RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 KRT26Q7Z3Y9 468 aa25.66■■□□□ 1.7
SMNDC1-201ENST00000369592 GGA3Q9NZ52 723 aa25.66■■□□□ 1.7
SMNDC1-201ENST00000369592 PITPNM2Q9BZ72 1349 aa25.65■■□□□ 1.7
SMNDC1-201ENST00000369592 RLBP1P12271 317 aa25.65■■□□□ 1.7
SMNDC1-201ENST00000369592 VEGFBP49765 207 aa25.65■■□□□ 1.7
SMNDC1-201ENST00000369592 TLL2Q9Y6L7 1015 aa25.65■■□□□ 1.7
SMNDC1-201ENST00000369592 ARAP2Q8WZ64 1704 aa25.65■■□□□ 1.7
SMNDC1-201ENST00000369592 KIAA0825Q8IV33 1275 aa25.64■■□□□ 1.7
SMNDC1-201ENST00000369592 FBXW7Q969H0 707 aa25.64■■□□□ 1.7
SMNDC1-201ENST00000369592 DCPSQ96C86 337 aaKnown RBP25.64■■□□□ 1.7
SMNDC1-201ENST00000369592 ADM5C9JUS6 153 aa25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 WNT10BO00744 389 aa25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 CELF2O95319 508 aaKnown RBP25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 PUM3Q15397 648 aaKnown RBP25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 DEFB115Q30KQ5 88 aa25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 NBPF9Q3BBW0 867 aa25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 ANGEL2Q5VTE6 544 aaKnown RBP25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 OGFOD1Q8N543 542 aa25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 MTMR14Q8NCE2 650 aa25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 ABHD8Q96I13 439 aa25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 PA2G4Q9UQ80 394 aaKnown RBP25.63■■□□□ 1.69
SMNDC1-201ENST00000369592 SAPCD2Q86UD0 394 aa25.62■■□□□ 1.69
SMNDC1-201ENST00000369592 WBP1LQ9NX94 342 aa25.62■■□□□ 1.69
SMNDC1-201ENST00000369592 THSD7BQ9C0I4 1608 aa25.62■■□□□ 1.69
SMNDC1-201ENST00000369592 ECM29Q5VYK3 1845 aa25.61■■□□□ 1.69
SMNDC1-201ENST00000369592 GNAI2P04899 355 aa25.61■■□□□ 1.69
SMNDC1-201ENST00000369592 HHIPL1Q96JK4 782 aa25.61■■□□□ 1.69
SMNDC1-201ENST00000369592 IL15P40933 162 aaPredicted RBP25.6■■□□□ 1.69
SMNDC1-201ENST00000369592 DZIP1LQ8IYY4 767 aaKnown RBP25.6■■□□□ 1.69
SMNDC1-201ENST00000369592 LPIN2Q92539 896 aa25.6■■□□□ 1.69
SMNDC1-201ENST00000369592 SIL1Q9H173 461 aa25.6■■□□□ 1.69
SMNDC1-201ENST00000369592 ABT1Q9ULW3 272 aaKnown RBP25.6■■□□□ 1.69
SMNDC1-201ENST00000369592 ZBTB22O15209 634 aa25.59■■□□□ 1.69
SMNDC1-201ENST00000369592 SRGAP3O43295 1099 aa25.59■■□□□ 1.69
SMNDC1-201ENST00000369592 BCAMP50895 628 aa25.59■■□□□ 1.69
SMNDC1-201ENST00000369592 SULF1Q8IWU6 871 aa25.59■■□□□ 1.69
SMNDC1-201ENST00000369592 HDAC9Q9UKV0 1011 aa25.59■■□□□ 1.69
SMNDC1-201ENST00000369592 JAG2Q9Y219 1238 aa25.59■■□□□ 1.69
SMNDC1-201ENST00000369592 ZBTB7BO15156 539 aaPredicted RBP25.58■■□□□ 1.69
SMNDC1-201ENST00000369592 IFIT1P09914 478 aaKnown RBP25.58■■□□□ 1.69
SMNDC1-201ENST00000369592 PNMA6EA0A0J9YXQ4 647 aa25.57■■□□□ 1.68
SMNDC1-201ENST00000369592 HSPA8P11142 646 aaKnown RBP25.57■■□□□ 1.68
SMNDC1-201ENST00000369592 CAVIN4Q5BKX8 364 aa25.57■■□□□ 1.68
SMNDC1-201ENST00000369592 CEP126Q9P2H0 1117 aa25.57■■□□□ 1.68
SMNDC1-201ENST00000369592 MFSD14BQ5SR56 506 aa25.56■■□□□ 1.68
SMNDC1-201ENST00000369592 CDCA5Q96FF9 252 aa25.56■■□□□ 1.68
SMNDC1-201ENST00000369592 PCDHAC2Q9Y5I4 1007 aa25.56■■□□□ 1.68
SMNDC1-201ENST00000369592 MYH13Q9UKX3 1938 aa25.56■■□□□ 1.68
SMNDC1-201ENST00000369592 WDR33Q9C0J8 1336 aaKnown RBP25.56■■□□□ 1.68
SMNDC1-201ENST00000369592 SLC5A1P13866 664 aa25.55■■□□□ 1.68
SMNDC1-201ENST00000369592 POLA2Q14181 598 aa25.55■■□□□ 1.68
SMNDC1-201ENST00000369592 GRIK5Q16478 980 aa25.55■■□□□ 1.68
SMNDC1-201ENST00000369592 ZNF408Q9H9D4 720 aa25.55■■□□□ 1.68
SMNDC1-201ENST00000369592 ATP2B3Q16720 1220 aa25.54■■□□□ 1.68
SMNDC1-201ENST00000369592 FTSJ3Q8IY81 847 aaKnown RBP25.54■■□□□ 1.68
SMNDC1-201ENST00000369592 IQSEC3Q9UPP2 1182 aaPredicted RBP25.54■■□□□ 1.68
SMNDC1-201ENST00000369592 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.54■■□□□ 1.68
SMNDC1-201ENST00000369592 AOX1Q06278 1338 aa25.54■■□□□ 1.68
SMNDC1-201ENST00000369592 COL1A1P02452 1464 aaPredicted RBP25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 SPDYE2BA6NHP3 402 aa25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 SPDYE6P0CI01 402 aa25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 DLGAP5Q15398 846 aa25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 CFAP100Q494V2 611 aa25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 VPS37DQ86XT2 251 aa25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 SSH3Q8TE77 659 aa25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 CAPNS2Q96L46 248 aa25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 PRMT6Q96LA8 375 aaPredicted RBP25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 GBA2Q9HCG7 927 aaPredicted RBP25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 SCAF8Q9UPN6 1271 aaKnown RBP25.53■■□□□ 1.68
SMNDC1-201ENST00000369592 F8W031 263 aaPredicted RBP25.52■■□□□ 1.68
SMNDC1-201ENST00000369592 ATP8B2P98198 1209 aa25.52■■□□□ 1.68
SMNDC1-201ENST00000369592 CYP4F22Q6NT55 531 aa25.52■■□□□ 1.68
SMNDC1-201ENST00000369592 PANK1Q8TE04 598 aa25.52■■□□□ 1.68
SMNDC1-201ENST00000369592 TBC1D22AQ8WUA7 517 aa25.52■■□□□ 1.68
SMNDC1-201ENST00000369592 ITPRIPQ8IWB1 547 aa25.51■■□□□ 1.67
SMNDC1-201ENST00000369592 SERPINA10Q9UK55 444 aa25.51■■□□□ 1.67
SMNDC1-201ENST00000369592 PAPPA2Q9BXP8 1791 aa25.51■■□□□ 1.67
SMNDC1-201ENST00000369592 ECE1P42892 770 aa25.5■■□□□ 1.67
SMNDC1-201ENST00000369592 MLLT1Q03111 559 aaPredicted RBP25.5■■□□□ 1.67
SMNDC1-201ENST00000369592 MRIQ9BWK5 157 aa25.5■■□□□ 1.67
SMNDC1-201ENST00000369592 RCAN3Q9UKA8 241 aa25.5■■□□□ 1.67
SMNDC1-201ENST00000369592 TTF2Q9UNY4 1162 aaKnown RBP25.5■■□□□ 1.67
SMNDC1-201ENST00000369592 HUNKP57058 714 aa25.49■■□□□ 1.67
SMNDC1-201ENST00000369592 HDLBPQ00341 1268 aaKnown RBP25.49■■□□□ 1.67
SMNDC1-201ENST00000369592 TFCP2Q12800 502 aa25.49■■□□□ 1.67
SMNDC1-201ENST00000369592 APOBEC3FQ8IUX4 373 aaKnown RBP25.49■■□□□ 1.67
SMNDC1-201ENST00000369592 C2orf69Q8N8R5 385 aa25.49■■□□□ 1.67
SMNDC1-201ENST00000369592 PCDH10Q9P2E7 1040 aa25.49■■□□□ 1.67
SMNDC1-201ENST00000369592 SUGT1Q9Y2Z0 365 aa25.49■■□□□ 1.67
SMNDC1-201ENST00000369592 CCDC85CA6NKD9 419 aa25.48■■□□□ 1.67
SMNDC1-201ENST00000369592 ADORA1P30542 326 aa25.48■■□□□ 1.67
SMNDC1-201ENST00000369592 FKBP1BP68106 108 aa25.48■■□□□ 1.67
SMNDC1-201ENST00000369592 MAP2K1Q02750 393 aaPredicted RBP25.48■■□□□ 1.67
SMNDC1-201ENST00000369592 CHAF1AQ13111 956 aaPredicted RBP25.48■■□□□ 1.67
SMNDC1-201ENST00000369592 PHKA1P46020 1223 aa25.47■■□□□ 1.67
SMNDC1-201ENST00000369592 TIMM10P62072 90 aa25.47■■□□□ 1.67
SMNDC1-201ENST00000369592 PRAMEF18Q5VWM3 479 aa25.47■■□□□ 1.67
SMNDC1-201ENST00000369592 C1orf115Q9H7X2 142 aa25.47■■□□□ 1.67
SMNDC1-201ENST00000369592 FAM155AB1AL88 458 aaPredicted RBP25.46■■□□□ 1.67
SMNDC1-201ENST00000369592 MS4A1P11836 297 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms