RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 GRIK5Q16478 980 aa13.83□□□□□ -0.2
EXOSC1-202ENST00000370885 TDRD7Q8NHU6 1098 aaKnown RBP13.83□□□□□ -0.2
EXOSC1-202ENST00000370885 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
EXOSC1-202ENST00000370885 MYO3BQ8WXR4 1341 aa13.83□□□□□ -0.2
EXOSC1-202ENST00000370885 PITPNM2Q9BZ72 1349 aa13.83□□□□□ -0.2
EXOSC1-202ENST00000370885 F8W031 263 aaPredicted RBP13.82□□□□□ -0.2
EXOSC1-202ENST00000370885 CT47B1P0C2W7 299 aaPredicted RBP13.82□□□□□ -0.2
EXOSC1-202ENST00000370885 MAP2K2P36507 400 aa13.82□□□□□ -0.2
EXOSC1-202ENST00000370885 PTPN12Q05209 780 aaKnown RBP13.82□□□□□ -0.2
EXOSC1-202ENST00000370885 RGMBQ6NW40 437 aa13.82□□□□□ -0.2
EXOSC1-202ENST00000370885 ZNF804AQ7Z570 1209 aa13.82□□□□□ -0.2
EXOSC1-202ENST00000370885 PRDM10Q9NQV6 1147 aa13.82□□□□□ -0.2
EXOSC1-202ENST00000370885 BCAR3O75815 825 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 ATG9AQ7Z3C6 839 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 FBXO33Q7Z6M2 555 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 OGFOD1Q8N543 542 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 C2orf69Q8N8R5 385 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 AIDAQ96BJ3 306 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 PRMT6Q96LA8 375 aaPredicted RBP13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 MEIS3Q99687 375 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 FZD1Q9UP38 647 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 IQSEC3Q9UPP2 1182 aaPredicted RBP13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 FAM205AQ6ZU69 1335 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 MROH5Q6ZUA9 1318 aa13.81□□□□□ -0.2
EXOSC1-202ENST00000370885 UBE2Q2LH0YL09 131 aa13.8□□□□□ -0.2
EXOSC1-202ENST00000370885 PDE8BO95263 885 aa13.8□□□□□ -0.2
EXOSC1-202ENST00000370885 FGFR2P21802 821 aa13.8□□□□□ -0.2
EXOSC1-202ENST00000370885 HIBADHP31937 336 aaKnown RBP13.8□□□□□ -0.2
EXOSC1-202ENST00000370885 METTL24Q5JXM2 366 aa13.8□□□□□ -0.2
EXOSC1-202ENST00000370885 PAPPA2Q9BXP8 1791 aa13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 CAPN15O75808 1086 aa13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 BCAMP50895 628 aa13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 ZNF157P51786 506 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 FKBP1AP62942 108 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 KIF23Q02241 960 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 CFAP100Q494V2 611 aa13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 SSC5DA1L4H1 1573 aa13.79□□□□□ -0.2
EXOSC1-202ENST00000370885 ECM29Q5VYK3 1845 aa13.78□□□□□ -0.2
EXOSC1-202ENST00000370885 EYA2O00167 538 aa13.78□□□□□ -0.2
EXOSC1-202ENST00000370885 SLC10A3P09131 477 aa13.78□□□□□ -0.2
EXOSC1-202ENST00000370885 RASAL3Q86YV0 1011 aa13.78□□□□□ -0.2
EXOSC1-202ENST00000370885 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
EXOSC1-202ENST00000370885 HDAC9Q9UKV0 1011 aa13.78□□□□□ -0.2
EXOSC1-202ENST00000370885 PA2G4Q9UQ80 394 aaKnown RBP13.78□□□□□ -0.2
EXOSC1-202ENST00000370885 CLRN2A0PK11 232 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 TRIM27P14373 513 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 NOGQ13253 232 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 DLGAP5Q15398 846 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 MFSD14BQ5SR56 506 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 INTS3Q68E01 1043 aaKnown RBP13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 ARAP2Q8WZ64 1704 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 CSRNP1Q96S65 589 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 SIL1Q9H173 461 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 CASP8AP2Q9UKL3 1982 aa13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-202ENST00000370885 COL1A1P02452 1464 aaPredicted RBP13.76□□□□□ -0.21
EXOSC1-202ENST00000370885 MMP14P50281 582 aa13.76□□□□□ -0.21
EXOSC1-202ENST00000370885 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
EXOSC1-202ENST00000370885 PRKG1Q13976 671 aa13.76□□□□□ -0.21
EXOSC1-202ENST00000370885 CDAN1Q8IWY9 1227 aa13.76□□□□□ -0.21
EXOSC1-202ENST00000370885 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
EXOSC1-202ENST00000370885 DEFB129Q9H1M3 183 aa13.76□□□□□ -0.21
EXOSC1-202ENST00000370885 FKBP1BP68106 108 aa13.75□□□□□ -0.21
EXOSC1-202ENST00000370885 CHAF1AQ13111 956 aaPredicted RBP13.75□□□□□ -0.21
EXOSC1-202ENST00000370885 TTF2Q9UNY4 1162 aaKnown RBP13.75□□□□□ -0.21
EXOSC1-202ENST00000370885 PUM3Q15397 648 aaKnown RBP13.74□□□□□ -0.21
EXOSC1-202ENST00000370885 LDLRAD1Q5T700 205 aa13.74□□□□□ -0.21
EXOSC1-202ENST00000370885 APOBEC3FQ8IUX4 373 aaKnown RBP13.74□□□□□ -0.21
EXOSC1-202ENST00000370885 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
EXOSC1-202ENST00000370885 TDRD3Q9H7E2 651 aaKnown RBP13.74□□□□□ -0.21
EXOSC1-202ENST00000370885 KIF16BQ96L93 1317 aa13.73□□□□□ -0.21
EXOSC1-202ENST00000370885 CRKP46108 304 aa13.73□□□□□ -0.21
EXOSC1-202ENST00000370885 NBPF12Q5TAG4 269 aaPredicted RBP13.73□□□□□ -0.21
EXOSC1-202ENST00000370885 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
EXOSC1-202ENST00000370885 FRAT1Q92837 279 aaPredicted RBP13.73□□□□□ -0.21
EXOSC1-202ENST00000370885 BEGAINQ9BUH8 593 aa13.73□□□□□ -0.21
EXOSC1-202ENST00000370885 RNF186Q9NXI6 227 aa13.73□□□□□ -0.21
EXOSC1-202ENST00000370885 ZNF70Q9UC06 446 aaPredicted RBP13.73□□□□□ -0.21
EXOSC1-202ENST00000370885 SERPINA10Q9UK55 444 aa13.73□□□□□ -0.21
EXOSC1-202ENST00000370885 TRPA1O75762 1119 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 CIAO1O76071 339 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 ADORA1P30542 326 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 RBM5P52756 815 aaKnown RBP eCLIP13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 MKRN3Q13064 507 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 TTLL12Q14166 644 aaPredicted RBP13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 RASA3Q14644 834 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 CAVIN4Q5BKX8 364 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 VPS37DQ86XT2 251 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 DZIP1LQ8IYY4 767 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 TMEM57Q8N5G2 664 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 LPIN2Q92539 896 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 CLMNQ96JQ2 1002 aa13.72□□□□□ -0.21
EXOSC1-202ENST00000370885 TEPSINQ96N21 525 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms