RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 SCNN1DP51172 638 aa19.57■□□□□ 0.72
PFDN4-201ENST00000371419 DPF2Q92785 391 aa19.57■□□□□ 0.72
PFDN4-201ENST00000371419 CCDC136Q96JN2 1154 aa19.57■□□□□ 0.72
PFDN4-201ENST00000371419 B4GALNT3Q6L9W6 998 aa19.56■□□□□ 0.72
PFDN4-201ENST00000371419 AACSQ86V21 672 aa19.56■□□□□ 0.72
PFDN4-201ENST00000371419 AGBL3Q8NEM8 1001 aa19.56■□□□□ 0.72
PFDN4-201ENST00000371419 DBNDD2Q9BQY9 259 aa19.56■□□□□ 0.72
PFDN4-201ENST00000371419 HACL1Q9UJ83 578 aa19.56■□□□□ 0.72
PFDN4-201ENST00000371419 MYO3BQ8WXR4 1341 aa19.56■□□□□ 0.72
PFDN4-201ENST00000371419 POTECB2RU33 542 aa19.55■□□□□ 0.72
PFDN4-201ENST00000371419 SEMA3EO15041 775 aa19.55■□□□□ 0.72
PFDN4-201ENST00000371419 ZBTB22O15209 634 aa19.55■□□□□ 0.72
PFDN4-201ENST00000371419 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
PFDN4-201ENST00000371419 GPRC5DQ9NZD1 345 aa19.55■□□□□ 0.72
PFDN4-201ENST00000371419 DBNLQ9UJU6 430 aaKnown RBP19.55■□□□□ 0.72
PFDN4-201ENST00000371419 JAG2Q9Y219 1238 aa19.55■□□□□ 0.72
PFDN4-201ENST00000371419 FKBP1AP62942 108 aaKnown RBP19.54■□□□□ 0.72
PFDN4-201ENST00000371419 CHAF1AQ13111 956 aaPredicted RBP19.54■□□□□ 0.72
PFDN4-201ENST00000371419 GCC1Q96CN9 775 aa19.54■□□□□ 0.72
PFDN4-201ENST00000371419 GMLQ99445 158 aa19.54■□□□□ 0.72
PFDN4-201ENST00000371419 MXD3Q9BW11 206 aa19.54■□□□□ 0.72
PFDN4-201ENST00000371419 SCN4AP35499 1836 aa19.54■□□□□ 0.72
PFDN4-201ENST00000371419 CCDC158Q5M9N0 1113 aa19.54■□□□□ 0.72
PFDN4-201ENST00000371419 BCL11AQ9H165 835 aa19.54■□□□□ 0.72
PFDN4-201ENST00000371419 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
PFDN4-201ENST00000371419 CNOT7Q9UIV1 285 aaKnown RBP19.54■□□□□ 0.72
PFDN4-201ENST00000371419 DENND2AQ9ULE3 1009 aa19.54■□□□□ 0.72
PFDN4-201ENST00000371419 ZNF646O15015 1829 aaPredicted RBP19.53■□□□□ 0.72
PFDN4-201ENST00000371419 H7C1D1 291 aa19.53■□□□□ 0.72
PFDN4-201ENST00000371419 IFIT2P09913 472 aaKnown RBP19.53■□□□□ 0.72
PFDN4-201ENST00000371419 UQCRFS1P1P0C7P4 283 aa19.53■□□□□ 0.72
PFDN4-201ENST00000371419 EPS15P42566 896 aa19.53■□□□□ 0.72
PFDN4-201ENST00000371419 TBC1D22AQ8WUA7 517 aa19.53■□□□□ 0.72
PFDN4-201ENST00000371419 TAF1DQ9H5J8 278 aaPredicted RBP19.53■□□□□ 0.72
PFDN4-201ENST00000371419 SMARCA5O60264 1052 aaPredicted RBP19.52■□□□□ 0.72
PFDN4-201ENST00000371419 IGHDP01880 384 aa19.52■□□□□ 0.72
PFDN4-201ENST00000371419 ARID4AP29374 1257 aaPredicted RBP19.52■□□□□ 0.72
PFDN4-201ENST00000371419 EPHX2P34913 555 aa19.52■□□□□ 0.72
PFDN4-201ENST00000371419 MFSD14BQ5SR56 506 aa19.52■□□□□ 0.72
PFDN4-201ENST00000371419 TTC39AQ5SRH9 613 aa19.52■□□□□ 0.72
PFDN4-201ENST00000371419 MICALL2Q8IY33 904 aa19.52■□□□□ 0.72
PFDN4-201ENST00000371419 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
PFDN4-201ENST00000371419 WDR66Q8TBY9 1149 aa19.52■□□□□ 0.72
PFDN4-201ENST00000371419 KIF3CO14782 793 aa19.51■□□□□ 0.71
PFDN4-201ENST00000371419 USP17L8P0C7I0 530 aa19.51■□□□□ 0.71
PFDN4-201ENST00000371419 RASGRF1Q13972 1273 aa19.51■□□□□ 0.71
PFDN4-201ENST00000371419 ADARB2Q9NS39 739 aaKnown RBP19.51■□□□□ 0.71
PFDN4-201ENST00000371419 PDS5AQ29RF7 1337 aaKnown RBP19.51■□□□□ 0.71
PFDN4-201ENST00000371419 COL1A1P02452 1464 aaPredicted RBP19.5■□□□□ 0.71
PFDN4-201ENST00000371419 MMP14P50281 582 aa19.5■□□□□ 0.71
PFDN4-201ENST00000371419 KIAA0825Q8IV33 1275 aa19.5■□□□□ 0.71
PFDN4-201ENST00000371419 C16orf71Q8IYS4 520 aaPredicted RBP19.5■□□□□ 0.71
PFDN4-201ENST00000371419 OGFOD1Q8N543 542 aa19.5■□□□□ 0.71
PFDN4-201ENST00000371419 ZNF512BQ96KM6 892 aaPredicted RBP19.5■□□□□ 0.71
PFDN4-201ENST00000371419 ZBTB47Q9UFB7 747 aaPredicted RBP19.5■□□□□ 0.71
PFDN4-201ENST00000371419 MYH13Q9UKX3 1938 aa19.5■□□□□ 0.71
PFDN4-201ENST00000371419 SHTN1A0MZ66 631 aa19.49■□□□□ 0.71
PFDN4-201ENST00000371419 ZNF280AP59817 542 aaPredicted RBP19.49■□□□□ 0.71
PFDN4-201ENST00000371419 ANKRD45Q5TZF3 282 aa19.49■□□□□ 0.71
PFDN4-201ENST00000371419 PNMA8AQ86V59 439 aaPredicted RBP19.49■□□□□ 0.71
PFDN4-201ENST00000371419 SMC5Q8IY18 1101 aa19.49■□□□□ 0.71
PFDN4-201ENST00000371419 HMG20BQ9P0W2 317 aa19.49■□□□□ 0.71
PFDN4-201ENST00000371419 USP50Q70EL3 339 aaPredicted RBP19.48■□□□□ 0.71
PFDN4-201ENST00000371419 SPATA5Q8NB90 893 aa19.48■□□□□ 0.71
PFDN4-201ENST00000371419 HDAC9Q9UKV0 1011 aa19.48■□□□□ 0.71
PFDN4-201ENST00000371419 MCAMP43121 646 aa19.48■□□□□ 0.71
PFDN4-201ENST00000371419 SCARF1Q14162 830 aa19.48■□□□□ 0.71
PFDN4-201ENST00000371419 SUGT1Q9Y2Z0 365 aa19.48■□□□□ 0.71
PFDN4-201ENST00000371419 SALL1Q9NSC2 1324 aa19.47■□□□□ 0.71
PFDN4-201ENST00000371419 F8W031 263 aaPredicted RBP19.47■□□□□ 0.71
PFDN4-201ENST00000371419 EAPPQ56P03 285 aaPredicted RBP19.47■□□□□ 0.71
PFDN4-201ENST00000371419 SAMD7Q7Z3H4 446 aa19.47■□□□□ 0.71
PFDN4-201ENST00000371419 ZGPATQ8N5A5 531 aaKnown RBP19.47■□□□□ 0.71
PFDN4-201ENST00000371419 TBC1D10BQ4KMP7 808 aaPredicted RBP19.46■□□□□ 0.71
PFDN4-201ENST00000371419 RBM26Q5T8P6 1007 aaKnown RBP19.46■□□□□ 0.71
PFDN4-201ENST00000371419 PI16Q6UXB8 463 aa19.46■□□□□ 0.71
PFDN4-201ENST00000371419 TRPM4Q8TD43 1214 aa19.46■□□□□ 0.71
PFDN4-201ENST00000371419 MYOZ2Q9NPC6 264 aa19.46■□□□□ 0.71
PFDN4-201ENST00000371419 TTF2Q9UNY4 1162 aaKnown RBP19.46■□□□□ 0.71
PFDN4-201ENST00000371419 GRIK5Q16478 980 aa19.45■□□□□ 0.7
PFDN4-201ENST00000371419 KIF4BQ2VIQ3 1234 aa19.45■□□□□ 0.7
PFDN4-201ENST00000371419 SNRKQ9NRH2 765 aa19.45■□□□□ 0.7
PFDN4-201ENST00000371419 TOMM70O94826 608 aa19.44■□□□□ 0.7
PFDN4-201ENST00000371419 EGFRP00533 1210 aa19.44■□□□□ 0.7
PFDN4-201ENST00000371419 LDHBP07195 334 aaKnown RBP19.44■□□□□ 0.7
PFDN4-201ENST00000371419 LDHDQ86WU2 507 aa19.44■□□□□ 0.7
PFDN4-201ENST00000371419 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.44■□□□□ 0.7
PFDN4-201ENST00000371419 ABCF2Q9UG63 623 aa19.44■□□□□ 0.7
PFDN4-201ENST00000371419 MAST3O60307 1309 aa19.44■□□□□ 0.7
PFDN4-201ENST00000371419 POTEIP0CG38 1075 aa19.43■□□□□ 0.7
PFDN4-201ENST00000371419 POTEJP0CG39 1038 aa19.43■□□□□ 0.7
PFDN4-201ENST00000371419 HIRAP54198 1017 aaPredicted RBP19.43■□□□□ 0.7
PFDN4-201ENST00000371419 SPTY2D1Q68D10 685 aaPredicted RBP19.43■□□□□ 0.7
PFDN4-201ENST00000371419 GPATCH3Q96I76 525 aa19.43■□□□□ 0.7
PFDN4-201ENST00000371419 TSHZ2Q9NRE2 1034 aa19.43■□□□□ 0.7
PFDN4-201ENST00000371419 ECHDC1Q9NTX5 307 aa19.43■□□□□ 0.7
PFDN4-201ENST00000371419 CLEC11AQ9Y240 323 aa19.43■□□□□ 0.7
PFDN4-201ENST00000371419 AKAP11Q9UKA4 1901 aa19.43■□□□□ 0.7
PFDN4-201ENST00000371419 ATP5JP18859 108 aa19.42■□□□□ 0.7
PFDN4-201ENST00000371419 PRDX5P30044 214 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms