202ENST00000374607 DNAJC2Q99543 621 aaKnown RBP18.57■□□□□ 0.56
PFDN6-202ENST00000374607 MYOZ2Q9NPC6 264 aa18.57■□□□□ 0.56
PFDN6-202ENST00000374607 ECHDC1Q9NTX5 307 aa18.57■□□□□ 0.56
PFDN6-202ENST00000374607 SUGT1Q9Y2Z0 365 aa18.57■□□□□ 0.56
PFDN6-202ENST00000374607 SHTN1A0MZ66 631 aa18.56■□□□□ 0.56
PFDN6-202ENST00000374607 ERC2O15083 957 aa18.56■□□□□ 0.56
PFDN6-202ENST00000374607 ZAP70P43403 619 aa18.56■□□□□ 0.56
PFDN6-202ENST00000374607 SCARF1Q14162 830 aa18.56■□□□□ 0.56
PFDN6-202ENST00000374607 DLGAP5Q15398 846 aa18.56■□□□□ 0.56
PFDN6-202ENST00000374607 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
PFDN6-202ENST00000374607 PI16Q6UXB8 463 aa18.56■□□□□ 0.56
PFDN6-202ENST00000374607 BOLA2Q9H3K6 86 aa18.56■□□□□ 0.56
PFDN6-202ENST00000374607 RAI14Q9P0K7 980 aa18.56■□□□□ 0.56
PFDN6-202ENST00000374607 SALL1Q9NSC2 1324 aa18.55■□□□□ 0.56
PFDN6-202ENST00000374607 MYO1BO43795 1136 aa18.55■□□□□ 0.56
PFDN6-202ENST00000374607 TOMM70O94826 608 aa18.55■□□□□ 0.56
PFDN6-202ENST00000374607 ZNF280AP59817 542 aaPredicted RBP18.55■□□□□ 0.56
PFDN6-202ENST00000374607 NUCB1Q02818 461 aa18.55■□□□□ 0.56
PFDN6-202ENST00000374607 TTF1Q15361 905 aaPredicted RBP18.55■□□□□ 0.56
PFDN6-202ENST00000374607 SLF2Q8IX21 1173 aa18.55■□□□□ 0.56
PFDN6-202ENST00000374607 COL1A1P02452 1464 aaPredicted RBP18.54■□□□□ 0.56
PFDN6-202ENST00000374607 ZBTB22O15209 634 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms