RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 RNASE9P60153 205 aaKnown RBP10.18□□□□□ -0.78
PTPRT-206ENST00000373198 PDCD7Q8N8D1 485 aaKnown RBP10.18□□□□□ -0.78
PTPRT-206ENST00000373198 NBPF7P0C2Y1 421 aaPredicted RBP10.18□□□□□ -0.78
PTPRT-206ENST00000373198 CCT6AP40227 531 aaKnown RBP10.18□□□□□ -0.78
PTPRT-206ENST00000373198 TXNDC9O14530 226 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 CHMP2AO43633 222 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 MCM5P33992 734 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 UBXN1Q04323 297 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 FRMD4BQ9Y2L6 1034 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 KCNH5Q8NCM2 988 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 DHX58Q96C10 678 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 VGLL3A8MV65 326 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 RAB3GAP1Q15042 981 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 BSPRYQ5W0U4 402 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 CCDC171Q6TFL3 1326 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 CCDC125Q86Z20 511 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 UBE2Q2Q8WVN8 375 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 NCAPGQ9BPX3 1015 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 VCX3BQ9H321 246 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 LACTBP83111 547 aaPredicted RBP10.17□□□□□ -0.78
PTPRT-206ENST00000373198 UBE3BQ7Z3V4 1068 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 CHMP6Q96FZ7 201 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 FNBP1Q96RU3 617 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 ARFGAP3Q9NP61 516 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 MTRF1LQ9UGC7 380 aaKnown RBP10.17□□□□□ -0.78
PTPRT-206ENST00000373198 PCK1P35558 622 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 LEO1Q8WVC0 666 aaPredicted RBP10.17□□□□□ -0.78
PTPRT-206ENST00000373198 PPP1R12CQ9BZL4 782 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 PSMA7O14818 248 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 CLNS1AP54105 237 aaKnown RBP10.17□□□□□ -0.78
PTPRT-206ENST00000373198 TRPC3Q13507 836 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 PICK1Q9NRD5 415 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 ZBTB43O43298 467 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 ZNF165P49910 485 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 MYOM3Q5VTT5 1437 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 PLEKHH1Q9ULM0 1364 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 CCDC169A6NNP5 214 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 SBNO2Q9Y2G9 1366 aa10.17□□□□□ -0.78
PTPRT-206ENST00000373198 SF3A3Q12874 501 aaKnown RBP eCLIP10.17□□□□□ -0.786e-28■■■■■ 103.8
PTPRT-206ENST00000373198 NFE2L2Q16236 605 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 HS2ST1Q7LGA3 356 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 NSMCE1Q8WV22 266 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 NEMFO60524 1076 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 CETN3O15182 167 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 HPDP32754 393 aaPredicted RBP10.16□□□□□ -0.78
PTPRT-206ENST00000373198 NAA16Q6N069 864 aaPredicted RBP10.16□□□□□ -0.78
PTPRT-206ENST00000373198 SEPT8Q92599 483 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 RRP36Q96EU6 259 aaKnown RBP10.16□□□□□ -0.78
PTPRT-206ENST00000373198 C8orf37Q96NL8 207 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 NKIRAS1Q9NYS0 192 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 ATP11AP98196 1134 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 ZNF804AQ7Z570 1209 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 CTAGE1Q96RT6 745 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 INPP1P49441 399 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 ALG1Q9BT22 464 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 KLF18A0A0U1RQI7 1052 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 MGEA5O60502 916 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 ZGPATQ8N5A5 531 aaKnown RBP10.16□□□□□ -0.78
PTPRT-206ENST00000373198 RAB3IPQ96QF0 476 aaPredicted RBP10.16□□□□□ -0.78
PTPRT-206ENST00000373198 NAP1L4Q99733 375 aaKnown RBP10.16□□□□□ -0.78
PTPRT-206ENST00000373198 KRT23Q9C075 422 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 DNAI1Q9UI46 699 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 JDP2Q8WYK2 163 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
PTPRT-206ENST00000373198 TTC30BQ8N4P2 665 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 ARHGEF2Q92974 986 aaKnown RBP10.16□□□□□ -0.78
PTPRT-206ENST00000373198 MAEAQ7L5Y9 396 aa10.16□□□□□ -0.78
PTPRT-206ENST00000373198 SPOPO43791 374 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 NEDD9Q14511 834 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 RHOXF2BP0C7M4 288 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 TMPOP42166 694 aaKnown RBP10.15□□□□□ -0.78
PTPRT-206ENST00000373198 KARSQ15046 597 aaKnown RBP10.15□□□□□ -0.78
PTPRT-206ENST00000373198 PARD3BQ8TEW8 1205 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 RHOXF2Q9BQY4 288 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 GUCA1BQ9UMX6 200 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 EBAG9O00559 213 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 ATP6V1AP38606 617 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 BRDTQ58F21 947 aaPredicted RBP10.15□□□□□ -0.78
PTPRT-206ENST00000373198 SRGAP1Q7Z6B7 1085 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 EVI5LQ96CN4 794 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 UIMC1Q96RL1 719 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 BAG1Q99933 345 aaPredicted RBP10.15□□□□□ -0.78
PTPRT-206ENST00000373198 RIOK1Q9BRS2 568 aaKnown RBP10.15□□□□□ -0.78
PTPRT-206ENST00000373198 DDX19AQ9NUU7 478 aaKnown RBP10.15□□□□□ -0.78
PTPRT-206ENST00000373198 RILPL1Q5EBL4 403 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 CCDC62Q6P9F0 684 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 GIMAP6Q6P9H5 292 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 BUB1BO60566 1050 aaPredicted RBP10.15□□□□□ -0.78
PTPRT-206ENST00000373198 MORC4Q8TE76 937 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 ESR2Q92731 530 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 SPATA17Q96L03 361 aa10.15□□□□□ -0.78
PTPRT-206ENST00000373198 ESYT2A0FGR8 921 aa10.15□□□□□ -0.79
PTPRT-206ENST00000373198 TMOD4Q9NZQ9 345 aa10.15□□□□□ -0.79
PTPRT-206ENST00000373198 LCA5Q86VQ0 697 aa10.15□□□□□ -0.79
PTPRT-206ENST00000373198 RABEP2Q9H5N1 569 aa10.15□□□□□ -0.79
PTPRT-206ENST00000373198 RPS6KA2Q15349 733 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 TNPO1Q92973 898 aaKnown RBP10.14□□□□□ -0.79
PTPRT-206ENST00000373198 CCDC42Q96M95 316 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 NSD3Q9BZ95 1437 aa10.14□□□□□ -0.79
PTPRT-206ENST00000373198 KIF21BO75037 1637 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms