RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
PMF1-202ENST00000368277 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
PMF1-202ENST00000368277 HDAC9Q9UKV0 1011 aa17.15■□□□□ 0.34
PMF1-202ENST00000368277 ZNF521Q96K83 1311 aa17.15■□□□□ 0.34
PMF1-202ENST00000368277 CLRN2A0PK11 232 aa17.14■□□□□ 0.33
PMF1-202ENST00000368277 NBPF7P0C2Y1 421 aaPredicted RBP17.14■□□□□ 0.33
PMF1-202ENST00000368277 CCDC57Q2TAC2 916 aa17.14■□□□□ 0.33
PMF1-202ENST00000368277 LDHAL6AQ6ZMR3 332 aa17.14■□□□□ 0.33
PMF1-202ENST00000368277 SRCIN1Q9C0H9 1055 aa17.14■□□□□ 0.33
PMF1-202ENST00000368277 SAGE1Q9NXZ1 904 aa17.14■□□□□ 0.33
PMF1-202ENST00000368277 FKBP1BP68106 108 aa17.13■□□□□ 0.33
PMF1-202ENST00000368277 PTPN12Q05209 780 aaKnown RBP17.13■□□□□ 0.33
PMF1-202ENST00000368277 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
PMF1-202ENST00000368277 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
PMF1-202ENST00000368277 IL1R1P14778 569 aa17.12■□□□□ 0.33
PMF1-202ENST00000368277 GYG1P46976 350 aa17.12■□□□□ 0.33
PMF1-202ENST00000368277 DLGAP5Q15398 846 aa17.12■□□□□ 0.33
PMF1-202ENST00000368277 CFAP100Q494V2 611 aa17.12■□□□□ 0.33
PMF1-202ENST00000368277 C15orf52Q6ZUT6 534 aaKnown RBP17.12■□□□□ 0.33
PMF1-202ENST00000368277 APOBEC3FQ8IUX4 373 aaKnown RBP17.12■□□□□ 0.33
PMF1-202ENST00000368277 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
PMF1-202ENST00000368277 TNRC18O15417 2968 aaPredicted RBP17.11■□□□□ 0.33
PMF1-202ENST00000368277 TBC1D8O95759 1140 aa17.11■□□□□ 0.33
PMF1-202ENST00000368277 NF2P35240 595 aa17.11■□□□□ 0.33
PMF1-202ENST00000368277 ANGEL1Q9UNK9 670 aaKnown RBP17.11■□□□□ 0.33
PMF1-202ENST00000368277 KLHDC4Q8TBB5 520 aa17.1■□□□□ 0.33
PMF1-202ENST00000368277 PRMT6Q96LA8 375 aaPredicted RBP17.1■□□□□ 0.33
PMF1-202ENST00000368277 BICC1Q9H694 974 aaKnown RBP17.1■□□□□ 0.33
PMF1-202ENST00000368277 VEZTQ9HBM0 779 aa17.1■□□□□ 0.33
PMF1-202ENST00000368277 IQSEC3Q9UPP2 1182 aaPredicted RBP17.1■□□□□ 0.33
PMF1-202ENST00000368277 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
PMF1-202ENST00000368277 LRRC24Q50LG9 513 aa17.09■□□□□ 0.33
PMF1-202ENST00000368277 ANKRD44Q8N8A2 993 aa17.09■□□□□ 0.33
PMF1-202ENST00000368277 DEFB129Q9H1M3 183 aa17.09■□□□□ 0.33
PMF1-202ENST00000368277 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
PMF1-202ENST00000368277 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
PMF1-202ENST00000368277 RBM5P52756 815 aaKnown RBP eCLIP17.08■□□□□ 0.32
PMF1-202ENST00000368277 SOX10P56693 466 aa17.08■□□□□ 0.32
PMF1-202ENST00000368277 GRIK5Q16478 980 aa17.08■□□□□ 0.32
PMF1-202ENST00000368277 ARMC9Q7Z3E5 817 aa17.08■□□□□ 0.32
PMF1-202ENST00000368277 SSH1Q8WYL5 1049 aa17.08■□□□□ 0.32
PMF1-202ENST00000368277 CLMNQ96JQ2 1002 aa17.08■□□□□ 0.32
PMF1-202ENST00000368277 R3HDMLQ9H3Y0 253 aa17.08■□□□□ 0.32
PMF1-202ENST00000368277 MLLT1Q03111 559 aaPredicted RBP17.07■□□□□ 0.32
PMF1-202ENST00000368277 NBPF12Q5TAG4 269 aaPredicted RBP17.07■□□□□ 0.32
PMF1-202ENST00000368277 CDAN1Q8IWY9 1227 aa17.07■□□□□ 0.32
PMF1-202ENST00000368277 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
PMF1-202ENST00000368277 AK9Q5TCS8 1911 aa17.07■□□□□ 0.32
PMF1-202ENST00000368277 UTYO14607 1347 aa17.06■□□□□ 0.32
PMF1-202ENST00000368277 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
PMF1-202ENST00000368277 MTMR14Q8NCE2 650 aa17.06■□□□□ 0.32
PMF1-202ENST00000368277 TDRD7Q8NHU6 1098 aaKnown RBP17.06■□□□□ 0.32
PMF1-202ENST00000368277 ZNF296Q8WUU4 475 aaPredicted RBP17.06■□□□□ 0.32
PMF1-202ENST00000368277 FAM84BQ96KN1 310 aaPredicted RBP17.06■□□□□ 0.32
PMF1-202ENST00000368277 TTF2Q9UNY4 1162 aaKnown RBP17.06■□□□□ 0.32
PMF1-202ENST00000368277 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
PMF1-202ENST00000368277 FAM205AQ6ZU69 1335 aa17.05■□□□□ 0.32
PMF1-202ENST00000368277 HIBADHP31937 336 aaKnown RBP17.05■□□□□ 0.32
PMF1-202ENST00000368277 RGS19P49795 217 aa17.05■□□□□ 0.32
PMF1-202ENST00000368277 FKBP1AP62942 108 aaKnown RBP17.05■□□□□ 0.32
PMF1-202ENST00000368277 CHAF1AQ13111 956 aaPredicted RBP17.05■□□□□ 0.32
PMF1-202ENST00000368277 UBE4AQ14139 1066 aa17.05■□□□□ 0.32
PMF1-202ENST00000368277 LDLRAD1Q5T700 205 aa17.05■□□□□ 0.32
PMF1-202ENST00000368277 SPRYD7Q5W111 196 aa17.05■□□□□ 0.32
PMF1-202ENST00000368277 CTU1Q7Z7A3 348 aaKnown RBP17.05■□□□□ 0.32
PMF1-202ENST00000368277 TDRD3Q9H7E2 651 aaKnown RBP17.05■□□□□ 0.32
PMF1-202ENST00000368277 TM4SF4P48230 202 aa17.04■□□□□ 0.32
PMF1-202ENST00000368277 MMP14P50281 582 aa17.04■□□□□ 0.32
PMF1-202ENST00000368277 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
PMF1-202ENST00000368277 RABL6Q3YEC7 729 aaPredicted RBP17.04■□□□□ 0.32
PMF1-202ENST00000368277 METTL24Q5JXM2 366 aa17.04■□□□□ 0.32
PMF1-202ENST00000368277 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
PMF1-202ENST00000368277 ZSWIM8A7E2V4 1837 aa17.03■□□□□ 0.32
PMF1-202ENST00000368277 MROH5Q6ZUA9 1318 aa17.03■□□□□ 0.32
PMF1-202ENST00000368277 MYO1BO43795 1136 aa17.03■□□□□ 0.32
PMF1-202ENST00000368277 RASA3Q14644 834 aa17.03■□□□□ 0.32
PMF1-202ENST00000368277 WNK4Q96J92 1243 aa17.03■□□□□ 0.32
PMF1-202ENST00000368277 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
PMF1-202ENST00000368277 PTPRCP08575 1304 aa17.02■□□□□ 0.32
PMF1-202ENST00000368277 PDE4DIPQ5VU43 2346 aa17.02■□□□□ 0.32
PMF1-202ENST00000368277 E9PSI1 815 aa17.02■□□□□ 0.32
PMF1-202ENST00000368277 GPR25O00155 361 aa17.02■□□□□ 0.32
PMF1-202ENST00000368277 GJA5P36382 358 aa17.02■□□□□ 0.32
PMF1-202ENST00000368277 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
PMF1-202ENST00000368277 VGLL2Q8N8G2 317 aa17.02■□□□□ 0.32
PMF1-202ENST00000368277 USP44Q9H0E7 712 aa17.02■□□□□ 0.32
PMF1-202ENST00000368277 TCP10L2B9ZVM9 353 aa17.01■□□□□ 0.31
PMF1-202ENST00000368277 CRKP46108 304 aa17.01■□□□□ 0.31
PMF1-202ENST00000368277 CACNB3P54284 484 aa17.01■□□□□ 0.31
PMF1-202ENST00000368277 SREBF2Q12772 1141 aa17.01■□□□□ 0.31
PMF1-202ENST00000368277 SLC10A4Q96EP9 437 aa17.01■□□□□ 0.31
PMF1-202ENST00000368277 HPS5Q9UPZ3 1129 aa17.01■□□□□ 0.31
PMF1-202ENST00000368277 PPP2R3BQ9Y5P8 575 aa17.01■□□□□ 0.31
PMF1-202ENST00000368277 IGF2BP3O00425 579 aaKnown RBP eCLIP17■□□□□ 0.31
PMF1-202ENST00000368277 PPP1R12BO60237 982 aaPredicted RBP17■□□□□ 0.31
PMF1-202ENST00000368277 USP2O75604 605 aaPredicted RBP17■□□□□ 0.31
PMF1-202ENST00000368277 BCAMP50895 628 aa17■□□□□ 0.31
PMF1-202ENST00000368277 MAP3K11Q16584 847 aa17■□□□□ 0.31
PMF1-202ENST00000368277 FBXO33Q7Z6M2 555 aa17■□□□□ 0.31
PMF1-202ENST00000368277 VPS37DQ86XT2 251 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms