RNA–Protein interactions for RNA: ENST00000373899.3

TFAM-202, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 1,121 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-202ENST00000373899 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
TFAM-202ENST00000373899 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
TFAM-202ENST00000373899 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
TFAM-202ENST00000373899 ANKRD18AQ8IVF6 992 aa16.92■□□□□ 0.3
TFAM-202ENST00000373899 USP44Q9H0E7 712 aa16.92■□□□□ 0.3
TFAM-202ENST00000373899 BSDC1Q9NW68 430 aaPredicted RBP16.92■□□□□ 0.3
TFAM-202ENST00000373899 ANKIB1Q9P2G1 1089 aa16.92■□□□□ 0.3
TFAM-202ENST00000373899 MMP14P50281 582 aa16.91■□□□□ 0.3
TFAM-202ENST00000373899 SCARF1Q14162 830 aa16.91■□□□□ 0.3
TFAM-202ENST00000373899 PODNQ7Z5L7 613 aa16.91■□□□□ 0.3
TFAM-202ENST00000373899 CDC5LQ99459 802 aaKnown RBP16.91■□□□□ 0.3
TFAM-202ENST00000373899 C9orf78Q9NZ63 289 aaPredicted RBP16.91■□□□□ 0.3
TFAM-202ENST00000373899 PCDH10Q9P2E7 1040 aa16.91■□□□□ 0.3
TFAM-202ENST00000373899 MYH3P11055 1940 aa16.91■□□□□ 0.3
TFAM-202ENST00000373899 WTIPA6NIX2 430 aaPredicted RBP16.9■□□□□ 0.3
TFAM-202ENST00000373899 ITGA6P23229 1130 aa16.9■□□□□ 0.3
TFAM-202ENST00000373899 CTU1Q7Z7A3 348 aaKnown RBP16.9■□□□□ 0.3
TFAM-202ENST00000373899 ARHGAP45Q92619 1136 aa16.9■□□□□ 0.3
TFAM-202ENST00000373899 TSPYL2Q9H2G4 693 aaPredicted RBP16.9■□□□□ 0.3
TFAM-202ENST00000373899 MINPP1Q9UNW1 487 aa16.9■□□□□ 0.3
TFAM-202ENST00000373899 XDHP47989 1333 aa16.9■□□□□ 0.3
TFAM-202ENST00000373899 BCAR3O75815 825 aa16.89■□□□□ 0.29
TFAM-202ENST00000373899 ATP2B4P23634 1241 aa16.89■□□□□ 0.29
TFAM-202ENST00000373899 LMBR1LQ6UX01 489 aa16.89■□□□□ 0.29
TFAM-202ENST00000373899 MOB2Q70IA6 237 aa16.89■□□□□ 0.29
TFAM-202ENST00000373899 SUCLG2Q96I99 432 aa16.89■□□□□ 0.29
TFAM-202ENST00000373899 MYOZ2Q9NPC6 264 aa16.89■□□□□ 0.29
TFAM-202ENST00000373899 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
TFAM-202ENST00000373899 LAMB1P07942 1786 aa16.89■□□□□ 0.29
TFAM-202ENST00000373899 USP17L8P0C7I0 530 aa16.88■□□□□ 0.29
TFAM-202ENST00000373899 MS4A3Q96HJ5 214 aa16.88■□□□□ 0.29
TFAM-202ENST00000373899 USP17L3A6NCW0 530 aa16.87■□□□□ 0.29
TFAM-202ENST00000373899 USP17L4A6NCW7 530 aa16.87■□□□□ 0.29
TFAM-202ENST00000373899 RABL6Q3YEC7 729 aaPredicted RBP16.87■□□□□ 0.29
TFAM-202ENST00000373899 USP17L1Q7RTZ2 530 aa16.87■□□□□ 0.29
TFAM-202ENST00000373899 API5Q9BZZ5 524 aaKnown RBP16.87■□□□□ 0.29
TFAM-202ENST00000373899 PKN2Q16513 984 aaKnown RBP16.86■□□□□ 0.29
TFAM-202ENST00000373899 NOM1Q5C9Z4 860 aaKnown RBP16.86■□□□□ 0.29
TFAM-202ENST00000373899 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
TFAM-202ENST00000373899 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
TFAM-202ENST00000373899 ANKRD18BA2A2Z9 1011 aa16.85■□□□□ 0.29
TFAM-202ENST00000373899 IGHMBP2P38935 993 aaKnown RBP16.85■□□□□ 0.29
TFAM-202ENST00000373899 CCT4P50991 539 aaKnown RBP16.85■□□□□ 0.29
TFAM-202ENST00000373899 IFIT5Q13325 482 aaKnown RBP16.85■□□□□ 0.29
TFAM-202ENST00000373899 NBPF9Q3BBW0 867 aa16.85■□□□□ 0.29
TFAM-202ENST00000373899 DACT2Q5SW24 774 aa16.85■□□□□ 0.29
TFAM-202ENST00000373899 ANKRD44Q8N8A2 993 aa16.85■□□□□ 0.29
TFAM-202ENST00000373899 MYO3BQ8WXR4 1341 aa16.85■□□□□ 0.29
TFAM-202ENST00000373899 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
TFAM-202ENST00000373899 INTS3Q68E01 1043 aaKnown RBP16.84■□□□□ 0.29
TFAM-202ENST00000373899 ZNF296Q8WUU4 475 aaPredicted RBP16.84■□□□□ 0.29
TFAM-202ENST00000373899 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
TFAM-202ENST00000373899 MXD3Q9BW11 206 aa16.84■□□□□ 0.29
TFAM-202ENST00000373899 BICC1Q9H694 974 aaKnown RBP16.84■□□□□ 0.29
TFAM-202ENST00000373899 TNNQ9UQP3 1299 aa16.84■□□□□ 0.29
TFAM-202ENST00000373899 A0A1B0GUL6 1792 aa16.83■□□□□ 0.28
TFAM-202ENST00000373899 UBE2Q2LH0YL09 131 aa16.83■□□□□ 0.28
TFAM-202ENST00000373899 TRIM27P14373 513 aa16.83■□□□□ 0.28
TFAM-202ENST00000373899 TM4SF4P48230 202 aa16.83■□□□□ 0.28
TFAM-202ENST00000373899 STRIP1Q5VSL9 837 aa16.83■□□□□ 0.28
TFAM-202ENST00000373899 PRPF38BQ5VTL8 546 aaKnown RBP16.83■□□□□ 0.28
TFAM-202ENST00000373899 OGFOD1Q8N543 542 aa16.83■□□□□ 0.28
TFAM-202ENST00000373899 KIF16BQ96L93 1317 aa16.83■□□□□ 0.28
TFAM-202ENST00000373899 MPHOSPH8Q99549 860 aa16.83■□□□□ 0.28
TFAM-202ENST00000373899 WNT10BO00744 389 aa16.82■□□□□ 0.28
TFAM-202ENST00000373899 IPO8O15397 1037 aaKnown RBP16.82■□□□□ 0.28
TFAM-202ENST00000373899 TBC1D8O95759 1140 aa16.82■□□□□ 0.28
TFAM-202ENST00000373899 CHRNDQ07001 517 aa16.82■□□□□ 0.28
TFAM-202ENST00000373899 CCDC57Q2TAC2 916 aa16.82■□□□□ 0.28
TFAM-202ENST00000373899 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
TFAM-202ENST00000373899 CFHR5Q9BXR6 569 aa16.82■□□□□ 0.28
TFAM-202ENST00000373899 COA1Q9GZY4 146 aa16.82■□□□□ 0.28
TFAM-202ENST00000373899 LEMD3Q9Y2U8 911 aa16.82■□□□□ 0.28
TFAM-202ENST00000373899 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
TFAM-202ENST00000373899 NF2P35240 595 aa16.81■□□□□ 0.28
TFAM-202ENST00000373899 TXNRD3Q86VQ6 643 aa16.81■□□□□ 0.28
TFAM-202ENST00000373899 ZBED3Q96IU2 234 aaPredicted RBP16.81■□□□□ 0.28
TFAM-202ENST00000373899 R3HDMLQ9H3Y0 253 aa16.81■□□□□ 0.28
TFAM-202ENST00000373899 ECM29Q5VYK3 1845 aa16.81■□□□□ 0.28
TFAM-202ENST00000373899 HTTP42858 3142 aa16.81■□□□□ 0.28
TFAM-202ENST00000373899 GPR25O00155 361 aa16.8■□□□□ 0.28
TFAM-202ENST00000373899 SNAP23O00161 211 aa16.8■□□□□ 0.28
TFAM-202ENST00000373899 LDHAL6AQ6ZMR3 332 aa16.8■□□□□ 0.28
TFAM-202ENST00000373899 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
TFAM-202ENST00000373899 HELBQ8NG08 1087 aaPredicted RBP16.8■□□□□ 0.28
TFAM-202ENST00000373899 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
TFAM-202ENST00000373899 PUS3Q9BZE2 481 aaKnown RBP16.8■□□□□ 0.28
TFAM-202ENST00000373899 ANKRD2Q9GZV1 360 aa16.8■□□□□ 0.28
TFAM-202ENST00000373899 RIPOR2Q9Y4F9 1068 aa16.8■□□□□ 0.28
TFAM-202ENST00000373899 SSC5DA1L4H1 1573 aa16.8■□□□□ 0.28
TFAM-202ENST00000373899 IRS2Q9Y4H2 1338 aa16.79■□□□□ 0.28
TFAM-202ENST00000373899 TAF5LO75529 589 aa16.79■□□□□ 0.28
TFAM-202ENST00000373899 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
TFAM-202ENST00000373899 MEIS3Q99687 375 aa16.79■□□□□ 0.28
TFAM-202ENST00000373899 ZNF804BA4D1E1 1349 aa16.78■□□□□ 0.28
TFAM-202ENST00000373899 SASH1O94885 1247 aa16.78■□□□□ 0.28
TFAM-202ENST00000373899 KLRK1P26718 216 aa16.78■□□□□ 0.28
TFAM-202ENST00000373899 PTPN12Q05209 780 aaKnown RBP16.78■□□□□ 0.28
TFAM-202ENST00000373899 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
TFAM-202ENST00000373899 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms